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The map label for this gene is yxjC [H]

Identifier: 187929858

GI number: 187929858

Start: 2900063

End: 2901463

Strand: Reverse

Name: yxjC [H]

Synonym: Rpic_2789

Alternate gene names: 187929858

Gene position: 2901463-2900063 (Counterclockwise)

Preceding gene: 187929859

Following gene: 187929857

Centisome position: 73.59

GC content: 64.17

Gene sequence:

>1401_bases
ATGTCCGTCATCATCGTGCTGGCTGCGCTGGCGTTCCTGATGTTCGCCGCGTATCGCGGCTACAGCGTCATCCTATTTGC
ACCACTGGCCGCACTCGGCGCGGTGCTGTTGACCGATCCATCGGCTGTGGCGCCGGTGTTCTCCGGCATCTTCATGGAGA
AGATGGTCGGCTTCGTCAAACTATATTTCCCTGTGTTTCTGCTCGGTGCCGTGTTCGGCAAGGTGATCGAGCTGTCGGGC
TTTTCGCGCTCGATCGTCGCGTCGGTCATCCGCGTGGTGGGGGCCAAGCGGGCGATGCTTTCCATCGTGCTGGTGTGCGC
GCTGCTGACGTACGGGGGCGTGTCGCTGTTCGTGGTGGTGTTTGCGGTGTACCCGTTTGCAGCGGAAATGTTCCGCCAGG
GCAACATCCCCAAGCGCCTCATCCCGGGCACGATCGCGCTGGGCGCGTTCTCGTTCACGATGGATTCGCTGCCGGGCACG
CCCCAGATTCAAAACATCATCCCGACCACGTTCTTCCACACCACCTCTTGGGCCGCGCCGTGGCTGGGTACCATCGGGGC
GCTGTTCATCATCGTGGTGGGCATGTCGTATTTGGAATGGCGCCGCCGCGTAGCGCTGCGCAATGGCCATGGCTATGACC
ACGGCCTGACCAAGCTGGTGAACGAGCCCGAAACCGCCGAGACGGGCACGCTCGCGCATCCGCTCGTCGCGCTGTCGCCG
CTGGTGCTGGTGGGCGTGATGAACCTGGTGTTCACGCGCTGGATTCCAGCGTGGTACGGCAAGGTCGTCACCGTTGCGTT
GCCCGGCCTGCCCAAGCCGCTCACGGTTGAAGCCGACAAGCTGACCGCGATCTGGGCCGTGGAGGCCGCGCTGTTGATCG
GCATCATCGTGGTGCTGGTGTTCGGCTTCCGCGCTGTGAAGGGCCGCTTTGCTGAAGGCAGCAAGGCGGCGGTGTCGGGC
GCGCTGCTGGCCGCAATGAACACCGCTTCGGAATACGGTTTCGGTGGCGTGATTGCCACGCTGCCGGGTTTCCTGGTGCT
GGCCGAGGGTCTGCGCGCGATCCCGAACCCGCTCGTCAATGAAGCAGTGACGGTGAGCACGCTTGCAGGTATCACCGGTT
CCGCGTCGGGCGGCATGAGCATCGCGCTGGCGGCAATGGCCGATCAGTTCGTGCAGGCCGCGCAGGCGACGGGTATTCCG
ATGGAGGTGCTGCACCGTGTGGCGGCGATGGCCTCGGGCGGCATGGACACGCTGCCGCACAATGGCGCCGTGATCACGCT
GCTGGCTGTCACGGGCCTGACGCACCGCGAAGCGTACCGCGATGTGTTCTGCGTGACGATCATCAAGACACTGGCCGTGT
TCTTCGTGATTGCCGTGTTCTACGCCACCGGCATCGTCTGA

Upstream 100 bases:

>100_bases
TCCGCCGCCAGTTCAATACGCGTGATTGCGTAACGGAATCTGCTGCATCGCGACATACAATCCTTCGCTCTTAAAAGAAA
AGCATGCGAGGAGATTGTCG

Downstream 100 bases:

>100_bases
CGCAGACGCTGCCGCAATGAAAAAAGCCGACGCGCAAACGTCGGCTTTTTTTCATGGGCGTGACCCGTCCTGAATAAGGT
TGACACTTTTTCCCCGCCAG

Product: Citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MSVIIVLAALAFLMFAAYRGYSVILFAPLAALGAVLLTDPSAVAPVFSGIFMEKMVGFVKLYFPVFLLGAVFGKVIELSG
FSRSIVASVIRVVGAKRAMLSIVLVCALLTYGGVSLFVVVFAVYPFAAEMFRQGNIPKRLIPGTIALGAFSFTMDSLPGT
PQIQNIIPTTFFHTTSWAAPWLGTIGALFIIVVGMSYLEWRRRVALRNGHGYDHGLTKLVNEPETAETGTLAHPLVALSP
LVLVGVMNLVFTRWIPAWYGKVVTVALPGLPKPLTVEADKLTAIWAVEAALLIGIIVVLVFGFRAVKGRFAEGSKAAVSG
ALLAAMNTASEYGFGGVIATLPGFLVLAEGLRAIPNPLVNEAVTVSTLAGITGSASGGMSIALAAMADQFVQAAQATGIP
MEVLHRVAAMASGGMDTLPHNGAVITLLAVTGLTHREAYRDVFCVTIIKTLAVFFVIAVFYATGIV

Sequences:

>Translated_466_residues
MSVIIVLAALAFLMFAAYRGYSVILFAPLAALGAVLLTDPSAVAPVFSGIFMEKMVGFVKLYFPVFLLGAVFGKVIELSG
FSRSIVASVIRVVGAKRAMLSIVLVCALLTYGGVSLFVVVFAVYPFAAEMFRQGNIPKRLIPGTIALGAFSFTMDSLPGT
PQIQNIIPTTFFHTTSWAAPWLGTIGALFIIVVGMSYLEWRRRVALRNGHGYDHGLTKLVNEPETAETGTLAHPLVALSP
LVLVGVMNLVFTRWIPAWYGKVVTVALPGLPKPLTVEADKLTAIWAVEAALLIGIIVVLVFGFRAVKGRFAEGSKAAVSG
ALLAAMNTASEYGFGGVIATLPGFLVLAEGLRAIPNPLVNEAVTVSTLAGITGSASGGMSIALAAMADQFVQAAQATGIP
MEVLHRVAAMASGGMDTLPHNGAVITLLAVTGLTHREAYRDVFCVTIIKTLAVFFVIAVFYATGIV
>Mature_465_residues
SVIIVLAALAFLMFAAYRGYSVILFAPLAALGAVLLTDPSAVAPVFSGIFMEKMVGFVKLYFPVFLLGAVFGKVIELSGF
SRSIVASVIRVVGAKRAMLSIVLVCALLTYGGVSLFVVVFAVYPFAAEMFRQGNIPKRLIPGTIALGAFSFTMDSLPGTP
QIQNIIPTTFFHTTSWAAPWLGTIGALFIIVVGMSYLEWRRRVALRNGHGYDHGLTKLVNEPETAETGTLAHPLVALSPL
VLVGVMNLVFTRWIPAWYGKVVTVALPGLPKPLTVEADKLTAIWAVEAALLIGIIVVLVFGFRAVKGRFAEGSKAAVSGA
LLAAMNTASEYGFGGVIATLPGFLVLAEGLRAIPNPLVNEAVTVSTLAGITGSASGGMSIALAAMADQFVQAAQATGIPM
EVLHRVAAMASGGMDTLPHNGAVITLLAVTGLTHREAYRDVFCVTIIKTLAVFFVIAVFYATGIV

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 49095; Mature: 48964

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVIIVLAALAFLMFAAYRGYSVILFAPLAALGAVLLTDPSAVAPVFSGIFMEKMVGFVK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH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CCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377; 10568751 [H]