| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929819
Identifier: 187929819
GI number: 187929819
Start: 2861592
End: 2862380
Strand: Reverse
Name: 187929819
Synonym: Rpic_2750
Alternate gene names: NA
Gene position: 2862380-2861592 (Counterclockwise)
Preceding gene: 187929820
Following gene: 187929818
Centisome position: 72.6
GC content: 56.15
Gene sequence:
>789_bases ATGGGCTCGACTCCCACACCCAACGACATCAATTCGCAGAACAGAGAGTTCTGGGCGAATCAGGATCACATCGGCAGGTA CGGTGACGCGATCGCGGCCGCCACTGATGCCCTGATGAAATATGACACGTATGGGCACGGTCGCTTTGTGTGGCTAGCTT ACAAGAGCGTCCGAGTTGCGGAAAGGCTCTGGCCGGCCTATCGGGAAGCGATGATTGCCTACGTCAGTACCTGGGGAAAT GGGCAGGAAGTTAGGTTATCCACAGAGGTGTTGGACACCCTGCGAGAGCGAGTCCTGTGCATCCTGGATGGTGTTGTTGG GGATCTTCTGGATCTGGGCGATACGAGCAGCAAACACGGGCACGCCGCCGTCAAGAAAGCGCTTAGGATCGATGCGGAAA ATTCCCCCACTAGTTCCAAAGCTCGCACGCTTGAAGAAGCAATCATCGAGGGGATGATCGCCATTTACCGCCAAGCATCA GTGCTGCAGGAAAGGTTCGCGCGCGGGGAGTCATCCTTTAGCGTGCGACCCCCAGCCGCCGCAGATCACATCAAGCGGTT GGTGGCAAATAACACCGGGGTGAGCATTTCTCAGGTTGATGCAACCTGGCGCAAATATCTATCAGAGGGTGAACATGCGG ACGACTGCAAGGCACTGATTCAGCAGGTCAAGGAACAAGACAAGGCACTTCGGCGCAAGGTAGTGCCAAAGCTGAAAGCA GCGGTCAAGCGGCCCCAGAAACCAACGGCGGATCACCGCTGGCGGAGAACTGTGAGGACGAAAATTTAG
Upstream 100 bases:
>100_bases TAACGGTAACAGCCGCGCCTAGATCGGCCAATCGAAAACGGGTTCTCTCACCCGCTGGCGCTGCTCTCTTTTTCGAGGGA CTTTGCGTGAGGGCGCAAGG
Downstream 100 bases:
>100_bases AAACCCTCCCTGTTTTCTAAATATTTTTTCTTAATGCAAACAGTTCCGCAGAGCTTCGGGATGGTCCCGAGGCAGCCGAC GGAGCTTTTGCATGACCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MGSTPTPNDINSQNREFWANQDHIGRYGDAIAAATDALMKYDTYGHGRFVWLAYKSVRVAERLWPAYREAMIAYVSTWGN GQEVRLSTEVLDTLRERVLCILDGVVGDLLDLGDTSSKHGHAAVKKALRIDAENSPTSSKARTLEEAIIEGMIAIYRQAS VLQERFARGESSFSVRPPAAADHIKRLVANNTGVSISQVDATWRKYLSEGEHADDCKALIQQVKEQDKALRRKVVPKLKA AVKRPQKPTADHRWRRTVRTKI
Sequences:
>Translated_262_residues MGSTPTPNDINSQNREFWANQDHIGRYGDAIAAATDALMKYDTYGHGRFVWLAYKSVRVAERLWPAYREAMIAYVSTWGN GQEVRLSTEVLDTLRERVLCILDGVVGDLLDLGDTSSKHGHAAVKKALRIDAENSPTSSKARTLEEAIIEGMIAIYRQAS VLQERFARGESSFSVRPPAAADHIKRLVANNTGVSISQVDATWRKYLSEGEHADDCKALIQQVKEQDKALRRKVVPKLKA AVKRPQKPTADHRWRRTVRTKI >Mature_261_residues GSTPTPNDINSQNREFWANQDHIGRYGDAIAAATDALMKYDTYGHGRFVWLAYKSVRVAERLWPAYREAMIAYVSTWGNG QEVRLSTEVLDTLRERVLCILDGVVGDLLDLGDTSSKHGHAAVKKALRIDAENSPTSSKARTLEEAIIEGMIAIYRQASV LQERFARGESSFSVRPPAAADHIKRLVANNTGVSISQVDATWRKYLSEGEHADDCKALIQQVKEQDKALRRKVVPKLKAA VKRPQKPTADHRWRRTVRTKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29383; Mature: 29251
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSTPTPNDINSQNREFWANQDHIGRYGDAIAAATDALMKYDTYGHGRFVWLAYKSVRVA CCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHH ERLWPAYREAMIAYVSTWGNGQEVRLSTEVLDTLRERVLCILDGVVGDLLDLGDTSSKHG HHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH HAAVKKALRIDAENSPTSSKARTLEEAIIEGMIAIYRQASVLQERFARGESSFSVRPPAA HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH ADHIKRLVANNTGVSISQVDATWRKYLSEGEHADDCKALIQQVKEQDKALRRKVVPKLKA HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVKRPQKPTADHRWRRTVRTKI HHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure GSTPTPNDINSQNREFWANQDHIGRYGDAIAAATDALMKYDTYGHGRFVWLAYKSVRVA CCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHH ERLWPAYREAMIAYVSTWGNGQEVRLSTEVLDTLRERVLCILDGVVGDLLDLGDTSSKHG HHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH HAAVKKALRIDAENSPTSSKARTLEEAIIEGMIAIYRQASVLQERFARGESSFSVRPPAA HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH ADHIKRLVANNTGVSISQVDATWRKYLSEGEHADDCKALIQQVKEQDKALRRKVVPKLKA HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVKRPQKPTADHRWRRTVRTKI HHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA