| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929816
Identifier: 187929816
GI number: 187929816
Start: 2860492
End: 2860953
Strand: Reverse
Name: 187929816
Synonym: Rpic_2747
Alternate gene names: NA
Gene position: 2860953-2860492 (Counterclockwise)
Preceding gene: 187929817
Following gene: 187929815
Centisome position: 72.57
GC content: 61.47
Gene sequence:
>462_bases ATGAGCAGACGAGCCACCACTGCCAAAGCCAAGCGGGACGGAGCAGGCGGCGCCATTCTGTTGATTCCGCACACGGTGAT CGACAGCCCGGCATTTGTCACGCTCTCGGCCAACGGCGTCAAGCTGCTGATCGACATGGCCGCGCAGTACAACACCCGGA ACAACGGCGCCTTGCTTTGCTCCTGGCGCTACATGAGCGAGAAACGCGGCTGGAAATCGCCGGACACACTGAACCGCGCG CGACAGGAGCTGATCGATCGGGGTTTGATCGTCCAGACGGTGCAGGGACGTATGCCCAACAAGGCGAGTTGGTACGCAAT CGGCTGGTGCGCGTTGGACAACCTAGACGGGCTGGACATCAAGCCGCAGGGCTTCCCACGGGGCGCCTATCGGCACTGGA ACCCGGCGCCTCTAAAAACGCAGTCGCCTGTACGGAAATCGTACATAGACCCCCCTCAATAG
Upstream 100 bases:
>100_bases TTGCCGTCGATAGCGACGGCTTCTCACATGCCAACGTGGCCCGATACTGCCTCATGGATCGCGAGCCGGATCTCGTCGAC CTGATGGAGGCCGCCAGTGC
Downstream 100 bases:
>100_bases ATACGGTTTCCGTATATGGGCCACTGACCGTAGATACGGCAATCGTATCTATCCGGCCCATTTTGCCCCCAGTCCTAGAT ACGGTTTCCGTACACCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSRRATTAKAKRDGAGGAILLIPHTVIDSPAFVTLSANGVKLLIDMAAQYNTRNNGALLCSWRYMSEKRGWKSPDTLNRA RQELIDRGLIVQTVQGRMPNKASWYAIGWCALDNLDGLDIKPQGFPRGAYRHWNPAPLKTQSPVRKSYIDPPQ
Sequences:
>Translated_153_residues MSRRATTAKAKRDGAGGAILLIPHTVIDSPAFVTLSANGVKLLIDMAAQYNTRNNGALLCSWRYMSEKRGWKSPDTLNRA RQELIDRGLIVQTVQGRMPNKASWYAIGWCALDNLDGLDIKPQGFPRGAYRHWNPAPLKTQSPVRKSYIDPPQ >Mature_152_residues SRRATTAKAKRDGAGGAILLIPHTVIDSPAFVTLSANGVKLLIDMAAQYNTRNNGALLCSWRYMSEKRGWKSPDTLNRAR QELIDRGLIVQTVQGRMPNKASWYAIGWCALDNLDGLDIKPQGFPRGAYRHWNPAPLKTQSPVRKSYIDPPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17033; Mature: 16902
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRATTAKAKRDGAGGAILLIPHTVIDSPAFVTLSANGVKLLIDMAAQYNTRNNGALLC CCCCCCCCHHCCCCCCCEEEEECHHHCCCCEEEEEECCCEEEEEEEHHHCCCCCCCEEEE SWRYMSEKRGWKSPDTLNRARQELIDRGLIVQTVQGRMPNKASWYAIGWCALDNLDGLDI EEEEHHHHCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCC KPQGFPRGAYRHWNPAPLKTQSPVRKSYIDPPQ CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure SRRATTAKAKRDGAGGAILLIPHTVIDSPAFVTLSANGVKLLIDMAAQYNTRNNGALLC CCCCCCCHHCCCCCCCEEEEECHHHCCCCEEEEEECCCEEEEEEEHHHCCCCCCCEEEE SWRYMSEKRGWKSPDTLNRARQELIDRGLIVQTVQGRMPNKASWYAIGWCALDNLDGLDI EEEEHHHHCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCC KPQGFPRGAYRHWNPAPLKTQSPVRKSYIDPPQ CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA