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The map label for this gene is clpS

Identifier: 187929804

GI number: 187929804

Start: 2850700

End: 2851026

Strand: Reverse

Name: clpS

Synonym: Rpic_2734

Alternate gene names: 187929804

Gene position: 2851026-2850700 (Counterclockwise)

Preceding gene: 187929810

Following gene: 187929803

Centisome position: 72.31

GC content: 55.96

Gene sequence:

>327_bases
ATGGCAATCCGGCAAGCGACCACTCCACAACACGATGCAGGCACCGTCCTGGAGCGGAAAGAGCAAGCGCTCAAACCGCC
CGCGATGTACAAGGTGCTGCTGCTTAACGACGACTACACCCCGATGGAATTCGTCGTGATGATTCTTCAACAATACTTCA
GCAAAGACCGGGAAACAGCCACACAAATCATGCTGACGGTGCATCGGGAAGGTAAGGGCGTGTGCGGTCTCTATACCCGG
GATATCGCCGCGACGAAAGTGGAATTGGTGTCAACCCATGCACGGCAAGCGGGGCATCCGCTGCAGTGTGTGATGGAGGA
AGCATGA

Upstream 100 bases:

>100_bases
CTGACGGACGCACGCGGCACGGGCCAAACCGTTTGTAGACCTTGAAGTCGGCGTTATTTCCCCAAATTGCGAACTCGAAA
GGAGTGGTTAGAATAAGACC

Downstream 100 bases:

>100_bases
TTGCGCAAGAACTGGAAGTCAGCCTGCACATGGCGTTTGTTGAAGCCCGCCAGGCTCGCCACGAATTCATTACGGTGGAG
CATCTGCTGCTTGCGCTGCT

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MAIRQATTPQHDAGTVLERKEQALKPPAMYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQIMLTVHREGKGVCGLYTR
DIAATKVELVSTHARQAGHPLQCVMEEA

Sequences:

>Translated_108_residues
MAIRQATTPQHDAGTVLERKEQALKPPAMYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQIMLTVHREGKGVCGLYTR
DIAATKVELVSTHARQAGHPLQCVMEEA
>Mature_107_residues
AIRQATTPQHDAGTVLERKEQALKPPAMYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQIMLTVHREGKGVCGLYTRD
IAATKVELVSTHARQAGHPLQCVMEEA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family

Homologues:

Organism=Escherichia coli, GI1787108, Length=91, Percent_Identity=57.1428571428571, Blast_Score=122, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CLPS_RALPJ (B2UAR2)

Other databases:

- EMBL:   CP001068
- RefSeq:   YP_001900291.1
- ProteinModelPortal:   B2UAR2
- SMR:   B2UAR2
- GeneID:   6286253
- GenomeReviews:   CP001068_GR
- KEGG:   rpi:Rpic_2734
- HOGENOM:   HBG644923
- OMA:   VFPFGIA
- ProtClustDB:   PRK00033
- HAMAP:   MF_00302
- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719
- Gene3D:   G3DSA:3.30.1390.10

Pfam domain/function: PF02617 ClpS; SSF54736 Ribosomal_L7/12_C/ClpS-like

EC number: NA

Molecular weight: Translated: 12175; Mature: 12044

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRQATTPQHDAGTVLERKEQALKPPAMYKVLLLNDDYTPMEFVVMILQQYFSKDRETA
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHH
TQIMLTVHREGKGVCGLYTRDIAATKVELVSTHARQAGHPLQCVMEEA
HHHHHEEECCCCCEEEEHHCCHHHHHHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure 
AIRQATTPQHDAGTVLERKEQALKPPAMYKVLLLNDDYTPMEFVVMILQQYFSKDRETA
CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHH
TQIMLTVHREGKGVCGLYTRDIAATKVELVSTHARQAGHPLQCVMEEA
HHHHHEEECCCCCEEEEHHCCHHHHHHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA