| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is zupT [H]
Identifier: 187929511
GI number: 187929511
Start: 2537779
End: 2538585
Strand: Reverse
Name: zupT [H]
Synonym: Rpic_2432
Alternate gene names: 187929511
Gene position: 2538585-2537779 (Counterclockwise)
Preceding gene: 187929512
Following gene: 187929507
Centisome position: 64.39
GC content: 61.59
Gene sequence:
>807_bases ATGACCTTCGATACCACCCTGTTAGGCATTCTCCTGGCCACTGCGCTGTCTGGCATCGGCAGCATGGCGGGCGCTGCCGC GCTGTCTCTGACCGTGCTGTCGCGCATGGTCGATCGGATGGTCAGTTTCTCGGTGGGCGTGCTGCTGGCCACGTCGCTGC TGCATTCGTTGCCGGAGGCGTTCGAAGCCCATCGCGGCATCGAGCCCAATACGCATGCGTTGTTCGCCACGTTGCTCGCC GGGCTGCTGGGTTTTTTCCTGCTGGAAAAGATCTCACTGATCCGCCATTCACATCACCACGAGGGTGATGGGCACGGCCA TCACCACGGCCATGACCGGCAGGAAGCCGGGCGCAGTGGCCTGATGATCCTCGTGGGCGATGGGCTGCATAATTTTTCGG ACGGGATCGTGATTGCGGCGGCGTTCCTGGCGGACACTAAGGTCGGCATCGTCACGGCGCTGGCGATTGCTGCACACGAG ATCCCGCAAGAGATCGGCGACTTCATGGTGCTACTCAACGCCGGGTTTTCCAAGACGCGCGCCTTTGTCTACAACCTGAT CTGCAGCGTTTGCGCGCTGGTGGGCGCGGTGCTGGGTTACTACCTGCTGGACCGCCTGACGTCGTGGATTCCATACGTGC TCGTGGTGGCGTCGAGCAGCTTCATCTACATCGCCGTATGCGATCTCATGCCGCAGATGAAGCGCCGGCCGCGCTGGCAG GAATCGGCGGTGCAGGTCGCCTTGATTACGGCGGGCATCGCGATGATCTTTCTGCTGACCGAAGGTTTGCACGGTCACGC ACATTGA
Upstream 100 bases:
>100_bases TTTTCTTTTGCCTGCACTGGCAAAGGTTGGCAAAGCGGCATACAATCCGCCCTTCTTGCAACTCTGTTGCGTTTATTGGC TCCCGCTGCGTCACCTCCGC
Downstream 100 bases:
>100_bases GGCGGCGCATCGGCTTCAAGAAAAAGCCCGGTCGATATCGGGCTTTTTGCTGCGCGCCGGATTCGCAGATTACGGATTCG GCCCCGTCGCCACCGGGCGC
Product: zinc/iron permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTFDTTLLGILLATALSGIGSMAGAAALSLTVLSRMVDRMVSFSVGVLLATSLLHSLPEAFEAHRGIEPNTHALFATLLA GLLGFFLLEKISLIRHSHHHEGDGHGHHHGHDRQEAGRSGLMILVGDGLHNFSDGIVIAAAFLADTKVGIVTALAIAAHE IPQEIGDFMVLLNAGFSKTRAFVYNLICSVCALVGAVLGYYLLDRLTSWIPYVLVVASSSFIYIAVCDLMPQMKRRPRWQ ESAVQVALITAGIAMIFLLTEGLHGHAH
Sequences:
>Translated_268_residues MTFDTTLLGILLATALSGIGSMAGAAALSLTVLSRMVDRMVSFSVGVLLATSLLHSLPEAFEAHRGIEPNTHALFATLLA GLLGFFLLEKISLIRHSHHHEGDGHGHHHGHDRQEAGRSGLMILVGDGLHNFSDGIVIAAAFLADTKVGIVTALAIAAHE IPQEIGDFMVLLNAGFSKTRAFVYNLICSVCALVGAVLGYYLLDRLTSWIPYVLVVASSSFIYIAVCDLMPQMKRRPRWQ ESAVQVALITAGIAMIFLLTEGLHGHAH >Mature_267_residues TFDTTLLGILLATALSGIGSMAGAAALSLTVLSRMVDRMVSFSVGVLLATSLLHSLPEAFEAHRGIEPNTHALFATLLAG LLGFFLLEKISLIRHSHHHEGDGHGHHHGHDRQEAGRSGLMILVGDGLHNFSDGIVIAAAFLADTKVGIVTALAIAAHEI PQEIGDFMVLLNAGFSKTRAFVYNLICSVCALVGAVLGYYLLDRLTSWIPYVLVVASSSFIYIAVCDLMPQMKRRPRWQE SAVQVALITAGIAMIFLLTEGLHGHAH
Specific function: Mediates zinc uptake. May also transport other divalent cations [H]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily [H]
Homologues:
Organism=Homo sapiens, GI187936949, Length=158, Percent_Identity=36.0759493670886, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI55741750, Length=158, Percent_Identity=36.0759493670886, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI223633937, Length=258, Percent_Identity=31.3953488372093, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI223633939, Length=295, Percent_Identity=28.8135593220339, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI40255101, Length=260, Percent_Identity=28.8461538461538, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI190014617, Length=267, Percent_Identity=28.8389513108614, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI153252201, Length=131, Percent_Identity=35.8778625954198, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI190358541, Length=127, Percent_Identity=34.6456692913386, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI205830424, Length=127, Percent_Identity=34.6456692913386, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI190360568, Length=127, Percent_Identity=34.6456692913386, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI153252214, Length=128, Percent_Identity=35.15625, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI115430255, Length=121, Percent_Identity=41.3223140495868, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI115430259, Length=121, Percent_Identity=41.3223140495868, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI205830426, Length=116, Percent_Identity=36.2068965517241, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI24586665, Length=161, Percent_Identity=31.055900621118, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI205830403, Length=161, Percent_Identity=31.055900621118, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI205830407, Length=160, Percent_Identity=31.25, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI205830405, Length=129, Percent_Identity=34.1085271317829, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI206597541, Length=139, Percent_Identity=39.568345323741, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI206597539, Length=139, Percent_Identity=39.568345323741, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI117553619, Length=127, Percent_Identity=34.6456692913386, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI117553608, Length=127, Percent_Identity=34.6456692913386, Blast_Score=75, Evalue=5e-14, Organism=Escherichia coli, GI1789419, Length=259, Percent_Identity=26.6409266409266, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI193209531, Length=226, Percent_Identity=30.0884955752212, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI71992548, Length=140, Percent_Identity=33.5714285714286, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71994730, Length=277, Percent_Identity=27.0758122743682, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71998183, Length=142, Percent_Identity=36.6197183098592, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17538884, Length=110, Percent_Identity=35.4545454545455, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI32566718, Length=121, Percent_Identity=25.6198347107438, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI32566720, Length=121, Percent_Identity=25.6198347107438, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322166, Length=247, Percent_Identity=28.3400809716599, Blast_Score=85, Evalue=1e-17, Organism=Drosophila melanogaster, GI24664383, Length=117, Percent_Identity=42.7350427350427, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI161083817, Length=117, Percent_Identity=42.7350427350427, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI45549201, Length=114, Percent_Identity=42.1052631578947, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24651189, Length=281, Percent_Identity=26.6903914590747, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI24651193, Length=281, Percent_Identity=26.6903914590747, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI24651187, Length=281, Percent_Identity=26.6903914590747, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI24651191, Length=281, Percent_Identity=26.6903914590747, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI24651195, Length=281, Percent_Identity=26.6903914590747, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI24651197, Length=281, Percent_Identity=26.6903914590747, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI17864610, Length=144, Percent_Identity=32.6388888888889, Blast_Score=85, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 28724; Mature: 28593
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDTTLLGILLATALSGIGSMAGAAALSLTVLSRMVDRMVSFSVGVLLATSLLHSLPEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEAHRGIEPNTHALFATLLAGLLGFFLLEKISLIRHSHHHEGDGHGHHHGHDRQEAGRSG HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCC LMILVGDGLHNFSDGIVIAAAFLADTKVGIVTALAIAAHEIPQEIGDFMVLLNAGFSKTR EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AFVYNLICSVCALVGAVLGYYLLDRLTSWIPYVLVVASSSFIYIAVCDLMPQMKRRPRWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHH ESAVQVALITAGIAMIFLLTEGLHGHAH HHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TFDTTLLGILLATALSGIGSMAGAAALSLTVLSRMVDRMVSFSVGVLLATSLLHSLPEA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEAHRGIEPNTHALFATLLAGLLGFFLLEKISLIRHSHHHEGDGHGHHHGHDRQEAGRSG HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCC LMILVGDGLHNFSDGIVIAAAFLADTKVGIVTALAIAAHEIPQEIGDFMVLLNAGFSKTR EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AFVYNLICSVCALVGAVLGYYLLDRLTSWIPYVLVVASSSFIYIAVCDLMPQMKRRPRWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHH ESAVQVALITAGIAMIFLLTEGLHGHAH HHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA