| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is rhlE [H]
Identifier: 187929488
GI number: 187929488
Start: 2505935
End: 2507416
Strand: Reverse
Name: rhlE [H]
Synonym: Rpic_2409
Alternate gene names: 187929488
Gene position: 2507416-2505935 (Counterclockwise)
Preceding gene: 187929490
Following gene: 187929485
Centisome position: 63.6
GC content: 66.33
Gene sequence:
>1482_bases ATGTCTGAAGCGTCAGAAGCGCCGGCCAATGAATCGGTGACATTCGACAGCTTCGGCCTGCATCCGGACGTCCTCCGCGC GCTGACCGAAAGCGGTTACACCAAGCCCACGCCCATCCAGGCCGCAGCCATTCCGGTGGTGACCGCCGGCCACGACGTCA TGGGCGCCGCGCAAACCGGCACCGGCAAGACTGCCGGTTTCTCGCTGCCGATCATCCATAACCTGCTGCCCGACGCCAAC ACGAGCGCGTCGCCGGCGCGCCACCCGGTGCGGGCGCTGATCCTCACGCCCACACGCGAACTGGCCGACCAGGTGTACGA CAACGTTGCCAAGTACGCGAAGTACACGGCGTTGCGCAGCGCTGTCGTGTTCGGGGGCGTCGACATGAACCCGCAGACCG AGCAATTGCGCCGCGGCGTCGAAATCCTGGTTGCCACGCCGGGCCGCCTGCTCGACCACGTGCAGCAGCGCAGCGTGAAC CTGTCGCAGGTGCGCATGCTGGTGCTGGACGAAGCCGATCGCATGCTCGACATGGGCTTTCTGCCCGACCTGCAGCGCAT CATCAACCTGCTGCCGGCACACCGCCAGACGCTGCTGTTCTCGGCCACGTTCTCTCCCGAGATCAAGAGGCTGGCCGCGA GCTACCTGCGTCATCCGCAAACTATTGAAGTGGCACGCAGCAACGCCACGGCAGAGAACGTCCGTCAGGTCATCTACACC GTGCCGGACAACCACAAGCAGGCCGCGCTCGTGCACCTGCTGCGCCAGCGCGCGGAGCAAGGCCTGCCGCGCCAGTGCAT CGTGTTCTCCAACAGCAAGATCGGCTGCTCGCGCCTGGCGCGCGCGCTGGAGCGCGAAGGCATCAACGCCAACGCCATCC ACGGCGACAAGACGCAGACCGAGCGCATGCAAACGCTCGAGGCGTTCAAGCAGGGTACCGTTGATGTACTAGTCGCCACC GACGTTGCCGCGCGCGGTCTCGATATCTCGCAGATGCCGTGCGTGATCAACTTCGACCTGCCGTTCAACGCAGAAGACTA CGTGCACCGGATTGGCCGCACGGGCCGTGCCGGTGCTTCCGGTGATGCACTGTCGCTGTTCGCCCCGGGCGATGAACGCC TGCTGGCCGACATCGAAAAGCTGATCAAGCGCAACCTGCCGCGCGAGCAGCTGGCTGATTTCGATCCGACCGGCGAACAG GCGCGTGACCGTGAGCGCCGCGAGCGCGACGAAAAGCGTGCCCGCAGCGAAGTCCGCCGCTCCCGCGAGCGGGAAGACCG CAACGGTACCCGCGTGCTCGATCACACGATCGTGCGCCCGGCGTTCCGCCCTTCCGACGACCCGTTCTTCAATCGCCCGT ACGAATCGTCCGTGCCAGCGGAATCGGCGGAGGCTGCCAAGCCAGCGCAAGCAGCCGGTCACCCGCGCACCGCCAAGCGC CCGATCGCGGCGCTGCTCGGTGGCGTGCCGCGCAAGCGTTAA
Upstream 100 bases:
>100_bases TTTAACGCTTTGCGCGAGCCGCACGCGGGATTCTCCGCTTGGGTCTGGCGCGCCGCCATGCCAACCGGCATGCCGCATCT CCCCTATGAATACTGCAACG
Downstream 100 bases:
>100_bases GTCAGTCGACTGAAAACGGCGGCGCTCCAGCCGCCGGGGTCAATCGCACCGGGCAGGTTGTGCCAGGCGATTGGCCCATG CCGGGACGGCGTCCCGGTAG
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MSEASEAPANESVTFDSFGLHPDVLRALTESGYTKPTPIQAAAIPVVTAGHDVMGAAQTGTGKTAGFSLPIIHNLLPDAN TSASPARHPVRALILTPTRELADQVYDNVAKYAKYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQRSVN LSQVRMLVLDEADRMLDMGFLPDLQRIINLLPAHRQTLLFSATFSPEIKRLAASYLRHPQTIEVARSNATAENVRQVIYT VPDNHKQAALVHLLRQRAEQGLPRQCIVFSNSKIGCSRLARALEREGINANAIHGDKTQTERMQTLEAFKQGTVDVLVAT DVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFAPGDERLLADIEKLIKRNLPREQLADFDPTGEQ ARDRERRERDEKRARSEVRRSREREDRNGTRVLDHTIVRPAFRPSDDPFFNRPYESSVPAESAEAAKPAQAAGHPRTAKR PIAALLGGVPRKR
Sequences:
>Translated_493_residues MSEASEAPANESVTFDSFGLHPDVLRALTESGYTKPTPIQAAAIPVVTAGHDVMGAAQTGTGKTAGFSLPIIHNLLPDAN TSASPARHPVRALILTPTRELADQVYDNVAKYAKYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQRSVN LSQVRMLVLDEADRMLDMGFLPDLQRIINLLPAHRQTLLFSATFSPEIKRLAASYLRHPQTIEVARSNATAENVRQVIYT VPDNHKQAALVHLLRQRAEQGLPRQCIVFSNSKIGCSRLARALEREGINANAIHGDKTQTERMQTLEAFKQGTVDVLVAT DVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFAPGDERLLADIEKLIKRNLPREQLADFDPTGEQ ARDRERRERDEKRARSEVRRSREREDRNGTRVLDHTIVRPAFRPSDDPFFNRPYESSVPAESAEAAKPAQAAGHPRTAKR PIAALLGGVPRKR >Mature_492_residues SEASEAPANESVTFDSFGLHPDVLRALTESGYTKPTPIQAAAIPVVTAGHDVMGAAQTGTGKTAGFSLPIIHNLLPDANT SASPARHPVRALILTPTRELADQVYDNVAKYAKYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQRSVNL SQVRMLVLDEADRMLDMGFLPDLQRIINLLPAHRQTLLFSATFSPEIKRLAASYLRHPQTIEVARSNATAENVRQVIYTV PDNHKQAALVHLLRQRAEQGLPRQCIVFSNSKIGCSRLARALEREGINANAIHGDKTQTERMQTLEAFKQGTVDVLVATD VAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFAPGDERLLADIEKLIKRNLPREQLADFDPTGEQA RDRERRERDEKRARSEVRRSREREDRNGTRVLDHTIVRPAFRPSDDPFFNRPYESSVPAESAEAAKPAQAAGHPRTAKRP IAALLGGVPRKR
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI41327771, Length=397, Percent_Identity=39.0428211586902, Blast_Score=299, Evalue=4e-81, Organism=Homo sapiens, GI262118318, Length=362, Percent_Identity=42.2651933701657, Blast_Score=286, Evalue=4e-77, Organism=Homo sapiens, GI262231852, Length=362, Percent_Identity=42.2651933701657, Blast_Score=286, Evalue=4e-77, Organism=Homo sapiens, GI216548263, Length=362, Percent_Identity=42.2651933701657, Blast_Score=286, Evalue=4e-77, Organism=Homo sapiens, GI13518015, Length=362, Percent_Identity=42.2651933701657, Blast_Score=285, Evalue=6e-77, Organism=Homo sapiens, GI222352149, Length=415, Percent_Identity=39.7590361445783, Blast_Score=284, Evalue=1e-76, Organism=Homo sapiens, GI301171467, Length=365, Percent_Identity=42.4657534246575, Blast_Score=282, Evalue=6e-76, Organism=Homo sapiens, GI87196351, Length=365, Percent_Identity=42.4657534246575, Blast_Score=281, Evalue=7e-76, Organism=Homo sapiens, GI301171475, Length=365, Percent_Identity=42.4657534246575, Blast_Score=281, Evalue=8e-76, Organism=Homo sapiens, GI169881239, Length=365, Percent_Identity=42.4657534246575, Blast_Score=281, Evalue=1e-75, Organism=Homo sapiens, GI13514809, Length=365, Percent_Identity=42.4657534246575, Blast_Score=281, Evalue=1e-75, Organism=Homo sapiens, GI148613856, Length=364, Percent_Identity=40.9340659340659, Blast_Score=278, Evalue=7e-75, Organism=Homo sapiens, GI38201710, Length=364, Percent_Identity=40.9340659340659, Blast_Score=278, Evalue=7e-75, Organism=Homo sapiens, GI20149629, Length=430, Percent_Identity=36.9767441860465, Blast_Score=277, Evalue=2e-74, Organism=Homo sapiens, GI4758138, Length=364, Percent_Identity=40.1098901098901, Blast_Score=277, Evalue=2e-74, Organism=Homo sapiens, GI21071032, Length=384, Percent_Identity=40.1041666666667, Blast_Score=272, Evalue=5e-73, Organism=Homo sapiens, GI45446747, Length=375, Percent_Identity=38.6666666666667, Blast_Score=271, Evalue=7e-73, Organism=Homo sapiens, GI45446743, Length=375, Percent_Identity=38.6666666666667, Blast_Score=271, Evalue=7e-73, Organism=Homo sapiens, GI224593278, Length=411, Percent_Identity=38.6861313868613, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI55749865, Length=409, Percent_Identity=36.1858190709046, Blast_Score=261, Evalue=7e-70, Organism=Homo sapiens, GI41327773, Length=373, Percent_Identity=38.3378016085791, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI188035877, Length=374, Percent_Identity=38.5026737967914, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI31542656, Length=376, Percent_Identity=37.2340425531915, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI7661920, Length=368, Percent_Identity=35.8695652173913, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI164419743, Length=387, Percent_Identity=36.9509043927649, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI51094101, Length=387, Percent_Identity=36.9509043927649, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI41327776, Length=430, Percent_Identity=33.953488372093, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI13514831, Length=433, Percent_Identity=34.8729792147806, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI164664518, Length=380, Percent_Identity=32.8947368421053, Blast_Score=213, Evalue=5e-55, Organism=Homo sapiens, GI50659095, Length=381, Percent_Identity=34.6456692913386, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI13129006, Length=376, Percent_Identity=34.8404255319149, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI4758112, Length=418, Percent_Identity=31.8181818181818, Blast_Score=208, Evalue=8e-54, Organism=Homo sapiens, GI18375623, Length=418, Percent_Identity=31.8181818181818, Blast_Score=208, Evalue=8e-54, Organism=Homo sapiens, GI21040371, Length=399, Percent_Identity=32.3308270676692, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI38569505, Length=378, Percent_Identity=32.010582010582, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI38569503, Length=378, Percent_Identity=32.010582010582, Blast_Score=206, Evalue=6e-53, Organism=Homo sapiens, GI41327779, Length=370, Percent_Identity=36.7567567567568, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI4503529, Length=379, Percent_Identity=34.5646437994723, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI17505907, Length=413, Percent_Identity=31.9612590799031, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI38327634, Length=402, Percent_Identity=33.0845771144279, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI83700235, Length=378, Percent_Identity=33.5978835978836, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI9506931, Length=403, Percent_Identity=31.0173697270471, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI256223453, Length=370, Percent_Identity=31.8918918918919, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI9966805, Length=340, Percent_Identity=34.4117647058824, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI6005743, Length=406, Percent_Identity=30.2955665024631, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI8922886, Length=406, Percent_Identity=30.5418719211823, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI4826686, Length=343, Percent_Identity=33.2361516034985, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI256773275, Length=409, Percent_Identity=32.7628361858191, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI62241022, Length=381, Percent_Identity=30.9711286089239, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI164419732, Length=358, Percent_Identity=31.2849162011173, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI154759257, Length=470, Percent_Identity=28.7234042553192, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI62241024, Length=360, Percent_Identity=30.8333333333333, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI20336298, Length=362, Percent_Identity=30.1104972375691, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI148612816, Length=337, Percent_Identity=26.4094955489614, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI51242947, Length=337, Percent_Identity=26.4094955489614, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI51242943, Length=337, Percent_Identity=26.4094955489614, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI284005309, Length=414, Percent_Identity=23.4299516908213, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1787016, Length=384, Percent_Identity=53.90625, Blast_Score=409, Evalue=1e-115, Organism=Escherichia coli, GI87082221, Length=393, Percent_Identity=41.7302798982188, Blast_Score=303, Evalue=2e-83, Organism=Escherichia coli, GI1790214, Length=375, Percent_Identity=40.5333333333333, Blast_Score=278, Evalue=7e-76, Organism=Escherichia coli, GI1787605, Length=351, Percent_Identity=43.3048433048433, Blast_Score=254, Evalue=6e-69, Organism=Escherichia coli, GI1788930, Length=359, Percent_Identity=42.3398328690808, Blast_Score=239, Evalue=4e-64, Organism=Escherichia coli, GI48994977, Length=373, Percent_Identity=25.7372654155496, Blast_Score=76, Evalue=4e-15, Organism=Caenorhabditis elegans, GI32565321, Length=396, Percent_Identity=38.8888888888889, Blast_Score=299, Evalue=2e-81, Organism=Caenorhabditis elegans, GI17510307, Length=381, Percent_Identity=42.257217847769, Blast_Score=284, Evalue=7e-77, Organism=Caenorhabditis elegans, GI17510309, Length=381, Percent_Identity=42.257217847769, Blast_Score=284, Evalue=8e-77, Organism=Caenorhabditis elegans, GI71995514, Length=381, Percent_Identity=42.257217847769, Blast_Score=283, Evalue=1e-76, Organism=Caenorhabditis elegans, GI71995718, Length=382, Percent_Identity=41.3612565445026, Blast_Score=277, Evalue=1e-74, Organism=Caenorhabditis elegans, GI115533224, Length=393, Percent_Identity=38.9312977099237, Blast_Score=269, Evalue=3e-72, Organism=Caenorhabditis elegans, GI17555296, Length=421, Percent_Identity=36.5795724465558, Blast_Score=264, Evalue=7e-71, Organism=Caenorhabditis elegans, GI86570094, Length=369, Percent_Identity=39.8373983739837, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI17510559, Length=394, Percent_Identity=37.3096446700508, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17507877, Length=381, Percent_Identity=38.8451443569554, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17507945, Length=360, Percent_Identity=38.6111111111111, Blast_Score=248, Evalue=6e-66, Organism=Caenorhabditis elegans, GI17507879, Length=385, Percent_Identity=37.1428571428571, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17507881, Length=381, Percent_Identity=38.0577427821522, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI71995724, Length=368, Percent_Identity=36.4130434782609, Blast_Score=241, Evalue=5e-64, Organism=Caenorhabditis elegans, GI17507121, Length=379, Percent_Identity=36.1477572559367, Blast_Score=241, Evalue=7e-64, Organism=Caenorhabditis elegans, GI17552642, Length=374, Percent_Identity=37.1657754010695, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17537549, Length=375, Percent_Identity=35.2, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17509811, Length=382, Percent_Identity=37.434554973822, Blast_Score=234, Evalue=9e-62, Organism=Caenorhabditis elegans, GI17552114, Length=378, Percent_Identity=34.3915343915344, Blast_Score=231, Evalue=5e-61, Organism=Caenorhabditis elegans, GI71999646, Length=364, Percent_Identity=34.8901098901099, Blast_Score=228, Evalue=8e-60, Organism=Caenorhabditis elegans, GI71999644, Length=364, Percent_Identity=34.8901098901099, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI71987143, Length=384, Percent_Identity=33.59375, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=34.3915343915344, Blast_Score=218, Evalue=5e-57, Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=34.3915343915344, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI193208216, Length=410, Percent_Identity=34.6341463414634, Blast_Score=204, Evalue=7e-53, Organism=Caenorhabditis elegans, GI17508543, Length=384, Percent_Identity=33.3333333333333, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17505370, Length=378, Percent_Identity=34.1269841269841, Blast_Score=197, Evalue=9e-51, Organism=Caenorhabditis elegans, GI71990816, Length=374, Percent_Identity=33.9572192513369, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI71982858, Length=361, Percent_Identity=30.7479224376731, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI193206561, Length=374, Percent_Identity=31.8181818181818, Blast_Score=184, Evalue=8e-47, Organism=Caenorhabditis elegans, GI17507641, Length=397, Percent_Identity=32.7455919395466, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI17556951, Length=359, Percent_Identity=31.7548746518106, Blast_Score=167, Evalue=2e-41, Organism=Caenorhabditis elegans, GI32564046, Length=416, Percent_Identity=31.4903846153846, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17536099, Length=423, Percent_Identity=29.7872340425532, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17536101, Length=423, Percent_Identity=29.7872340425532, Blast_Score=165, Evalue=7e-41, Organism=Caenorhabditis elegans, GI25148203, Length=429, Percent_Identity=25.6410256410256, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17536103, Length=423, Percent_Identity=29.7872340425532, Blast_Score=161, Evalue=6e-40, Organism=Caenorhabditis elegans, GI17553716, Length=364, Percent_Identity=28.021978021978, Blast_Score=151, Evalue=7e-37, Organism=Caenorhabditis elegans, GI25148291, Length=332, Percent_Identity=29.2168674698795, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71997889, Length=407, Percent_Identity=27.2727272727273, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI71982862, Length=209, Percent_Identity=32.0574162679426, Blast_Score=121, Evalue=7e-28, Organism=Caenorhabditis elegans, GI25148205, Length=345, Percent_Identity=24.3478260869565, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71987152, Length=107, Percent_Identity=41.1214953271028, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI25145561, Length=348, Percent_Identity=22.7011494252874, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6321856, Length=428, Percent_Identity=38.5514018691589, Blast_Score=298, Evalue=1e-81, Organism=Saccharomyces cerevisiae, GI6324217, Length=383, Percent_Identity=41.77545691906, Blast_Score=294, Evalue=2e-80, Organism=Saccharomyces cerevisiae, GI6325138, Length=371, Percent_Identity=42.0485175202156, Blast_Score=286, Evalue=5e-78, Organism=Saccharomyces cerevisiae, GI6321360, Length=367, Percent_Identity=41.41689373297, Blast_Score=280, Evalue=3e-76, Organism=Saccharomyces cerevisiae, GI6324778, Length=361, Percent_Identity=40.9972299168975, Blast_Score=279, Evalue=8e-76, Organism=Saccharomyces cerevisiae, GI6323021, Length=370, Percent_Identity=38.6486486486486, Blast_Score=249, Evalue=5e-67, Organism=Saccharomyces cerevisiae, GI6320041, Length=367, Percent_Identity=35.9673024523161, Blast_Score=230, Evalue=5e-61, Organism=Saccharomyces cerevisiae, GI6320224, Length=373, Percent_Identity=33.5120643431635, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6322427, Length=359, Percent_Identity=37.0473537604457, Blast_Score=220, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6320449, Length=400, Percent_Identity=34.75, Blast_Score=216, Evalue=6e-57, Organism=Saccharomyces cerevisiae, GI6323947, Length=375, Percent_Identity=35.4666666666667, Blast_Score=214, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6319714, Length=375, Percent_Identity=32.8, Blast_Score=209, Evalue=8e-55, Organism=Saccharomyces cerevisiae, GI6320173, Length=432, Percent_Identity=30.0925925925926, Blast_Score=209, Evalue=8e-55, Organism=Saccharomyces cerevisiae, GI6322912, Length=336, Percent_Identity=33.6309523809524, Blast_Score=199, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6322323, Length=336, Percent_Identity=33.6309523809524, Blast_Score=199, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=438, Percent_Identity=31.5068493150685, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6320119, Length=376, Percent_Identity=32.4468085106383, Blast_Score=192, Evalue=8e-50, Organism=Saccharomyces cerevisiae, GI6321111, Length=383, Percent_Identity=32.6370757180157, Blast_Score=190, Evalue=5e-49, Organism=Saccharomyces cerevisiae, GI6324620, Length=370, Percent_Identity=31.8918918918919, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6319618, Length=413, Percent_Identity=30.2663438256659, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6323306, Length=425, Percent_Identity=28, Blast_Score=176, Evalue=7e-45, Organism=Saccharomyces cerevisiae, GI6321267, Length=377, Percent_Identity=30.7692307692308, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6320400, Length=390, Percent_Identity=32.3076923076923, Blast_Score=163, Evalue=7e-41, Organism=Saccharomyces cerevisiae, GI6324366, Length=368, Percent_Identity=26.3586956521739, Blast_Score=135, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6321374, Length=435, Percent_Identity=25.5172413793103, Blast_Score=117, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6322876, Length=231, Percent_Identity=32.4675324675325, Blast_Score=102, Evalue=1e-22, Organism=Drosophila melanogaster, GI24584399, Length=373, Percent_Identity=42.3592493297587, Blast_Score=295, Evalue=6e-80, Organism=Drosophila melanogaster, GI24584994, Length=396, Percent_Identity=37.6262626262626, Blast_Score=292, Evalue=4e-79, Organism=Drosophila melanogaster, GI17985987, Length=392, Percent_Identity=40.8163265306122, Blast_Score=283, Evalue=2e-76, Organism=Drosophila melanogaster, GI24585582, Length=382, Percent_Identity=39.0052356020942, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI21355075, Length=385, Percent_Identity=38.7012987012987, Blast_Score=277, Evalue=1e-74, Organism=Drosophila melanogaster, GI21356161, Length=425, Percent_Identity=39.0588235294118, Blast_Score=275, Evalue=4e-74, Organism=Drosophila melanogaster, GI28574962, Length=375, Percent_Identity=38.9333333333333, Blast_Score=272, Evalue=4e-73, Organism=Drosophila melanogaster, GI18857967, Length=371, Percent_Identity=40.4312668463612, Blast_Score=271, Evalue=9e-73, Organism=Drosophila melanogaster, GI24644479, Length=355, Percent_Identity=40.5633802816901, Blast_Score=268, Evalue=8e-72, Organism=Drosophila melanogaster, GI24644483, Length=355, Percent_Identity=40.5633802816901, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI281361218, Length=355, Percent_Identity=40.5633802816901, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24644481, Length=355, Percent_Identity=40.5633802816901, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24644487, Length=355, Percent_Identity=40.5633802816901, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI45551833, Length=355, Percent_Identity=40.5633802816901, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24644485, Length=355, Percent_Identity=40.5633802816901, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24662330, Length=370, Percent_Identity=38.1081081081081, Blast_Score=266, Evalue=3e-71, Organism=Drosophila melanogaster, GI24642151, Length=368, Percent_Identity=38.8586956521739, Blast_Score=261, Evalue=8e-70, Organism=Drosophila melanogaster, GI17977678, Length=396, Percent_Identity=37.6262626262626, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI17136814, Length=384, Percent_Identity=38.0208333333333, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24583281, Length=379, Percent_Identity=34.8284960422164, Blast_Score=228, Evalue=6e-60, Organism=Drosophila melanogaster, GI24583279, Length=379, Percent_Identity=34.8284960422164, Blast_Score=228, Evalue=7e-60, Organism=Drosophila melanogaster, GI24645031, Length=368, Percent_Identity=34.5108695652174, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI281365720, Length=319, Percent_Identity=38.2445141065831, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI24582080, Length=368, Percent_Identity=35.054347826087, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI24582078, Length=368, Percent_Identity=35.054347826087, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI17136248, Length=368, Percent_Identity=35.054347826087, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI24582075, Length=368, Percent_Identity=35.054347826087, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI28575014, Length=371, Percent_Identity=33.9622641509434, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI28571808, Length=350, Percent_Identity=35.4285714285714, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI28571809, Length=350, Percent_Identity=35.4285714285714, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI20130173, Length=509, Percent_Identity=29.8624754420432, Blast_Score=206, Evalue=4e-53, Organism=Drosophila melanogaster, GI24666101, Length=384, Percent_Identity=34.1145833333333, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI24581954, Length=404, Percent_Identity=30.9405940594059, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24581952, Length=404, Percent_Identity=30.9405940594059, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24581956, Length=404, Percent_Identity=30.9405940594059, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24642822, Length=394, Percent_Identity=32.2335025380711, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI17647335, Length=365, Percent_Identity=31.7808219178082, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24643725, Length=451, Percent_Identity=28.8248337028825, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI18859659, Length=457, Percent_Identity=28.2275711159737, Blast_Score=178, Evalue=6e-45, Organism=Drosophila melanogaster, GI28571338, Length=457, Percent_Identity=28.2275711159737, Blast_Score=178, Evalue=6e-45, Organism=Drosophila melanogaster, GI21355559, Length=366, Percent_Identity=34.4262295081967, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI24668515, Length=351, Percent_Identity=32.7635327635328, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI19920478, Length=360, Percent_Identity=34.4444444444444, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI24640164, Length=379, Percent_Identity=27.9683377308707, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI17136666, Length=445, Percent_Identity=26.2921348314607, Blast_Score=133, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 54354; Mature: 54223
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEASEAPANESVTFDSFGLHPDVLRALTESGYTKPTPIQAAAIPVVTAGHDVMGAAQTG CCCCCCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHCEEEECCCCCCCCCCCC TGKTAGFSLPIIHNLLPDANTSASPARHPVRALILTPTRELADQVYDNVAKYAKYTALRS CCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH AVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQRSVNLSQVRMLVLDEADRMLDMGF HHHCCCCCCCCCHHHHHCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC LPDLQRIINLLPAHRQTLLFSATFSPEIKRLAASYLRHPQTIEVARSNATAENVRQVIYT CHHHHHHHHHCCCCHHEEEEEECCCHHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHC VPDNHKQAALVHLLRQRAEQGLPRQCIVFSNSKIGCSRLARALEREGINANAIHGDKTQT CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHH ERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGAS HHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCC GDALSLFAPGDERLLADIEKLIKRNLPREQLADFDPTGEQARDRERRERDEKRARSEVRR CCEEEEECCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SREREDRNGTRVLDHTIVRPAFRPSDDPFFNRPYESSVPAESAEAAKPAQAAGHPRTAKR HHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCHHH PIAALLGGVPRKR HHHHHHCCCCCCC >Mature Secondary Structure SEASEAPANESVTFDSFGLHPDVLRALTESGYTKPTPIQAAAIPVVTAGHDVMGAAQTG CCCCCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHCEEEECCCCCCCCCCCC TGKTAGFSLPIIHNLLPDANTSASPARHPVRALILTPTRELADQVYDNVAKYAKYTALRS CCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH AVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQRSVNLSQVRMLVLDEADRMLDMGF HHHCCCCCCCCCHHHHHCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC LPDLQRIINLLPAHRQTLLFSATFSPEIKRLAASYLRHPQTIEVARSNATAENVRQVIYT CHHHHHHHHHCCCCHHEEEEEECCCHHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHC VPDNHKQAALVHLLRQRAEQGLPRQCIVFSNSKIGCSRLARALEREGINANAIHGDKTQT CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHH ERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGAS HHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCC GDALSLFAPGDERLLADIEKLIKRNLPREQLADFDPTGEQARDRERRERDEKRARSEVRR CCEEEEECCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SREREDRNGTRVLDHTIVRPAFRPSDDPFFNRPYESSVPAESAEAAKPAQAAGHPRTAKR HHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCHHH PIAALLGGVPRKR HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]