| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929481
Identifier: 187929481
GI number: 187929481
Start: 2496675
End: 2497742
Strand: Reverse
Name: 187929481
Synonym: Rpic_2402
Alternate gene names: NA
Gene position: 2497742-2496675 (Counterclockwise)
Preceding gene: 187929482
Following gene: 187929480
Centisome position: 63.35
GC content: 62.92
Gene sequence:
>1068_bases ATGAACGTCGGAATCTCGTGCAACGCGCTGGGCTACAGCGGTGGCAGCGAGCGCTACGCGATGGACCTGGTGCGCGGCCT GCATGAGCGCGCCATCCGTCCCGTGTTCTTCGCCAAGATGGTGGACAAGGCGCTTCCTGAATATCGCCAGGTCAAGGCTG TTGCATTGCCAACGCGCAAGCTGCCCGGCAAATTGAATGACCACGCGTTCGGCTGGCTCGTGCGCCATCTGACCAAGCGC GAGCACATCGATCTGATGATCGGCTGCAATCGCACGGGCGCTTCGGATATCGCTATTTGTGGCGGCACGCACGTCGGCTA TCTCAAGAGCTTTTCAAAAAAGGCGGCCTTCTGGGATCGCCAGCAGATCGCGCTGGAGCGCCGAGACTATGTGCGCTCGC ACGTCGTCGTTGCGCACTCGCGACTGATGGCGCAGGAAGTGCTCGACTACTACGACATTCCCGCTGCCAAGGTAAAGACG GTGTACCCCCCGGTGAGTGAGACGAAGTTCTCGCCGGTGGATGACGCAGAGCGCCAGCGCCTGCGCGATGAGCTTGGCTT CGCGAAGGATCGGGTCACGTTTGTGTTCCCGTCGTCGAGCCACAAGCGCAAGGGCTATCCGCTGCTGGAGGCGTTCTTCT CCAAGACGGATCTGCCGGTGCAACTGGTGGTCATCGGGCGCCCGGTGTCCTCGTCCTCGCCCAACATCCGCTACCTGGGA TACCGCAAGGACATCGAGAACGTCTACCGCGCAGCGGACTACACGATCCTCGCTTCGCACTACGAGCCGTTCGGGCTGAT TGGGGTGGAGTCCGTGCTGTGCGGCACGCCTGCCGTACTGGCAGCCAATATCGCTTGCACCGAGGTGATCTCGGTCGAAG GAGCACCCACCTTCGACCTGGATGATCCAGCCACGCTGGCGCGCACGATTGAGGCAGCTGTTGCCCGTGCGCAGGCTGGG CAGGCGCGCTTGGCGAATCCGCGTGAGCACCTGCGCTATGACCCGAGCATCGCTGCGCACATCGACGCGCTCCTGGCGCT TGCACCTGGCGCGGGGACGTTGCGATGA
Upstream 100 bases:
>100_bases CAACGGTGTACGAGTAGTTCGAAGATGGCGCGGGGGGCGCCATCGCCGGGCGTAGGCTCGGCACGACTGCGGTCTCAATA CGATTATTACTAAAGCATCC
Downstream 100 bases:
>100_bases GCAGCTTGATGCAACGAGGCCGGACGCTGATAGCAAGCGCACCGGCGGCGCTGACCGTGTTTGGAATCGCCATCCTCCCG GCTTTCATGCTGTCTGTGCG
Product: group1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Lipopolysaccharide Core Biosynthesis Protein RfaG; Glycosyl Transferase Group 1 Family Protein; Lipopolysaccharide Core Biosynthesis Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Group 1 Glycosyl Transferase; Glycosyltransferase Family 1 Protein; LPS Biosynthesis-Related Protein; Lipopolysaccharide Glycosyltransferase; Glycosyl Transferase G; Glucosyl Transferase; LOW QUALITY PROTEIN Protein; Glycosyl Transferase
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MNVGISCNALGYSGGSERYAMDLVRGLHERAIRPVFFAKMVDKALPEYRQVKAVALPTRKLPGKLNDHAFGWLVRHLTKR EHIDLMIGCNRTGASDIAICGGTHVGYLKSFSKKAAFWDRQQIALERRDYVRSHVVVAHSRLMAQEVLDYYDIPAAKVKT VYPPVSETKFSPVDDAERQRLRDELGFAKDRVTFVFPSSSHKRKGYPLLEAFFSKTDLPVQLVVIGRPVSSSSPNIRYLG YRKDIENVYRAADYTILASHYEPFGLIGVESVLCGTPAVLAANIACTEVISVEGAPTFDLDDPATLARTIEAAVARAQAG QARLANPREHLRYDPSIAAHIDALLALAPGAGTLR
Sequences:
>Translated_355_residues MNVGISCNALGYSGGSERYAMDLVRGLHERAIRPVFFAKMVDKALPEYRQVKAVALPTRKLPGKLNDHAFGWLVRHLTKR EHIDLMIGCNRTGASDIAICGGTHVGYLKSFSKKAAFWDRQQIALERRDYVRSHVVVAHSRLMAQEVLDYYDIPAAKVKT VYPPVSETKFSPVDDAERQRLRDELGFAKDRVTFVFPSSSHKRKGYPLLEAFFSKTDLPVQLVVIGRPVSSSSPNIRYLG YRKDIENVYRAADYTILASHYEPFGLIGVESVLCGTPAVLAANIACTEVISVEGAPTFDLDDPATLARTIEAAVARAQAG QARLANPREHLRYDPSIAAHIDALLALAPGAGTLR >Mature_355_residues MNVGISCNALGYSGGSERYAMDLVRGLHERAIRPVFFAKMVDKALPEYRQVKAVALPTRKLPGKLNDHAFGWLVRHLTKR EHIDLMIGCNRTGASDIAICGGTHVGYLKSFSKKAAFWDRQQIALERRDYVRSHVVVAHSRLMAQEVLDYYDIPAAKVKT VYPPVSETKFSPVDDAERQRLRDELGFAKDRVTFVFPSSSHKRKGYPLLEAFFSKTDLPVQLVVIGRPVSSSSPNIRYLG YRKDIENVYRAADYTILASHYEPFGLIGVESVLCGTPAVLAANIACTEVISVEGAPTFDLDDPATLARTIEAAVARAQAG QARLANPREHLRYDPSIAAHIDALLALAPGAGTLR
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39178; Mature: 39178
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVGISCNALGYSGGSERYAMDLVRGLHERAIRPVFFAKMVDKALPEYRQVKAVALPTRK CCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCHH LPGKLNDHAFGWLVRHLTKREHIDLMIGCNRTGASDIAICGGTHVGYLKSFSKKAAFWDR CCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH QQIALERRDYVRSHVVVAHSRLMAQEVLDYYDIPAAKVKTVYPPVSETKFSPVDDAERQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCHHHHHH LRDELGFAKDRVTFVFPSSSHKRKGYPLLEAFFSKTDLPVQLVVIGRPVSSSSPNIRYLG HHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEE YRKDIENVYRAADYTILASHYEPFGLIGVESVLCGTPAVLAANIACTEVISVEGAPTFDL EHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHEEEECCCCCCCC DDPATLARTIEAAVARAQAGQARLANPREHLRYDPSIAAHIDALLALAPGAGTLR CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNVGISCNALGYSGGSERYAMDLVRGLHERAIRPVFFAKMVDKALPEYRQVKAVALPTRK CCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCHH LPGKLNDHAFGWLVRHLTKREHIDLMIGCNRTGASDIAICGGTHVGYLKSFSKKAAFWDR CCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH QQIALERRDYVRSHVVVAHSRLMAQEVLDYYDIPAAKVKTVYPPVSETKFSPVDDAERQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCHHHHHH LRDELGFAKDRVTFVFPSSSHKRKGYPLLEAFFSKTDLPVQLVVIGRPVSSSSPNIRYLG HHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEE YRKDIENVYRAADYTILASHYEPFGLIGVESVLCGTPAVLAANIACTEVISVEGAPTFDL EHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHEEEECCCCCCCC DDPATLARTIEAAVARAQAGQARLANPREHLRYDPSIAAHIDALLALAPGAGTLR CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA