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The map label for this gene is 187929418

Identifier: 187929418

GI number: 187929418

Start: 2442562

End: 2443047

Strand: Direct

Name: 187929418

Synonym: Rpic_2339

Alternate gene names: NA

Gene position: 2442562-2443047 (Clockwise)

Preceding gene: 187929417

Following gene: 187929419

Centisome position: 61.95

GC content: 58.02

Gene sequence:

>486_bases
ATGGTTGTCGCATCTGACGTTAAGCACGTAGCCGCCAAGTTCCGTGCATTCCTCACTGAACGTGGTGCGGAGGTCCTGAA
GCCGACAAGCGAGTGGGAACTTATTCGCTTCAACTGTGCGGCCGGTGTCGCCATTGTCTACACCGATGCTCGTGGGCGTA
CCACCTTTACTGGTGAGTCGCTAGCTGCATGGAACGCATTCTGCAGCAGCGGCGCATGGAAAGCAGGCGTTGCCAAAACG
CGTAAGAAGCGCAGCCCAGTTGTGCAGACGCTTCTCGATCGCGACGGCGATTGCTGTTTCTACTGCTGGAAGGTCATGGA
ACCCACCGATCAAAGCGTCGAGCACTTGGTGCCGGTTGTTCATGGTGGCCCCAACCACATTAGCAATCTCGCGCTCGCTC
ACCGCCATTGCAACGCGGCCGCAAGACATCTTAGCGCGATGGAAAAGATTCGGCGCCGTGAGCGCGCAAAGCCGGTAGGA
GCCTGA

Upstream 100 bases:

>100_bases
CTACGCGCCGCCTTCACCCTGAAGGTCGCATCTATCAACGAGAAGATCAGCAAGCTGCAAGCGCTTCCATTCAACTCCGC
AGAAGTCGTGGAGGCCTGAC

Downstream 100 bases:

>100_bases
TCATGAAGAAGATCTCCCTGATTTTGATCGCTGCAGCTGCCCTTTCTGCATGCAGTCGCGATGCAGATGTGGCATCTCAA
AACCTGTCGGTTGCGGCTGA

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Nuclease

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MVVASDVKHVAAKFRAFLTERGAEVLKPTSEWELIRFNCAAGVAIVYTDARGRTTFTGESLAAWNAFCSSGAWKAGVAKT
RKKRSPVVQTLLDRDGDCCFYCWKVMEPTDQSVEHLVPVVHGGPNHISNLALAHRHCNAAARHLSAMEKIRRRERAKPVG
A

Sequences:

>Translated_161_residues
MVVASDVKHVAAKFRAFLTERGAEVLKPTSEWELIRFNCAAGVAIVYTDARGRTTFTGESLAAWNAFCSSGAWKAGVAKT
RKKRSPVVQTLLDRDGDCCFYCWKVMEPTDQSVEHLVPVVHGGPNHISNLALAHRHCNAAARHLSAMEKIRRRERAKPVG
A
>Mature_161_residues
MVVASDVKHVAAKFRAFLTERGAEVLKPTSEWELIRFNCAAGVAIVYTDARGRTTFTGESLAAWNAFCSSGAWKAGVAKT
RKKRSPVVQTLLDRDGDCCFYCWKVMEPTDQSVEHLVPVVHGGPNHISNLALAHRHCNAAARHLSAMEKIRRRERAKPVG
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17745; Mature: 17745

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00028 ZINC_FINGER_C2H2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVASDVKHVAAKFRAFLTERGAEVLKPTSEWELIRFNCAAGVAIVYTDARGRTTFTGES
CCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCCEEEEEECCCCCEEECCCH
LAAWNAFCSSGAWKAGVAKTRKKRSPVVQTLLDRDGDCCFYCWKVMEPTDQSVEHLVPVV
HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHH
HGGPNHISNLALAHRHCNAAARHLSAMEKIRRRERAKPVGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVVASDVKHVAAKFRAFLTERGAEVLKPTSEWELIRFNCAAGVAIVYTDARGRTTFTGES
CCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCCEEEEEECCCCCEEECCCH
LAAWNAFCSSGAWKAGVAKTRKKRSPVVQTLLDRDGDCCFYCWKVMEPTDQSVEHLVPVV
HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHH
HGGPNHISNLALAHRHCNAAARHLSAMEKIRRRERAKPVGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA