| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929379
Identifier: 187929379
GI number: 187929379
Start: 2418896
End: 2420161
Strand: Reverse
Name: 187929379
Synonym: Rpic_2300
Alternate gene names: NA
Gene position: 2420161-2418896 (Counterclockwise)
Preceding gene: 187929380
Following gene: 187929378
Centisome position: 61.39
GC content: 62.24
Gene sequence:
>1266_bases GTGGCAAATACGATCCTCACGATCGACATGATCACGCGCGAAGCACTGCGCCTGTTCAAGAACTCGAATGCGTTCCTCAA GTCGATCGACCGTCAATACGACGAAGACTTCGCCAAGTCCGGCGCAAAGATCGGTTCCGCACTGCGCGTGCGCCTGCCGA ACGACTTCACGGTTCGCCGTGGCGCTGCGGCATCGGTGCAAGGCACGAACGAACAGAAGACCTCGCTGGTGATGGCCAAC CAGATCGGCGTGGATATTCAGTTCAGCTCGGCCGAGCGCGCCCTGTCGTTGGACGACTACAGCGAACGCATTCTCAAGCC CGCAATCAACGACATCGCAGGTCAGATCGCCGCGGACATCATGGGTGGCATGGACGGCCTGGTGCCGGCCGGTACGCTGT ACCCGGACACGCAGCTGCCAGCTTCGAACCTCGTCGGCAAGTTTGACGGTTCGAACAACCTGCTGAACGCGGATCTGAAC ACCTTCCTGTCGGCCAATGCCCGCCTGAACAAGCTGTCGGCACCTGGCAATCGCAAGATCGTGCTCGACCCGATCACGGA AGCGCGCATGGTCGGCTCGCTGGCTGGCCTGCTGAACCCGTCCAATGAGATCAGCGAGCAGTTCCTGACTGGCCAGATGA AGCGAGGCCTGGGCTTCACGTGGATGATGGACCAGACGGTACTGGCCCACACCACGGGTGCCTACGGCACGCCTCCGACC GTCAGTGGCGCGAACCAGTCGGGCAGCGGCCTGGGTACGATGACGCTCAACGTCTCGGCGCTTAACGGTCCGGTGAACGC GGGCGATGTCTTCACGATTGCCGGCGTGTTCGCGGTGAACCGCGTGACCAAGCAAGCCTACCCGGAACTGCAACAGTTCA CGGTGGTGCAAGCTGCGGCTGCCGGCGCAACCTCGCTGTCGATCTACCCGTCGATCAACCCGCCGGTTGGCGGCAACCCG GTGCAGTACCAGACCGTCACCGCATCGCCGGCCAACGGCGCGCAGATCACCTTCCTCACCAACGCCAGCGCCCAGTACCG CATGAACCTGGCTTACGTGCCGGAAGCAATCACGATGGTCACGGCCGACCTCGAACTGCCGAAGGGCGTGCACGAGGCCT ATCGCGAAACGTACGACAACACGTCGATGCGCATCGTGACGGCCTACAACGTGCAGACCGACCAGTTCATCACCCGTCTC GACATCCTGTACGGCTTCAAGGCTCTGCGCCCTGAATGGATCGTGCGTGTCGCTGACGCGGTGTAA
Upstream 100 bases:
>100_bases TCAGCGGCTCTGGTGCGGCCGACGTCGACCTCTCAAAAGCAAGTCTCGATGACTTCATGGAGCGACGCAACCGGGAGGCA CCAGTCAAAAGGTGACCTAG
Downstream 100 bases:
>100_bases ATCCGGCGTTTTCTCCGTGTGAAAGCGGCCCTTCGGGGCCGCTTTTCATTGGGGCTCATCCATGCATAAGAACAACCTTC TGGAGGACGAGTACGTGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MANTILTIDMITREALRLFKNSNAFLKSIDRQYDEDFAKSGAKIGSALRVRLPNDFTVRRGAAASVQGTNEQKTSLVMAN QIGVDIQFSSAERALSLDDYSERILKPAINDIAGQIAADIMGGMDGLVPAGTLYPDTQLPASNLVGKFDGSNNLLNADLN TFLSANARLNKLSAPGNRKIVLDPITEARMVGSLAGLLNPSNEISEQFLTGQMKRGLGFTWMMDQTVLAHTTGAYGTPPT VSGANQSGSGLGTMTLNVSALNGPVNAGDVFTIAGVFAVNRVTKQAYPELQQFTVVQAAAAGATSLSIYPSINPPVGGNP VQYQTVTASPANGAQITFLTNASAQYRMNLAYVPEAITMVTADLELPKGVHEAYRETYDNTSMRIVTAYNVQTDQFITRL DILYGFKALRPEWIVRVADAV
Sequences:
>Translated_421_residues MANTILTIDMITREALRLFKNSNAFLKSIDRQYDEDFAKSGAKIGSALRVRLPNDFTVRRGAAASVQGTNEQKTSLVMAN QIGVDIQFSSAERALSLDDYSERILKPAINDIAGQIAADIMGGMDGLVPAGTLYPDTQLPASNLVGKFDGSNNLLNADLN TFLSANARLNKLSAPGNRKIVLDPITEARMVGSLAGLLNPSNEISEQFLTGQMKRGLGFTWMMDQTVLAHTTGAYGTPPT VSGANQSGSGLGTMTLNVSALNGPVNAGDVFTIAGVFAVNRVTKQAYPELQQFTVVQAAAAGATSLSIYPSINPPVGGNP VQYQTVTASPANGAQITFLTNASAQYRMNLAYVPEAITMVTADLELPKGVHEAYRETYDNTSMRIVTAYNVQTDQFITRL DILYGFKALRPEWIVRVADAV >Mature_420_residues ANTILTIDMITREALRLFKNSNAFLKSIDRQYDEDFAKSGAKIGSALRVRLPNDFTVRRGAAASVQGTNEQKTSLVMANQ IGVDIQFSSAERALSLDDYSERILKPAINDIAGQIAADIMGGMDGLVPAGTLYPDTQLPASNLVGKFDGSNNLLNADLNT FLSANARLNKLSAPGNRKIVLDPITEARMVGSLAGLLNPSNEISEQFLTGQMKRGLGFTWMMDQTVLAHTTGAYGTPPTV SGANQSGSGLGTMTLNVSALNGPVNAGDVFTIAGVFAVNRVTKQAYPELQQFTVVQAAAAGATSLSIYPSINPPVGGNPV QYQTVTASPANGAQITFLTNASAQYRMNLAYVPEAITMVTADLELPKGVHEAYRETYDNTSMRIVTAYNVQTDQFITRLD ILYGFKALRPEWIVRVADAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45100; Mature: 44969
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANTILTIDMITREALRLFKNSNAFLKSIDRQYDEDFAKSGAKIGSALRVRLPNDFTVRR CCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCEEEC GAAASVQGTNEQKTSLVMANQIGVDIQFSSAERALSLDDYSERILKPAINDIAGQIAADI CCCCCCCCCCCHHHEEEEEECCCEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH MGGMDGLVPAGTLYPDTQLPASNLVGKFDGSNNLLNADLNTFLSANARLNKLSAPGNRKI HCCCCCCCCCCCCCCCCCCCHHHCCEEECCCCCEEECCHHHHHCCCCCEEECCCCCCCEE VLDPITEARMVGSLAGLLNPSNEISEQFLTGQMKRGLGFTWMMDQTVLAHTTGAYGTPPT EECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCC VSGANQSGSGLGTMTLNVSALNGPVNAGDVFTIAGVFAVNRVTKQAYPELQQFTVVQAAA CCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGATSLSIYPSINPPVGGNPVQYQTVTASPANGAQITFLTNASAQYRMNLAYVPEAITMV CCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEEECCCEEEEE TADLELPKGVHEAYRETYDNTSMRIVTAYNVQTDQFITRLDILYGFKALRPEWIVRVADA EECCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHEECCC V C >Mature Secondary Structure ANTILTIDMITREALRLFKNSNAFLKSIDRQYDEDFAKSGAKIGSALRVRLPNDFTVRR CCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCEEEC GAAASVQGTNEQKTSLVMANQIGVDIQFSSAERALSLDDYSERILKPAINDIAGQIAADI CCCCCCCCCCCHHHEEEEEECCCEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH MGGMDGLVPAGTLYPDTQLPASNLVGKFDGSNNLLNADLNTFLSANARLNKLSAPGNRKI HCCCCCCCCCCCCCCCCCCCHHHCCEEECCCCCEEECCHHHHHCCCCCEEECCCCCCCEE VLDPITEARMVGSLAGLLNPSNEISEQFLTGQMKRGLGFTWMMDQTVLAHTTGAYGTPPT EECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCC VSGANQSGSGLGTMTLNVSALNGPVNAGDVFTIAGVFAVNRVTKQAYPELQQFTVVQAAA CCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGATSLSIYPSINPPVGGNPVQYQTVTASPANGAQITFLTNASAQYRMNLAYVPEAITMV CCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEEECCCEEEEE TADLELPKGVHEAYRETYDNTSMRIVTAYNVQTDQFITRLDILYGFKALRPEWIVRVADA EECCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHEECCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA