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The map label for this gene is 187929339

Identifier: 187929339

GI number: 187929339

Start: 2377600

End: 2378562

Strand: Direct

Name: 187929339

Synonym: Rpic_2260

Alternate gene names: NA

Gene position: 2377600-2378562 (Clockwise)

Preceding gene: 187929338

Following gene: 187929340

Centisome position: 60.31

GC content: 63.34

Gene sequence:

>963_bases
ATGACAAACAATAACTATCCGCGCGATCTCATCGGTTACGGCAAGAACCCGCCGAACGCCAATTGGCCGGGCGGCGCGCG
CGTCGCCCTGCAGTTCGTCCTCAACTACGAGGAAGGCGGTGAAAACTGCGTCTTGCACGGCGATGCCGGCTCCGAGCAGT
TCCTCTCTGAGATCATCGGCGCCGCGGCCTACCCGGCCCGCCACATGAGCATGGAGGGGATCTACGAATACGGATCGCGC
GCGGGCGTGTGGCGCATCCTGCGCGAGTTTGAAAAGCGCGGCCTGCCGTTGACGATCTTCGGTGTGTCGATGGCCCTGCA
GCGCCATCCGGACGTGACGCAAGCCTTCGTTGATCTGGGCCACGAAATCGCCTGTCACGGCTGGCGCTGGATTCACTATC
AGAACATCGACGAAGCTACCGAGCGCGAGCACATGCGCATCGGCGTCGAGATCATCCGCGAGTTGACTGGCAATGCGCCG
CTGGGCTGGTACACCGGCCGCGACAGCCCCAACACGCGGCGCCTGGTCGTCGAGCACGGCGGCTTTGCGTACGACGCCGA
CTACTACGGCGACGACCTCCCCTTCTGGACCGAAGTCGAAACCTCGTCCGGCGAGCACAAGCCGCACCTGGTGGTGCCGT
ACACGCTCGACACCAACGACATGCGCTTTGCCAGCCCGCAAGGCTTCAACACGGCCGACCACTTCTACCAGTACCTGAAG
GACGCCTTCGACGTGCTGTACGAAGAAGGCGATCCCAACGGCCTTGCGCAGCCGAAGATGCTGTCGATCGGCATGCACTG
CCGCCTGCTGGGGCGCCCGGCGCGCTTCCGCGCGCTGCAGCGCTTCCTCGACTACGTGCAATCGCACGACAAGGTCTGGA
TCTGCCGCCGTATCGACATCGCGCAGCACTGGATCCAGAACCATCCGTATGCCAAGCAACCCGTTTTGAGCACCACAGCA
TGA

Upstream 100 bases:

>100_bases
CTTGCCTCGTTCATGACGCCGCTGTGATGTCGTGAATTTGGAAAGCCGCATTCCACTGTCTGACCGGTGTTGTATGAAGT
CTCCTCGACATGAAAAAACC

Downstream 100 bases:

>100_bases
GCCAGACCACCTACACCCTCTCGCAACTCAACGGCATGGACGCGTCGCAGTTCGTGCAAGTCCTCGGCGGCGTCTACGAG
CACTCCCCGTGGGTTGCCGA

Product: urate catabolism protein

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Family; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Uricase; Polysaccharide Deacetylase Domain Protein; Hydrolase; Deacetylase

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MTNNNYPRDLIGYGKNPPNANWPGGARVALQFVLNYEEGGENCVLHGDAGSEQFLSEIIGAAAYPARHMSMEGIYEYGSR
AGVWRILREFEKRGLPLTIFGVSMALQRHPDVTQAFVDLGHEIACHGWRWIHYQNIDEATEREHMRIGVEIIRELTGNAP
LGWYTGRDSPNTRRLVVEHGGFAYDADYYGDDLPFWTEVETSSGEHKPHLVVPYTLDTNDMRFASPQGFNTADHFYQYLK
DAFDVLYEEGDPNGLAQPKMLSIGMHCRLLGRPARFRALQRFLDYVQSHDKVWICRRIDIAQHWIQNHPYAKQPVLSTTA

Sequences:

>Translated_320_residues
MTNNNYPRDLIGYGKNPPNANWPGGARVALQFVLNYEEGGENCVLHGDAGSEQFLSEIIGAAAYPARHMSMEGIYEYGSR
AGVWRILREFEKRGLPLTIFGVSMALQRHPDVTQAFVDLGHEIACHGWRWIHYQNIDEATEREHMRIGVEIIRELTGNAP
LGWYTGRDSPNTRRLVVEHGGFAYDADYYGDDLPFWTEVETSSGEHKPHLVVPYTLDTNDMRFASPQGFNTADHFYQYLK
DAFDVLYEEGDPNGLAQPKMLSIGMHCRLLGRPARFRALQRFLDYVQSHDKVWICRRIDIAQHWIQNHPYAKQPVLSTTA
>Mature_319_residues
TNNNYPRDLIGYGKNPPNANWPGGARVALQFVLNYEEGGENCVLHGDAGSEQFLSEIIGAAAYPARHMSMEGIYEYGSRA
GVWRILREFEKRGLPLTIFGVSMALQRHPDVTQAFVDLGHEIACHGWRWIHYQNIDEATEREHMRIGVEIIRELTGNAPL
GWYTGRDSPNTRRLVVEHGGFAYDADYYGDDLPFWTEVETSSGEHKPHLVVPYTLDTNDMRFASPQGFNTADHFYQYLKD
AFDVLYEEGDPNGLAQPKMLSIGMHCRLLGRPARFRALQRFLDYVQSHDKVWICRRIDIAQHWIQNHPYAKQPVLSTTA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36557; Mature: 36426

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNNNYPRDLIGYGKNPPNANWPGGARVALQFVLNYEEGGENCVLHGDAGSEQFLSEIIG
CCCCCCCHHHHCCCCCCCCCCCCCHHHEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHH
AAAYPARHMSMEGIYEYGSRAGVWRILREFEKRGLPLTIFGVSMALQRHPDVTQAFVDLG
HHCCCHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCHHHHHHHCC
HEIACHGWRWIHYQNIDEATEREHMRIGVEIIRELTGNAPLGWYTGRDSPNTRRLVVEHG
CCEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEECC
GFAYDADYYGDDLPFWTEVETSSGEHKPHLVVPYTLDTNDMRFASPQGFNTADHFYQYLK
CEEEECCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCEECCCCCCCHHHHHHHHHH
DAFDVLYEEGDPNGLAQPKMLSIGMHCRLLGRPARFRALQRFLDYVQSHDKVWICRRIDI
HHHHHHHHCCCCCCCCCCHHEEECCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEHHHH
AQHWIQNHPYAKQPVLSTTA
HHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNNNYPRDLIGYGKNPPNANWPGGARVALQFVLNYEEGGENCVLHGDAGSEQFLSEIIG
CCCCCCHHHHCCCCCCCCCCCCCHHHEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHH
AAAYPARHMSMEGIYEYGSRAGVWRILREFEKRGLPLTIFGVSMALQRHPDVTQAFVDLG
HHCCCHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCHHHHHHHCC
HEIACHGWRWIHYQNIDEATEREHMRIGVEIIRELTGNAPLGWYTGRDSPNTRRLVVEHG
CCEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEECC
GFAYDADYYGDDLPFWTEVETSSGEHKPHLVVPYTLDTNDMRFASPQGFNTADHFYQYLK
CEEEECCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCEECCCCCCCHHHHHHHHHH
DAFDVLYEEGDPNGLAQPKMLSIGMHCRLLGRPARFRALQRFLDYVQSHDKVWICRRIDI
HHHHHHHHCCCCCCCCCCHHEEECCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEHHHH
AQHWIQNHPYAKQPVLSTTA
HHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA