| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929211
Identifier: 187929211
GI number: 187929211
Start: 2242612
End: 2243472
Strand: Reverse
Name: 187929211
Synonym: Rpic_2132
Alternate gene names: NA
Gene position: 2243472-2242612 (Counterclockwise)
Preceding gene: 187929212
Following gene: 187929210
Centisome position: 56.9
GC content: 65.27
Gene sequence:
>861_bases ATGGGACTGTTTTCCATCTTTTCCTCCCGCAAGAACGCTGAAGGCGAACGCACACGCAGCGCAGCCGCCGGCAGCGCTGC CGATGTGGCTCGCGATGCGGTGCGTGGTTCGCGCGCATCGTCGAATGCTCGCAGCCGCGCCTCCCGTCGAACCGACGATG ATGACGACGGCCTTGACCCCGAACTCCCGCAAAAACAACGCGCTCGCCGCCGCCTGATCGGCGCGGTGGTGCTGGTTGGC GCCGCTGTGATCGTGCTGCCCCTCGTGTTTGACGCCAAGCCGCGCCCCGTGACCGATGCCGTGGCCGTGCAGATCCAGGA TCAGCCGGTCGATCGTGGCGCCAAGGCCTCCACCGATGAGCCGAAGGTCGCCAGCCGGCGTTCTGCGTCGCGTCCTGCGG TTTCGTCGACGGATCAGGCGCAGGCGCTTGACCAGGGCGAAGAGGTGGTCGCGAGCAACGATGCGCCGCCAGCAGCTCAG AACGCGCCGGCCGCAGTCAAGCCGGCGACACCGCCCAAGCCTGTCGCCAGTCTGACGCCACCCGCTGAATCCAAGCCCGC AACGAAACCTGCGCAACCGGCTGCCCAGCCTGCACAGCAAGCGGCTGCAACGAGCACCGATGCCAATGGCGGCAAGTTCA TCCTGCTGATCGGCGCCTTCGCTTCCGAAGACCGTGCCCGAAATTGGCTGGGCAAGCTCAAGAGCGAGAAGATTCCGGGT TACATCGAACACAAGAAGGTGCCTGAAAAGGGCGATCTCGCCTTGCTGCGTGCAGGCCCGTTCAACGATCGTGCATCGGC GGAAGCGGCGCAGAAGCGTGCCGAGCAGATTGGCCTGACGCCTAAACTCGTGCAGCAATGA
Upstream 100 bases:
>100_bases GCGACCGAGGATGATAGAATCGTGGTCTTCGGATCGTTCTACACCGTTGCCGGCGTGCTGGCGGAGCGCAAGAGTCGCGC GCACTAAAACCGGGGCCCTC
Downstream 100 bases:
>100_bases CGATGCGGCCGACCGTGTACCCAGCGCGCTCGTCGGATTTGCTGACGGTTCACGCTGCATTCCGCCACAGTCAATCCAAG CCGCAGCCCGATGCAACCGA
Product: Sporulation domain-containing protein
Products: NA
Alternate protein names: Sporulation ; Sporulation Domain-Containing Protein
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MGLFSIFSSRKNAEGERTRSAAAGSAADVARDAVRGSRASSNARSRASRRTDDDDDGLDPELPQKQRARRRLIGAVVLVG AAVIVLPLVFDAKPRPVTDAVAVQIQDQPVDRGAKASTDEPKVASRRSASRPAVSSTDQAQALDQGEEVVASNDAPPAAQ NAPAAVKPATPPKPVASLTPPAESKPATKPAQPAAQPAQQAAATSTDANGGKFILLIGAFASEDRARNWLGKLKSEKIPG YIEHKKVPEKGDLALLRAGPFNDRASAEAAQKRAEQIGLTPKLVQQ
Sequences:
>Translated_286_residues MGLFSIFSSRKNAEGERTRSAAAGSAADVARDAVRGSRASSNARSRASRRTDDDDDGLDPELPQKQRARRRLIGAVVLVG AAVIVLPLVFDAKPRPVTDAVAVQIQDQPVDRGAKASTDEPKVASRRSASRPAVSSTDQAQALDQGEEVVASNDAPPAAQ NAPAAVKPATPPKPVASLTPPAESKPATKPAQPAAQPAQQAAATSTDANGGKFILLIGAFASEDRARNWLGKLKSEKIPG YIEHKKVPEKGDLALLRAGPFNDRASAEAAQKRAEQIGLTPKLVQQ >Mature_285_residues GLFSIFSSRKNAEGERTRSAAAGSAADVARDAVRGSRASSNARSRASRRTDDDDDGLDPELPQKQRARRRLIGAVVLVGA AVIVLPLVFDAKPRPVTDAVAVQIQDQPVDRGAKASTDEPKVASRRSASRPAVSSTDQAQALDQGEEVVASNDAPPAAQN APAAVKPATPPKPVASLTPPAESKPATKPAQPAAQPAQQAAATSTDANGGKFILLIGAFASEDRARNWLGKLKSEKIPGY IEHKKVPEKGDLALLRAGPFNDRASAEAAQKRAEQIGLTPKLVQQ
Specific function: Unknown
COG id: COG3147
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29921; Mature: 29790
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFSIFSSRKNAEGERTRSAAAGSAADVARDAVRGSRASSNARSRASRRTDDDDDGLDP CCHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCC ELPQKQRARRRLIGAVVLVGAAVIVLPLVFDAKPRPVTDAVAVQIQDQPVDRGAKASTDE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCC PKVASRRSASRPAVSSTDQAQALDQGEEVVASNDAPPAAQNAPAAVKPATPPKPVASLTP CHHHHHHCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAESKPATKPAQPAAQPAQQAAATSTDANGGKFILLIGAFASEDRARNWLGKLKSEKIPG CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCC YIEHKKVPEKGDLALLRAGPFNDRASAEAAQKRAEQIGLTPKLVQQ HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCC >Mature Secondary Structure GLFSIFSSRKNAEGERTRSAAAGSAADVARDAVRGSRASSNARSRASRRTDDDDDGLDP CHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCC ELPQKQRARRRLIGAVVLVGAAVIVLPLVFDAKPRPVTDAVAVQIQDQPVDRGAKASTDE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCC PKVASRRSASRPAVSSTDQAQALDQGEEVVASNDAPPAAQNAPAAVKPATPPKPVASLTP CHHHHHHCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAESKPATKPAQPAAQPAQQAAATSTDANGGKFILLIGAFASEDRARNWLGKLKSEKIPG CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCC YIEHKKVPEKGDLALLRAGPFNDRASAEAAQKRAEQIGLTPKLVQQ HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA