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The map label for this gene is yrdA [C]

Identifier: 187929137

GI number: 187929137

Start: 2169363

End: 2169887

Strand: Direct

Name: yrdA [C]

Synonym: Rpic_2058

Alternate gene names: 187929137

Gene position: 2169363-2169887 (Clockwise)

Preceding gene: 187929136

Following gene: 187929138

Centisome position: 55.02

GC content: 64.95

Gene sequence:

>525_bases
ATGCCTCTGTACCGCCTTTCCGAACACGCCCCGCAGATTGCGGTCACCACATTTGTCGCGGCCGAAGCTACGATCATCGG
CCACGCCGCGCTTGCCGAACACGTAAGCATCTGGCCCGGCGCCGTGGTGCGCGCCGACAACGAGCCGATCGTCATCGGTG
CGGGCAGCAACGTTCAGGAAGGTGCGGTGCTGCATACAGACCCGGGCTGCCCCCTGCAGATCGGCAGCAACGTGACGGTG
GGCCATCAAGCCATGCTGCATGGCTGCACGATCGGCGATGGCGCACTCATCGGCATTCAAGCCGTGGTGCTGAACAACGC
CGTCATTGGCGAGGATTCATTGGTGGCGGCCGGTGCACTGGTCACGGAGGGCAAGACGTTTCCGCCGCGCTCGCTCATTC
TAGGATCGCCTGCCAAGGCGGTGCGCGAGCTGAGCGACGACGAAGTCCGCAACCTGCGCGCCAACGCTCTGAGCTACGTC
GAACGGGCCGCCACCTACCGCCGTGAGTTGACCCGGCTCGACTGA

Upstream 100 bases:

>100_bases
TTTCCCAAACGCGCGGTTTATCGTTCCAAATTACCGCGATAGCATTCGGAGGGAATCTCTAGAGTACGCAAATCGCACAC
GCTGCCCCAGAGATTTGCTC

Downstream 100 bases:

>100_bases
GCTTTCCCCAAAGTCCCGCATTTTTTCTGCTCCACGCAGCCCAGCGCTGCGTGGGGATTCAACACGTCCGCCAACAAGCC
GCGTGCTTGCCGGACATCAC

Product: transferase hexapeptide repeat containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MPLYRLSEHAPQIAVTTFVAAEATIIGHAALAEHVSIWPGAVVRADNEPIVIGAGSNVQEGAVLHTDPGCPLQIGSNVTV
GHQAMLHGCTIGDGALIGIQAVVLNNAVIGEDSLVAAGALVTEGKTFPPRSLILGSPAKAVRELSDDEVRNLRANALSYV
ERAATYRRELTRLD

Sequences:

>Translated_174_residues
MPLYRLSEHAPQIAVTTFVAAEATIIGHAALAEHVSIWPGAVVRADNEPIVIGAGSNVQEGAVLHTDPGCPLQIGSNVTV
GHQAMLHGCTIGDGALIGIQAVVLNNAVIGEDSLVAAGALVTEGKTFPPRSLILGSPAKAVRELSDDEVRNLRANALSYV
ERAATYRRELTRLD
>Mature_173_residues
PLYRLSEHAPQIAVTTFVAAEATIIGHAALAEHVSIWPGAVVRADNEPIVIGAGSNVQEGAVLHTDPGCPLQIGSNVTVG
HQAMLHGCTIGDGALIGIQAVVLNNAVIGEDSLVAAGALVTEGKTFPPRSLILGSPAKAVRELSDDEVRNLRANALSYVE
RAATYRRELTRLD

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=163, Percent_Identity=41.7177914110429, Blast_Score=133, Evalue=5e-33,
Organism=Escherichia coli, GI1787667, Length=149, Percent_Identity=41.6107382550336, Blast_Score=117, Evalue=3e-28,
Organism=Escherichia coli, GI87081681, Length=159, Percent_Identity=38.9937106918239, Blast_Score=116, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18188; Mature: 18057

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLYRLSEHAPQIAVTTFVAAEATIIGHAALAEHVSIWPGAVVRADNEPIVIGAGSNVQE
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCC
GAVLHTDPGCPLQIGSNVTVGHQAMLHGCTIGDGALIGIQAVVLNNAVIGEDSLVAAGAL
CEEEECCCCCCEEECCCEEECHHHHHCCCCCCCCHHHEEEEEEECCEEECCCCCEECCEE
VTEGKTFPPRSLILGSPAKAVRELSDDEVRNLRANALSYVERAATYRRELTRLD
EECCCCCCCCCEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLYRLSEHAPQIAVTTFVAAEATIIGHAALAEHVSIWPGAVVRADNEPIVIGAGSNVQE
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCC
GAVLHTDPGCPLQIGSNVTVGHQAMLHGCTIGDGALIGIQAVVLNNAVIGEDSLVAAGAL
CEEEECCCCCCEEECCCEEECHHHHHCCCCCCCCHHHEEEEEEECCEEECCCCCEECCEE
VTEGKTFPPRSLILGSPAKAVRELSDDEVRNLRANALSYVERAATYRRELTRLD
EECCCCCCCCCEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]