| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is cutM [H]
Identifier: 187929132
GI number: 187929132
Start: 2165776
End: 2166591
Strand: Direct
Name: cutM [H]
Synonym: Rpic_2053
Alternate gene names: 187929132
Gene position: 2165776-2166591 (Clockwise)
Preceding gene: 187929131
Following gene: 187929133
Centisome position: 54.93
GC content: 65.81
Gene sequence:
>816_bases ATGAAACCCCCCGCCTTTGACTATCTGCGCGCAGAGTCCACGCAGCATGCGCTGGAAGCGCTCGCCCATGCAGGTGAAGA CGCCCGTGTACTTGCCGGAGGCCAGTCGCTGATGGCCGTACTGAACATGCGCCTCGCGCAGCCGCAACTGCTGGTCGATA TCTCTCGCACGCATGACCTGAACGCCGTGCGAGTCGAAGACGGCCACCTGGAAGTAAGCGCTGCGGCCACACAGGGCAAC GTGGAGTGGCGTCCGTCGCTCGCCAACGAGGTGCCGCTGCTGGCGCTGGCTTTCCCGCACATCTCGCATTTCCAGATTCG CAACCGCGGCACGGTGTGCGGCTCCATTGCCCACGCCGACCCGAGCGCCGAGCTGCCACTGGTGCTCACTGCGCTCGACG GACAAGTGGTGCTGCGTTCGCTGCGCCGCCGCCGCGTGATGCAGGCCACCGATTTCTTTCAGGGAATGCTGATGACCGCA CGCGAGCCTGACGAGCTGGTGGAAGCCGTGCGCTTCCCGTTGCGGCAGCCCGGTGCGCGCTACGGCTTCACTGAGTTCTC GGCCCGCCATGGGGACTTTGCCCTGGTGGCGTGCGCGGCCATCGTCACCGACGATGCCATCGCCCTTGCCGTGGGCGGAG TAGCAGACCGGCCGATGCTCGAGCGTTGGCCGCGCCTGCACGGCAAGGCACTTACGGAGGCCATCAACGATTTCAGTTGG AAATTGGGCGCGCAAGACGACGCCCATGTCAGCGCGCAGTACCGCCGCCACCTCGTGCGGCAACTGGGCATGCGCGCAAT CGAGGAGGCAAGATGA
Upstream 100 bases:
>100_bases TGCGCCAGTTGTTTGAATCCCTGGGCCGGCAAGCGGGCGGCAAGCCAGTACGCAAACCAGGTTGGATCGCGCGGCTGCTC GCGCTTTTTGGAGCCCGGCG
Downstream 100 bases:
>100_bases GTAAAACCAAGAAAGGCGGCGCGCCTTCCAGTGCGCTTTCTGTGATGCGGCGACAGGAGCACCACCGCATCGCCCTGACA TTGAACGGCAGCGCGCGTAC
Product: Carbon-monoxide dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKPPAFDYLRAESTQHALEALAHAGEDARVLAGGQSLMAVLNMRLAQPQLLVDISRTHDLNAVRVEDGHLEVSAAATQGN VEWRPSLANEVPLLALAFPHISHFQIRNRGTVCGSIAHADPSAELPLVLTALDGQVVLRSLRRRRVMQATDFFQGMLMTA REPDELVEAVRFPLRQPGARYGFTEFSARHGDFALVACAAIVTDDAIALAVGGVADRPMLERWPRLHGKALTEAINDFSW KLGAQDDAHVSAQYRRHLVRQLGMRAIEEAR
Sequences:
>Translated_271_residues MKPPAFDYLRAESTQHALEALAHAGEDARVLAGGQSLMAVLNMRLAQPQLLVDISRTHDLNAVRVEDGHLEVSAAATQGN VEWRPSLANEVPLLALAFPHISHFQIRNRGTVCGSIAHADPSAELPLVLTALDGQVVLRSLRRRRVMQATDFFQGMLMTA REPDELVEAVRFPLRQPGARYGFTEFSARHGDFALVACAAIVTDDAIALAVGGVADRPMLERWPRLHGKALTEAINDFSW KLGAQDDAHVSAQYRRHLVRQLGMRAIEEAR >Mature_271_residues MKPPAFDYLRAESTQHALEALAHAGEDARVLAGGQSLMAVLNMRLAQPQLLVDISRTHDLNAVRVEDGHLEVSAAATQGN VEWRPSLANEVPLLALAFPHISHFQIRNRGTVCGSIAHADPSAELPLVLTALDGQVVLRSLRRRRVMQATDFFQGMLMTA REPDELVEAVRFPLRQPGARYGFTEFSARHGDFALVACAAIVTDDAIALAVGGVADRPMLERWPRLHGKALTEAINDFSW KLGAQDDAHVSAQYRRHLVRQLGMRAIEEAR
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1789231, Length=287, Percent_Identity=25.7839721254355, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 29816; Mature: 29816
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPPAFDYLRAESTQHALEALAHAGEDARVLAGGQSLMAVLNMRLAQPQLLVDISRTHDL CCCCCCHHHHHCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCC NAVRVEDGHLEVSAAATQGNVEWRPSLANEVPLLALAFPHISHFQIRNRGTVCGSIAHAD CEEEEECCCEEEEEECCCCCCEECCCCCCCCCEEEEECCCCCEEEECCCCCEEEEECCCC PSAELPLVLTALDGQVVLRSLRRRRVMQATDFFQGMLMTAREPDELVEAVRFPLRQPGAR CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC YGFTEFSARHGDFALVACAAIVTDDAIALAVGGVADRPMLERWPRLHGKALTEAINDFSW CCCHHHCCCCCCHHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCE KLGAQDDAHVSAQYRRHLVRQLGMRAIEEAR ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKPPAFDYLRAESTQHALEALAHAGEDARVLAGGQSLMAVLNMRLAQPQLLVDISRTHDL CCCCCCHHHHHCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCC NAVRVEDGHLEVSAAATQGNVEWRPSLANEVPLLALAFPHISHFQIRNRGTVCGSIAHAD CEEEEECCCEEEEEECCCCCCEECCCCCCCCCEEEEECCCCCEEEECCCCCEEEEECCCC PSAELPLVLTALDGQVVLRSLRRRRVMQATDFFQGMLMTAREPDELVEAVRFPLRQPGAR CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC YGFTEFSARHGDFALVACAAIVTDDAIALAVGGVADRPMLERWPRLHGKALTEAINDFSW CCCHHHCCCCCCHHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCE KLGAQDDAHVSAQYRRHLVRQLGMRAIEEAR ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]