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The map label for this gene is ycgB [H]

Identifier: 187929127

GI number: 187929127

Start: 2155828

End: 2157336

Strand: Reverse

Name: ycgB [H]

Synonym: Rpic_2048

Alternate gene names: 187929127

Gene position: 2157336-2155828 (Counterclockwise)

Preceding gene: 187929128

Following gene: 187929124

Centisome position: 54.72

GC content: 59.97

Gene sequence:

>1509_bases
ATGGCCTATCTATCTACGGGCTCGGAGTGGACCTTCGAGCTGATCAGGCGCTACGACCAAAGCATCGCCCAGATTGCCGC
AGACTTCGGCCTGGACACCTATCCGAACCAGATCGAAATCATTACCGCCGAGCAGATGCTCGATGCCTACGCGTCGTCCG
GCTTGCCGCTGGGCTACAACCATTGGTCATACGGCAAGCACTTCCTGGCGTCCGAACGCGGCTACCAGCGCGGCCTCATG
GGGCTGGCTTACGAGATCGTCATCAATTCGAACCCCTGCATCGCCTACCTGATGGAGGAGAACACGATGCCGATGCAGGC
GCTGACGATCGCACATGCCTGCTATGGCCACAACTCCTTCTTCAAGGGCAATTACCTGTTCCGCACGTGGACGAACGCCG
ACGCGATCGTCGATTACCTGCTTTTCGCCAAGAACTACGTGGCCGAATGCGAGCAGCGCTACGGCGAGCAGGAGGTGGAA
CTGCTGCTCGACTCCTGCCACGCATTGCAGAACTACGGGGTCGATCGTTATCGGCGGCCGAAGAAGCTGTCGATCAACGA
AGAGCAGGCGCGCCAGGCGGAGCGGGAGAAATACCTGGAAGCGCAGGTGAACGACCTGTGGCGCACGCTGCCGACGCACC
GCGCTCGCGCGCTCGCAACGGCCGACGACATACCGGAACCCGATCCGCAATTCCCGCCGGAACCGGAAGAGAACCTGCTG
TACTTCATCGAGAAGAACGCGCCCAAGTTGCAGCCATGGCAACGAGAAATCGTGCGCATCGTGCGCAAGATCGCGCAGTA
CTTCTATCCGCAGCGGCAGACCAAGGTGATGAATGAAGGCTGGGCGACGTTCTGGCACTACACCATCCTGCACAAGCTGT
ACGACGAAAAACTCGTCAACGACGCCTTCATGCTCGAGCTGCTGCAGGCCCACACCAACGTGATCTATCAGCCGCCATTC
AACAGCCCGTATTACAGCGGCCTGAACCCGTACACGCTGGGCTTTCTGATGTTCCAGGACATTCGGCGCATCTGTGAATC
GCCGGAAGAGGAAGACTACCGCTGGGCGCCCGAAATCGCGGGCAGCGATTGGCAGAAGACGCTCGACTTCGCCATGCGCA
ACTTCAAGGACGAGAGCTTCCTCTTGCAATTCCTCTCGCCGCGCGTGATCCGTGAGTTGAAGCTGTTCTCCGTGCTCGAT
GACGACCGCGATGCCAAGCTGCGCGTCACCGCCATCCACGACGAGGATGGCTATCGCAAGATCCGAGAGTTGTTGGCAGG
GCAGTATGACTTGTCGAACATCGAGCCCAACATCCAGGTGACCAACGTCGACGTGGGTGGAGATCGCTCATTGACGCTGC
GCCACTTGCAGAGCAGCCGTCGCCCGCTCGGGTCGAACTACGAAGAGATGCTGCGCCACGTCGTACGCCTGTGGGGCTTC
ACGTGCCGGCTGGAGGTGGTCTACGAAGATGGGCGCCGCGAGATGAAGCACGAGTGCAGGCCTGACTAG

Upstream 100 bases:

>100_bases
CAGGTTGCTCCCAGCCGGGCGCTGCCGCCGTCCAGTGGCAGCGGGTGCCATGGTGAGCACGCCACCTGTGACCCTGAGTG
ATCGACAAACGGGAACGAGC

Downstream 100 bases:

>100_bases
CACCCGTCCGTTTCCACAAGGCCAGCCTCGCGCTGGCTTTCTTCTTATCCACCGCAGGCGCGGATGTCGACCATGCTGCT
CACGGCGCAGCTACATGCCG

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MAYLSTGSEWTFELIRRYDQSIAQIAADFGLDTYPNQIEIITAEQMLDAYASSGLPLGYNHWSYGKHFLASERGYQRGLM
GLAYEIVINSNPCIAYLMEENTMPMQALTIAHACYGHNSFFKGNYLFRTWTNADAIVDYLLFAKNYVAECEQRYGEQEVE
LLLDSCHALQNYGVDRYRRPKKLSINEEQARQAEREKYLEAQVNDLWRTLPTHRARALATADDIPEPDPQFPPEPEENLL
YFIEKNAPKLQPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTILHKLYDEKLVNDAFMLELLQAHTNVIYQPPF
NSPYYSGLNPYTLGFLMFQDIRRICESPEEEDYRWAPEIAGSDWQKTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLD
DDRDAKLRVTAIHDEDGYRKIRELLAGQYDLSNIEPNIQVTNVDVGGDRSLTLRHLQSSRRPLGSNYEEMLRHVVRLWGF
TCRLEVVYEDGRREMKHECRPD

Sequences:

>Translated_502_residues
MAYLSTGSEWTFELIRRYDQSIAQIAADFGLDTYPNQIEIITAEQMLDAYASSGLPLGYNHWSYGKHFLASERGYQRGLM
GLAYEIVINSNPCIAYLMEENTMPMQALTIAHACYGHNSFFKGNYLFRTWTNADAIVDYLLFAKNYVAECEQRYGEQEVE
LLLDSCHALQNYGVDRYRRPKKLSINEEQARQAEREKYLEAQVNDLWRTLPTHRARALATADDIPEPDPQFPPEPEENLL
YFIEKNAPKLQPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTILHKLYDEKLVNDAFMLELLQAHTNVIYQPPF
NSPYYSGLNPYTLGFLMFQDIRRICESPEEEDYRWAPEIAGSDWQKTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLD
DDRDAKLRVTAIHDEDGYRKIRELLAGQYDLSNIEPNIQVTNVDVGGDRSLTLRHLQSSRRPLGSNYEEMLRHVVRLWGF
TCRLEVVYEDGRREMKHECRPD
>Mature_501_residues
AYLSTGSEWTFELIRRYDQSIAQIAADFGLDTYPNQIEIITAEQMLDAYASSGLPLGYNHWSYGKHFLASERGYQRGLMG
LAYEIVINSNPCIAYLMEENTMPMQALTIAHACYGHNSFFKGNYLFRTWTNADAIVDYLLFAKNYVAECEQRYGEQEVEL
LLDSCHALQNYGVDRYRRPKKLSINEEQARQAEREKYLEAQVNDLWRTLPTHRARALATADDIPEPDPQFPPEPEENLLY
FIEKNAPKLQPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTILHKLYDEKLVNDAFMLELLQAHTNVIYQPPFN
SPYYSGLNPYTLGFLMFQDIRRICESPEEEDYRWAPEIAGSDWQKTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLDD
DRDAKLRVTAIHDEDGYRKIRELLAGQYDLSNIEPNIQVTNVDVGGDRSLTLRHLQSSRRPLGSNYEEMLRHVVRLWGFT
CRLEVVYEDGRREMKHECRPD

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=499, Percent_Identity=63.7274549098196, Blast_Score=685, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 58985; Mature: 58854

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYLSTGSEWTFELIRRYDQSIAQIAADFGLDTYPNQIEIITAEQMLDAYASSGLPLGYN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCC
HWSYGKHFLASERGYQRGLMGLAYEIVINSNPCIAYLMEENTMPMQALTIAHACYGHNSF
CCHHHHHHHHHCCCHHHHHHHEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCE
FKGNYLFRTWTNADAIVDYLLFAKNYVAECEQRYGEQEVELLLDSCHALQNYGVDRYRRP
ECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHCCC
KKLSINEEQARQAEREKYLEAQVNDLWRTLPTHRARALATADDIPEPDPQFPPEPEENLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
YFIEKNAPKLQPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTILHKLYDEKLVN
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
DAFMLELLQAHTNVIYQPPFNSPYYSGLNPYTLGFLMFQDIRRICESPEEEDYRWAPEIA
HHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GSDWQKTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLDDDRDAKLRVTAIHDEDGYRK
CCHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHH
IRELLAGQYDLSNIEPNIQVTNVDVGGDRSLTLRHLQSSRRPLGSNYEEMLRHVVRLWGF
HHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
TCRLEVVYEDGRREMKHECRPD
CEEEEEEECCCHHHHHHCCCCC
>Mature Secondary Structure 
AYLSTGSEWTFELIRRYDQSIAQIAADFGLDTYPNQIEIITAEQMLDAYASSGLPLGYN
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCC
HWSYGKHFLASERGYQRGLMGLAYEIVINSNPCIAYLMEENTMPMQALTIAHACYGHNSF
CCHHHHHHHHHCCCHHHHHHHEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCE
FKGNYLFRTWTNADAIVDYLLFAKNYVAECEQRYGEQEVELLLDSCHALQNYGVDRYRRP
ECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHCCC
KKLSINEEQARQAEREKYLEAQVNDLWRTLPTHRARALATADDIPEPDPQFPPEPEENLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
YFIEKNAPKLQPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTILHKLYDEKLVN
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
DAFMLELLQAHTNVIYQPPFNSPYYSGLNPYTLGFLMFQDIRRICESPEEEDYRWAPEIA
HHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GSDWQKTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLDDDRDAKLRVTAIHDEDGYRK
CCHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHH
IRELLAGQYDLSNIEPNIQVTNVDVGGDRSLTLRHLQSSRRPLGSNYEEMLRHVVRLWGF
HHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
TCRLEVVYEDGRREMKHECRPD
CEEEEEEECCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]