Click here to switch to the map view.

The map label for this gene is 187929046

Identifier: 187929046

GI number: 187929046

Start: 2076524

End: 2076859

Strand: Reverse

Name: 187929046

Synonym: Rpic_1966

Alternate gene names: NA

Gene position: 2076859-2076524 (Counterclockwise)

Preceding gene: 187929048

Following gene: 187929044

Centisome position: 52.68

GC content: 63.1

Gene sequence:

>336_bases
ATGCTGAACTGGGTCGAGTATCGGAAGGAATTGCTGGGTCGCATTGGCGAGATCGGTCAGATCACGCCGGATACCGTCAA
GGGCTATAAGACGCTGTCGGCTGCCACGACGGGCAGTCTCGACGCGAAGACGCGTGAGCTGATCGCGCTGGCCGTGGCGG
TGACCACGCGTTGCGATGGCTGTATCACTGTGCACACGGCCGAGGCGATCAAGCATGGCGCAACGCATGAGGAGATTGCC
GACGCGCTGAGCGTGGCGATCTCGCTCAATGCCGGGGCAGCGTTGGTGTACTCGGCGCGCGTGATGGACGCCGTGCAGGC
CTACGAGAAGGCCTGA

Upstream 100 bases:

>100_bases
AGAAATTGCGTGAAAGAAGTATTCAGTGGATCGCCCTTAAAGACAATACTCTTTCCAACGGCGCCGACATCAGGCCAGCG
CCACACCACCGGAGCACATC

Downstream 100 bases:

>100_bases
CCGCGTCGGCTACCGTGCGATCCGCATGCGACAGGTTGCCTGTCGGGTCTCACCGGGCGCGAGCAGGTGCAAGCCCTCGC
CGTGGTGGATCGCATTCGGC

Product: alkylhydroperoxidase like protein

Products: NA

Alternate protein names: ORF 7 [H]

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MLNWVEYRKELLGRIGEIGQITPDTVKGYKTLSAATTGSLDAKTRELIALAVAVTTRCDGCITVHTAEAIKHGATHEEIA
DALSVAISLNAGAALVYSARVMDAVQAYEKA

Sequences:

>Translated_111_residues
MLNWVEYRKELLGRIGEIGQITPDTVKGYKTLSAATTGSLDAKTRELIALAVAVTTRCDGCITVHTAEAIKHGATHEEIA
DALSVAISLNAGAALVYSARVMDAVQAYEKA
>Mature_111_residues
MLNWVEYRKELLGRIGEIGQITPDTVKGYKTLSAATTGSLDAKTRELIALAVAVTTRCDGCITVHTAEAIKHGATHEEIA
DALSVAISLNAGAALVYSARVMDAVQAYEKA

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1053 and P.denitrificans COX locus Uncharacterized protein 4 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 11761; Mature: 11761

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNWVEYRKELLGRIGEIGQITPDTVKGYKTLSAATTGSLDAKTRELIALAVAVTTRCDG
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
CITVHTAEAIKHGATHEEIADALSVAISLNAGAALVYSARVMDAVQAYEKA
EEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNWVEYRKELLGRIGEIGQITPDTVKGYKTLSAATTGSLDAKTRELIALAVAVTTRCDG
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
CITVHTAEAIKHGATHEEIADALSVAISLNAGAALVYSARVMDAVQAYEKA
EEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2061286 [H]