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The map label for this gene is pbpG [H]

Identifier: 187929017

GI number: 187929017

Start: 2043129

End: 2044319

Strand: Reverse

Name: pbpG [H]

Synonym: Rpic_1937

Alternate gene names: 187929017

Gene position: 2044319-2043129 (Counterclockwise)

Preceding gene: 187929018

Following gene: 187929015

Centisome position: 51.85

GC content: 62.38

Gene sequence:

>1191_bases
ATGTCACGGTCTGTTTCCTCATTTTTTCGACGTCTCGGCTTCGTTTCGCTGATGACCGTCGCGCTCGCTGCCGTCTCTGT
CACTACCGTGGCCAACGCTGCCACGACCGACAAAAAACCCGCCGCTAGCAAGAAAGCCAAATCCAAAGGCAAGACCGTCG
CCAATCGCAAGGCCAGCGCCAAAGTCGCGGCTACGAGCGGCGATGAAGTCGCCTCCACCAAAGTCCGCAAGGTCGTCACC
GTCAAAGGCAAGCGTCGCGTGATCATGGTCGAGCGCGGTGCACGTCCGGTGCGTGCGGCGTTCGTGCCGGCGTCCCCGAC
ACTTGGTGAAGCGATGGGACTGCGTTCGACGCCCGATGCGTTGGCGCTGCGTTCCTCCGTTGCGCTGGTGATGGACCAGA
ACAACGGCGAAGTGCTGTTCCAGAAGAATTCGTCGGCCGTGCTGCCGATTGCCTCGATCACCAAGCTGATGACCGCACTG
GTCGTGACCGATGCACATCAGCCGATGGACGAGCTGCTTGAAATTACCGATGAGGATCGCGACTACGAGCGCAACACGGG
CTCGCGCCTGCGCTTCGGCACGATGCTCACGCGCGAAGACCTGCTGCTGCTGGCGCTGATGTCGTCGGAAAACCGTGCAG
CCTCCGCGCTGGGCCGCAACTATCCGGGCGGTCGTCCGGCATTTGTTGCCGCCATGAACCGCAAGGCGCATGAACTCGGC
ATGAACGATACGCACTATGTAGATTCGAACGGCCTGTCTAGCAGCAACGTGTCGAGCGCGCAGGATCTCGCCAAGATCGT
GATAGCTGCCTACAAGGTGCCGCTCATTCGTCAATTCACAACCACCCCCGAACATACGGTCAGCGCCAACGGCCGCACGC
TGCACTACGTCAACACCAACCGTCTGGTGCGCGGCGGCGAATGGGATATCGGCCTGCAGAAGACCGGCTTCATCAACGAA
GCCGGCCGCTGCCTCGTCATGCAGGCCAACGTGCATGGCCGCAATGTCGTGATGGTGTTCCTGGATTCGGCCGGCAACCT
CACGCGCTTTGCGGACGCCACGCGTGTGCGCAATTGGCTGGAGCGCAATCCGCACATCGAGCCGGCCACGCAAGCGGCTG
CGCCGCTGCGGAATGTACCGGTGTCGACGCAGCCCGCCACCGTGCTGGCGTCGGAGCAGCACGGCGCCTGA

Upstream 100 bases:

>100_bases
CCACAGGTCAAACTTTAAGGCCGTGAGCTAAGTCCTTCATCTTGCTAAGAATTTTGTTTTTGCCTACACTTGCGCCATCT
CACGCGCGGGTGATCGAACC

Downstream 100 bases:

>100_bases
GCCACCGCATCACCCAACAAAAAAGCGCGTTCGATGACGCGCTTTTTTGTTGAGCAAAACCGGCGGCTCACTCCGCGCGC
ACGGCGTCCTCTTCATACGT

Product: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1

Products: NA

Alternate protein names: DD-endopeptidase; Penicillin-binding protein 5; PBP-5 [H]

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MSRSVSSFFRRLGFVSLMTVALAAVSVTTVANAATTDKKPAASKKAKSKGKTVANRKASAKVAATSGDEVASTKVRKVVT
VKGKRRVIMVERGARPVRAAFVPASPTLGEAMGLRSTPDALALRSSVALVMDQNNGEVLFQKNSSAVLPIASITKLMTAL
VVTDAHQPMDELLEITDEDRDYERNTGSRLRFGTMLTREDLLLLALMSSENRAASALGRNYPGGRPAFVAAMNRKAHELG
MNDTHYVDSNGLSSSNVSSAQDLAKIVIAAYKVPLIRQFTTTPEHTVSANGRTLHYVNTNRLVRGGEWDIGLQKTGFINE
AGRCLVMQANVHGRNVVMVFLDSAGNLTRFADATRVRNWLERNPHIEPATQAAAPLRNVPVSTQPATVLASEQHGA

Sequences:

>Translated_396_residues
MSRSVSSFFRRLGFVSLMTVALAAVSVTTVANAATTDKKPAASKKAKSKGKTVANRKASAKVAATSGDEVASTKVRKVVT
VKGKRRVIMVERGARPVRAAFVPASPTLGEAMGLRSTPDALALRSSVALVMDQNNGEVLFQKNSSAVLPIASITKLMTAL
VVTDAHQPMDELLEITDEDRDYERNTGSRLRFGTMLTREDLLLLALMSSENRAASALGRNYPGGRPAFVAAMNRKAHELG
MNDTHYVDSNGLSSSNVSSAQDLAKIVIAAYKVPLIRQFTTTPEHTVSANGRTLHYVNTNRLVRGGEWDIGLQKTGFINE
AGRCLVMQANVHGRNVVMVFLDSAGNLTRFADATRVRNWLERNPHIEPATQAAAPLRNVPVSTQPATVLASEQHGA
>Mature_395_residues
SRSVSSFFRRLGFVSLMTVALAAVSVTTVANAATTDKKPAASKKAKSKGKTVANRKASAKVAATSGDEVASTKVRKVVTV
KGKRRVIMVERGARPVRAAFVPASPTLGEAMGLRSTPDALALRSSVALVMDQNNGEVLFQKNSSAVLPIASITKLMTALV
VTDAHQPMDELLEITDEDRDYERNTGSRLRFGTMLTREDLLLLALMSSENRAASALGRNYPGGRPAFVAAMNRKAHELGM
NDTHYVDSNGLSSSNVSSAQDLAKIVIAAYKVPLIRQFTTTPEHTVSANGRTLHYVNTNRLVRGGEWDIGLQKTGFINEA
GRCLVMQANVHGRNVVMVFLDSAGNLTRFADATRVRNWLERNPHIEPATQAAAPLRNVPVSTQPATVLASEQHGA

Specific function: Cell wall formation [H]

COG id: COG1686

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S11 family [H]

Homologues:

Organism=Escherichia coli, GI87082054, Length=239, Percent_Identity=48.1171548117155, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI1787062, Length=262, Percent_Identity=26.7175572519084, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87082022, Length=258, Percent_Identity=27.906976744186, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR018044
- InterPro:   IPR001967 [H]

Pfam domain/function: PF00768 Peptidase_S11 [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 42590; Mature: 42459

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSVSSFFRRLGFVSLMTVALAAVSVTTVANAATTDKKPAASKKAKSKGKTVANRKASA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHCCCCCC
KVAATSGDEVASTKVRKVVTVKGKRRVIMVERGARPVRAAFVPASPTLGEAMGLRSTPDA
EEEECCCCHHHHHHHEEEEEECCCEEEEEEECCCCCEEEEEECCCCCHHHHCCCCCCCHH
LALRSSVALVMDQNNGEVLFQKNSSAVLPIASITKLMTALVVTDAHQPMDELLEITDEDR
HHHHCCEEEEEECCCCEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
DYERNTGSRLRFGTMLTREDLLLLALMSSENRAASALGRNYPGGRPAFVAAMNRKAHELG
CCCCCCCCEEEEEEHHCHHCEEEEEEECCCCHHHHHHCCCCCCCCCCEEEECCCHHHHCC
MNDTHYVDSNGLSSSNVSSAQDLAKIVIAAYKVPLIRQFTTTPEHTVSANGRTLHYVNTN
CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCEECCCCCEEEEEECC
RLVRGGEWDIGLQKTGFINEAGRCLVMQANVHGRNVVMVFLDSAGNLTRFADATRVRNWL
CEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
ERNPHIEPATQAAAPLRNVPVSTQPATVLASEQHGA
HCCCCCCCHHHHHCCHHCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
SRSVSSFFRRLGFVSLMTVALAAVSVTTVANAATTDKKPAASKKAKSKGKTVANRKASA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHCCCCCC
KVAATSGDEVASTKVRKVVTVKGKRRVIMVERGARPVRAAFVPASPTLGEAMGLRSTPDA
EEEECCCCHHHHHHHEEEEEECCCEEEEEEECCCCCEEEEEECCCCCHHHHCCCCCCCHH
LALRSSVALVMDQNNGEVLFQKNSSAVLPIASITKLMTALVVTDAHQPMDELLEITDEDR
HHHHCCEEEEEECCCCEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
DYERNTGSRLRFGTMLTREDLLLLALMSSENRAASALGRNYPGGRPAFVAAMNRKAHELG
CCCCCCCCEEEEEEHHCHHCEEEEEEECCCCHHHHHHCCCCCCCCCCEEEECCCHHHHCC
MNDTHYVDSNGLSSSNVSSAQDLAKIVIAAYKVPLIRQFTTTPEHTVSANGRTLHYVNTN
CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCEECCCCCEEEEEECC
RLVRGGEWDIGLQKTGFINEAGRCLVMQANVHGRNVVMVFLDSAGNLTRFADATRVRNWL
CEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
ERNPHIEPATQAAAPLRNVPVSTQPATVLASEQHGA
HCCCCCCCHHHHHCCHHCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]