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The map label for this gene is lutB [H]

Identifier: 187929014

GI number: 187929014

Start: 2039853

End: 2041262

Strand: Reverse

Name: lutB [H]

Synonym: Rpic_1934

Alternate gene names: 187929014

Gene position: 2041262-2039853 (Counterclockwise)

Preceding gene: 187929015

Following gene: 187929013

Centisome position: 51.78

GC content: 63.19

Gene sequence:

>1410_bases
ATGCAAGTCCGCAGCATGGAATTCAAAGCACGCGCCGGGCAGAAGCTCGCCGACAAGCGCCTGCAGCAGAACCTTACCAA
GCTCTCGACCAAATTCGTCACCGCACGCGCGGCAGCCATCCAGGACATCGATTTTCCGGCTACGCGTGAAGCGCTGAAGG
AGCGCCGCAACCGCGCGTTGGAAAACCTCGACGTCTGGCTCGCCACCTTCGAGGCGGAAGCGACGCGCCGTGGCGCCAAG
GTGCTGTTTGCCGAAACCACGGCCGATGCCGCTCGCCTGGTCGCAGAGATCGCCCGCCAGCACGAGGTCAAGAAGGTCAT
CAAGAGCAAGTCGATGGTGACCGAAGAGATGCGCCTGAACCAGGTGCTCGGCGAGATGGGCGTGCAGAGCATCGAGACCG
ATCTGGGTGAGTACATCCTGCAGATCAACGATAGCGAGCCGCCGTCGCACATTATTGCGCCGGTAGTGCACAAGGATAAG
GAGGAGATTGCTGACCTCTTCGCCAAGACGCACAAGAAGCCGCGTCTGACCGACATTCCCGAGATGACGCGTGAGGCGCG
CGAAGTGCTGCGGCCCGAGTTTCTGTCCGCTGACATGGGCGTGACGGGCGGCAACTTCATCATTGCCGAGACGGGTTCCG
TGGCGATCGTCACCAATGAGGGCAACGAAGGCATGTGCACGATCATGCCGCGCGTGCACGTTGCCGTGACGGGCATCGAG
AAGGTGCTGCCGACGCTCGAGGATCTGGCGACCGTCATGCGCTTGTTGCCGCGTTCGGCGACCGGACAAGCGATCTCGAA
CTATTTCTCGCTGCTGACGGGCCCGCGCGCGCCCGGCGAGAAGGATGGCCCAGAGCATATGTACTTCGTCATCGTCGACG
GCGGCCGCAGTGGCCTGATCGGCGGCGAATTCCAGGAGATGCTGCGCTGTATCCGGTGCGGCGCGTGCATGAACCACTGC
CCGGTCTATCAGAAGATCGGCGGCCATGCGTACGGCTGGGTGTATCCGGGCCCGATGGGCAGCGTGCTGACGCCGAGCTA
CGTGGGGCTGTCGAACGCACTGGACCTTCCGCAAGCGGCCACGCTGTGCGGTGAATGCAATCGCGTGTGTCCTGCGTCCA
TCCCGTTGTCGGATCTGTTGCGTACGCTGCGCGAGAAGCAAATGGAGCGCGAATTGCGCCCGCAAGCGGAGCGCTTTGGC
TTGCGCGTGTGGGGCTTCATGGCACGGCGACCGGCGTTGTACTCGGCCGGTACCTGGGTTGCAGCGCGCGTGCTGCGTTG
GATGGGCGGTGACAAGAAGCTGATCCACTCGCTGCCCGTCGGAAAAGGCTGGACCGACACACGTGACATGCCGGCCCCAG
CAGGCAAGACGTTCCGCGAGCTGTATCGTGAGAAGAAGGCCCGAGCATGA

Upstream 100 bases:

>100_bases
GCCGTATGGGCGACACGCACACGCGCGTGCTGCACATCGCTCAAGTCCTTGCGGGCGACGCGTAATCGCGACGCCAAGAA
CACGACGGAGACGCCATCAC

Downstream 100 bases:

>100_bases
CCAGCGCTGAATCCCTCCAAACGCTGCGCGACGCGCTCGACCGTCACGCAAAGTCGCCCGACCTGCCGCACTTGCTCAAG
CAGTGGCGCGACGACGCAGT

Product: iron-sulfur cluster binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MQVRSMEFKARAGQKLADKRLQQNLTKLSTKFVTARAAAIQDIDFPATREALKERRNRALENLDVWLATFEAEATRRGAK
VLFAETTADAARLVAEIARQHEVKKVIKSKSMVTEEMRLNQVLGEMGVQSIETDLGEYILQINDSEPPSHIIAPVVHKDK
EEIADLFAKTHKKPRLTDIPEMTREAREVLRPEFLSADMGVTGGNFIIAETGSVAIVTNEGNEGMCTIMPRVHVAVTGIE
KVLPTLEDLATVMRLLPRSATGQAISNYFSLLTGPRAPGEKDGPEHMYFVIVDGGRSGLIGGEFQEMLRCIRCGACMNHC
PVYQKIGGHAYGWVYPGPMGSVLTPSYVGLSNALDLPQAATLCGECNRVCPASIPLSDLLRTLREKQMERELRPQAERFG
LRVWGFMARRPALYSAGTWVAARVLRWMGGDKKLIHSLPVGKGWTDTRDMPAPAGKTFRELYREKKARA

Sequences:

>Translated_469_residues
MQVRSMEFKARAGQKLADKRLQQNLTKLSTKFVTARAAAIQDIDFPATREALKERRNRALENLDVWLATFEAEATRRGAK
VLFAETTADAARLVAEIARQHEVKKVIKSKSMVTEEMRLNQVLGEMGVQSIETDLGEYILQINDSEPPSHIIAPVVHKDK
EEIADLFAKTHKKPRLTDIPEMTREAREVLRPEFLSADMGVTGGNFIIAETGSVAIVTNEGNEGMCTIMPRVHVAVTGIE
KVLPTLEDLATVMRLLPRSATGQAISNYFSLLTGPRAPGEKDGPEHMYFVIVDGGRSGLIGGEFQEMLRCIRCGACMNHC
PVYQKIGGHAYGWVYPGPMGSVLTPSYVGLSNALDLPQAATLCGECNRVCPASIPLSDLLRTLREKQMERELRPQAERFG
LRVWGFMARRPALYSAGTWVAARVLRWMGGDKKLIHSLPVGKGWTDTRDMPAPAGKTFRELYREKKARA
>Mature_469_residues
MQVRSMEFKARAGQKLADKRLQQNLTKLSTKFVTARAAAIQDIDFPATREALKERRNRALENLDVWLATFEAEATRRGAK
VLFAETTADAARLVAEIARQHEVKKVIKSKSMVTEEMRLNQVLGEMGVQSIETDLGEYILQINDSEPPSHIIAPVVHKDK
EEIADLFAKTHKKPRLTDIPEMTREAREVLRPEFLSADMGVTGGNFIIAETGSVAIVTNEGNEGMCTIMPRVHVAVTGIE
KVLPTLEDLATVMRLLPRSATGQAISNYFSLLTGPRAPGEKDGPEHMYFVIVDGGRSGLIGGEFQEMLRCIRCGACMNHC
PVYQKIGGHAYGWVYPGPMGSVLTPSYVGLSNALDLPQAATLCGECNRVCPASIPLSDLLRTLREKQMERELRPQAERFG
LRVWGFMARRPALYSAGTWVAARVLRWMGGDKKLIHSLPVGKGWTDTRDMPAPAGKTFRELYREKKARA

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate [H]

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=472, Percent_Identity=39.1949152542373, Blast_Score=382, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 52030; Mature: 52030

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVRSMEFKARAGQKLADKRLQQNLTKLSTKFVTARAAAIQDIDFPATREALKERRNRAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ENLDVWLATFEAEATRRGAKVLFAETTADAARLVAEIARQHEVKKVIKSKSMVTEEMRLN
HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVLGEMGVQSIETDLGEYILQINDSEPPSHIIAPVVHKDKEEIADLFAKTHKKPRLTDIP
HHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCH
EMTREAREVLRPEFLSADMGVTGGNFIIAETGSVAIVTNEGNEGMCTIMPRVHVAVTGIE
HHHHHHHHHHCHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEECCCHHHHHHHHH
KVLPTLEDLATVMRLLPRSATGQAISNYFSLLTGPRAPGEKDGPEHMYFVIVDGGRSGLI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCC
GGEFQEMLRCIRCGACMNHCPVYQKIGGHAYGWVYPGPMGSVLTPSYVGLSNALDLPQAA
CHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCCHHCCCHHCCCCHHH
TLCGECNRVCPASIPLSDLLRTLREKQMERELRPQAERFGLRVWGFMARRPALYSAGTWV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHCCCCHHCCHHHH
AARVLRWMGGDKKLIHSLPVGKGWTDTRDMPAPAGKTFRELYREKKARA
HHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MQVRSMEFKARAGQKLADKRLQQNLTKLSTKFVTARAAAIQDIDFPATREALKERRNRAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ENLDVWLATFEAEATRRGAKVLFAETTADAARLVAEIARQHEVKKVIKSKSMVTEEMRLN
HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVLGEMGVQSIETDLGEYILQINDSEPPSHIIAPVVHKDKEEIADLFAKTHKKPRLTDIP
HHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCH
EMTREAREVLRPEFLSADMGVTGGNFIIAETGSVAIVTNEGNEGMCTIMPRVHVAVTGIE
HHHHHHHHHHCHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEECCCHHHHHHHHH
KVLPTLEDLATVMRLLPRSATGQAISNYFSLLTGPRAPGEKDGPEHMYFVIVDGGRSGLI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCC
GGEFQEMLRCIRCGACMNHCPVYQKIGGHAYGWVYPGPMGSVLTPSYVGLSNALDLPQAA
CHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCCHHCCCHHCCCCHHH
TLCGECNRVCPASIPLSDLLRTLREKQMERELRPQAERFGLRVWGFMARRPALYSAGTWV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHCCCCHHCCHHHH
AARVLRWMGGDKKLIHSLPVGKGWTDTRDMPAPAGKTFRELYREKKARA
HHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA