| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928962
Identifier: 187928962
GI number: 187928962
Start: 1981901
End: 1982653
Strand: Reverse
Name: 187928962
Synonym: Rpic_1881
Alternate gene names: NA
Gene position: 1982653-1981901 (Counterclockwise)
Preceding gene: 187928963
Following gene: 187928961
Centisome position: 50.29
GC content: 57.5
Gene sequence:
>753_bases ATGAAGAATTTCCGCATTGGGCAAATTGTCCCCAGCTCCAATACCACGATGGAGACCGAAATCCCGGCGATGCTGACCTC CCGCTACGCCGAGTTTCCCGATGAACGTTTCACGTTCCACTCAGCCCGCATGCGCATGATGCATGTCACGCCAGAGGAAC TGAAAAACATGGACGTGGCAAGCGACCGCTGCGCGCTTGAATTGAGTGATGCCCGCTGCGATGTCATGGCATATGCTTGC CTGGTCGCCATCATGAGCCAGGGCCGTGGCTATCACCGTGTTTCGCAGGAACGTCTGGCCAGGATTACCGAGCAGAACAA TGCCCCTACGCCTGTGCTCAGTTCCGCCGGTGCCCTGATAGACGCCATCCATGTACAGGGCTACACGAAGGTAGCAATCA TCACGCCATACATGAAGCCGCTCACGCAAACGGTGATCGACTACATCGAGGATTCCGGTATCGAAGTCACCGATTCAATC AGCCTGGAAGTGTCGGACAATCTTGCCGTGGGTCGGCTCGATCCGGCAAACCTTGTCGGCCATGCGGATCGCCTCAACAT CAGCGGCGCCGATGCGGTCGTGCTGTCGGCATGCGTGCAGATGCCGTCGCTGCCATCAATTCAGGTGGTCGAAGACCGGC TCGATCGGCCTGTGTTCTCGGCGGCGACTTCTACGGTCTACCAGATGCTGAAGACGCTTGGGCTGAAGGCCAAGGTTCCG AATGCAGGTTATCTGCTGTCCGGAGCATTCTGA
Upstream 100 bases:
>100_bases CCTACCTCATTGCTTCGGCCATGGTGTTCCTGCTTCAGGAAACCAAGGGCGTGCGTCTCACCAGCGACAACTAATCTCTT CTCGAAGGAAGCCTCTGATC
Downstream 100 bases:
>100_bases AGCGAGCAAACCAGACTGATTGAAGATGCCATGACGACGACCTCCGCAAGAATGGTTGCCATCCTGGATGCCCGCCAGGG CACCGCCCGCACGGTGGCCG
Product: Asp/Glu/hydantoin racemase
Products: fumarate
Alternate protein names: Maleate Cis-Trans Isomerase; Asp/Glu/Hydantoin Racemase; Arylmalonate Decarboxylase; Asp/Glu/Hydantoin Racemase Family Protein; Maleate Cis-Trans Isomerase Protein; Asp/Glu/Hydantoin Racemase Family; Asp/Glu/Hydantoin Racemase Superfamily; Racemase; Decarboxylase; Maleate Isomerase; Ectoine Utilization Protein EutA; Cis-Trans Isomerase
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKNFRIGQIVPSSNTTMETEIPAMLTSRYAEFPDERFTFHSARMRMMHVTPEELKNMDVASDRCALELSDARCDVMAYAC LVAIMSQGRGYHRVSQERLARITEQNNAPTPVLSSAGALIDAIHVQGYTKVAIITPYMKPLTQTVIDYIEDSGIEVTDSI SLEVSDNLAVGRLDPANLVGHADRLNISGADAVVLSACVQMPSLPSIQVVEDRLDRPVFSAATSTVYQMLKTLGLKAKVP NAGYLLSGAF
Sequences:
>Translated_250_residues MKNFRIGQIVPSSNTTMETEIPAMLTSRYAEFPDERFTFHSARMRMMHVTPEELKNMDVASDRCALELSDARCDVMAYAC LVAIMSQGRGYHRVSQERLARITEQNNAPTPVLSSAGALIDAIHVQGYTKVAIITPYMKPLTQTVIDYIEDSGIEVTDSI SLEVSDNLAVGRLDPANLVGHADRLNISGADAVVLSACVQMPSLPSIQVVEDRLDRPVFSAATSTVYQMLKTLGLKAKVP NAGYLLSGAF >Mature_250_residues MKNFRIGQIVPSSNTTMETEIPAMLTSRYAEFPDERFTFHSARMRMMHVTPEELKNMDVASDRCALELSDARCDVMAYAC LVAIMSQGRGYHRVSQERLARITEQNNAPTPVLSSAGALIDAIHVQGYTKVAIITPYMKPLTQTVIDYIEDSGIEVTDSI SLEVSDNLAVGRLDPANLVGHADRLNISGADAVVLSACVQMPSLPSIQVVEDRLDRPVFSAATSTVYQMLKTLGLKAKVP NAGYLLSGAF
Specific function: Unknown
COG id: COG3473
COG function: function code Q; Maleate cis-trans isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.2.1.1
Molecular weight: Translated: 27314; Mature: 27314
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFRIGQIVPSSNTTMETEIPAMLTSRYAEFPDERFTFHSARMRMMHVTPEELKNMDVA CCCCEEEEEECCCCCEECHHHHHHHHHHHHHCCCHHEEHHHHHEEEEECCHHHHHCCCCC SDRCALELSDARCDVMAYACLVAIMSQGRGYHRVSQERLARITEQNNAPTPVLSSAGALI CCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCHHH DAIHVQGYTKVAIITPYMKPLTQTVIDYIEDSGIEVTDSISLEVSDNLAVGRLDPANLVG HHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEECEEEEEECCCEEECCCCHHHHHC HADRLNISGADAVVLSACVQMPSLPSIQVVEDRLDRPVFSAATSTVYQMLKTLGLKAKVP CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEECC NAGYLLSGAF CCCEEEECCC >Mature Secondary Structure MKNFRIGQIVPSSNTTMETEIPAMLTSRYAEFPDERFTFHSARMRMMHVTPEELKNMDVA CCCCEEEEEECCCCCEECHHHHHHHHHHHHHCCCHHEEHHHHHEEEEECCHHHHHCCCCC SDRCALELSDARCDVMAYACLVAIMSQGRGYHRVSQERLARITEQNNAPTPVLSSAGALI CCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCHHH DAIHVQGYTKVAIITPYMKPLTQTVIDYIEDSGIEVTDSISLEVSDNLAVGRLDPANLVG HHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEECEEEEEECCCEEECCCCHHHHHC HADRLNISGADAVVLSACVQMPSLPSIQVVEDRLDRPVFSAATSTVYQMLKTLGLKAKVP CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEECC NAGYLLSGAF CCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: maleate
Specific reaction: maleate = fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA