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The map label for this gene is yjeF [H]

Identifier: 187928941

GI number: 187928941

Start: 1957235

End: 1958830

Strand: Direct

Name: yjeF [H]

Synonym: Rpic_1860

Alternate gene names: 187928941

Gene position: 1957235-1958830 (Clockwise)

Preceding gene: 187928937

Following gene: 187928942

Centisome position: 49.64

GC content: 69.11

Gene sequence:

>1596_bases
ATGTCCTCACACCCTAGCTGGCGCGAAATCCTGATCGACGGCGCACTGGCCGCACACCACGGCGCCGACCTGCTCTTCGG
CACAGCGGGCATCCGCGCGCTGGAAGCAGCTGCGTACCGAACCCTCGAACCCTTCACCTTGATGGCCAGGGCGGGCGAAG
CCGCCGCCGACTGGCTGCAGACGCGCGCGCCACACGGGCATGTCCTGCTCGTTGCCGGCCCAGGCAACAACGGTGGCGAT
GCGCTCGTTGCGGCGACGGTGCTGCATCTGGCGGGGCGCGCCGTCACGGTGTGGCTTGCCGCAGACCCGGCCAAGCTGCC
TGATGACGCGCGCCGCGCCTGGACGGAGGCTTGTGCCGCGAATGTCCCCATTGAACCTCTGCACACGGCCGTTTCGGTGC
CGGCGGCTGCCTCCGTCATCGTCGACGGCCTCTTTGGTATCGGACTCGCCCGGCCGCTGACGGGGTTGCATGCCGCACTG
GTCGACACCATCAACGCCAGCGGCTTGCCGGTGTTTGCGCTGGACATTCCCTCGGGGCTGAACGGCGATACGGGCCAGCC
GCCCGCCCCAGATTCGCCCGTCATTCAGGCACGCGCCACCATCACGTTCCTCGCCGTCAAACCGGGGTTGCTGACCGGTG
ATGGCCGCGACGCCACCGGCGACATCGCGCTGGCCGACTTGCAGGCTGCGCAAGCGGCTTATGACGGCGTGATTGAAGCG
GACGCCTTTGTCAACACGCCGTCACGCTGGCTTGCGCACGTGCCGCGCCGGCGGCATAACGGCCACAAGGGCACATATGG
CAGTGCGGCAATCGTGGGCGGTGCGGCAGGCATGGTCGGAGCGCCGCTGCTGTCGGCGCGCGGAGCGCTCTATCTGGGCG
CGGGCAAGGTGCACGTGGTCTCGCTTGCCGCCGATGCACCGCGCATCGACCCCGCGCAACCGGAATTGATGCTGCACACC
TGGGGCGCACTCGATCTGGGCGGCATGCAGGCGCTGGCCGTGGGCCCCGGCATGGGTACCGGCAAGGAGTCGGAAGCCGC
GCTCGAGCATCTGCTGGACCGCATGCTGTCGGTGCGCACGCCCGCCGTGTTCGACGCCGATGCACTGAACCTCTTTGCGA
AAACGCCCGCCCTGCTCGCGCGTCTCACGCAACTGGCCGGAAGCGGTGTGCCGTTGGTGCTGACGCCGCATCCGCTGGAA
GCCGCGCGACTGCTGCATACCGATGCGCTCGCCGTGCAGCACGATCGGGTGTCCGCCGCCAAGGCGCTTGTCAATCGGAC
GGGCGCGGTGGTCGTGCTCAAAGGCTCGGGCACAGTCATCGCGGCGCCTGGCATCCCGCCGGCCATCAACCCAACCGGCA
ACGGCGGGCTCGCCACCGGCGGCACGGGCGATGTACTGACCGGCATGATCGGCGCACTGCTTGCGCAAGGCATGGGCGCG
CGTGAAGCTGCACTTGCGGCCGTCTGGCTGCATGGTCGTGCGGCCGATGACCTTGTCCACGCGGGTGTGGGCCCCATCGG
GCTGCACGCAAGCGAGCTTTGCGTACCGGCACGGCGTGCGCTCAACGCCTTGCTGGCGTCGGACGTTCGCCGATAG

Upstream 100 bases:

>100_bases
CGGCGATTTGGACATTGCAACAGGCTGGGAAAGGACCGTAAACGCGGGCTATTGTAAGAGAATAGATCGTCATGTCTGCA
CTGTTGAAAGCGTAGTTGCC

Downstream 100 bases:

>100_bases
AAACACGTCATACAGCACCGTTATACTGCCCACTCGTTTTCCGGCCCCTACCTCACGTCACATCACGCCGTATGCCTACA
GCCCTACCCGCCTGGCAGTC

Product: carbohydrate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MSSHPSWREILIDGALAAHHGADLLFGTAGIRALEAAAYRTLEPFTLMARAGEAAADWLQTRAPHGHVLLVAGPGNNGGD
ALVAATVLHLAGRAVTVWLAADPAKLPDDARRAWTEACAANVPIEPLHTAVSVPAAASVIVDGLFGIGLARPLTGLHAAL
VDTINASGLPVFALDIPSGLNGDTGQPPAPDSPVIQARATITFLAVKPGLLTGDGRDATGDIALADLQAAQAAYDGVIEA
DAFVNTPSRWLAHVPRRRHNGHKGTYGSAAIVGGAAGMVGAPLLSARGALYLGAGKVHVVSLAADAPRIDPAQPELMLHT
WGALDLGGMQALAVGPGMGTGKESEAALEHLLDRMLSVRTPAVFDADALNLFAKTPALLARLTQLAGSGVPLVLTPHPLE
AARLLHTDALAVQHDRVSAAKALVNRTGAVVVLKGSGTVIAAPGIPPAINPTGNGGLATGGTGDVLTGMIGALLAQGMGA
REAALAAVWLHGRAADDLVHAGVGPIGLHASELCVPARRALNALLASDVRR

Sequences:

>Translated_531_residues
MSSHPSWREILIDGALAAHHGADLLFGTAGIRALEAAAYRTLEPFTLMARAGEAAADWLQTRAPHGHVLLVAGPGNNGGD
ALVAATVLHLAGRAVTVWLAADPAKLPDDARRAWTEACAANVPIEPLHTAVSVPAAASVIVDGLFGIGLARPLTGLHAAL
VDTINASGLPVFALDIPSGLNGDTGQPPAPDSPVIQARATITFLAVKPGLLTGDGRDATGDIALADLQAAQAAYDGVIEA
DAFVNTPSRWLAHVPRRRHNGHKGTYGSAAIVGGAAGMVGAPLLSARGALYLGAGKVHVVSLAADAPRIDPAQPELMLHT
WGALDLGGMQALAVGPGMGTGKESEAALEHLLDRMLSVRTPAVFDADALNLFAKTPALLARLTQLAGSGVPLVLTPHPLE
AARLLHTDALAVQHDRVSAAKALVNRTGAVVVLKGSGTVIAAPGIPPAINPTGNGGLATGGTGDVLTGMIGALLAQGMGA
REAALAAVWLHGRAADDLVHAGVGPIGLHASELCVPARRALNALLASDVRR
>Mature_530_residues
SSHPSWREILIDGALAAHHGADLLFGTAGIRALEAAAYRTLEPFTLMARAGEAAADWLQTRAPHGHVLLVAGPGNNGGDA
LVAATVLHLAGRAVTVWLAADPAKLPDDARRAWTEACAANVPIEPLHTAVSVPAAASVIVDGLFGIGLARPLTGLHAALV
DTINASGLPVFALDIPSGLNGDTGQPPAPDSPVIQARATITFLAVKPGLLTGDGRDATGDIALADLQAAQAAYDGVIEAD
AFVNTPSRWLAHVPRRRHNGHKGTYGSAAIVGGAAGMVGAPLLSARGALYLGAGKVHVVSLAADAPRIDPAQPELMLHTW
GALDLGGMQALAVGPGMGTGKESEAALEHLLDRMLSVRTPAVFDADALNLFAKTPALLARLTQLAGSGVPLVLTPHPLEA
ARLLHTDALAVQHDRVSAAKALVNRTGAVVVLKGSGTVIAAPGIPPAINPTGNGGLATGGTGDVLTGMIGALLAQGMGAR
EAALAAVWLHGRAADDLVHAGVGPIGLHASELCVPARRALNALLASDVRR

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI119709830, Length=236, Percent_Identity=30.5084745762712, Blast_Score=74, Evalue=5e-13,
Organism=Escherichia coli, GI1790609, Length=501, Percent_Identity=38.3233532934132, Blast_Score=241, Evalue=6e-65,
Organism=Caenorhabditis elegans, GI17554656, Length=249, Percent_Identity=26.5060240963855, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17509719, Length=142, Percent_Identity=28.8732394366197, Blast_Score=69, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6322698, Length=266, Percent_Identity=25.5639097744361, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 53771; Mature: 53640

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSHPSWREILIDGALAAHHGADLLFGTAGIRALEAAAYRTLEPFTLMARAGEAAADWLQ
CCCCCCHHHHHHHCHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHH
TRAPHGHVLLVAGPGNNGGDALVAATVLHLAGRAVTVWLAADPAKLPDDARRAWTEACAA
HCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHC
NVPIEPLHTAVSVPAAASVIVDGLFGIGLARPLTGLHAALVDTINASGLPVFALDIPSGL
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
NGDTGQPPAPDSPVIQARATITFLAVKPGLLTGDGRDATGDIALADLQAAQAAYDGVIEA
CCCCCCCCCCCCCCEEEEEEEEEEEECCCEEECCCCCCCCCEEEHHHHHHHHHHCCCEEC
DAFVNTPSRWLAHVPRRRHNGHKGTYGSAAIVGGAAGMVGAPLLSARGALYLGAGKVHVV
CHHCCCHHHHHHHCCHHHCCCCCCCCCCCEEECCCCHHHHCHHHHCCCEEEEECCCEEEE
SLAADAPRIDPAQPELMLHTWGALDLGGMQALAVGPGMGTGKESEAALEHLLDRMLSVRT
EEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
PAVFDADALNLFAKTPALLARLTQLAGSGVPLVLTPHPLEAARLLHTDALAVQHDRVSAA
CCEECHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
KALVNRTGAVVVLKGSGTVIAAPGIPPAINPTGNGGLATGGTGDVLTGMIGALLAQGMGA
HHHHCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
REAALAAVWLHGRAADDLVHAGVGPIGLHASELCVPARRALNALLASDVRR
HHHHHEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSHPSWREILIDGALAAHHGADLLFGTAGIRALEAAAYRTLEPFTLMARAGEAAADWLQ
CCCCCHHHHHHHCHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHH
TRAPHGHVLLVAGPGNNGGDALVAATVLHLAGRAVTVWLAADPAKLPDDARRAWTEACAA
HCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHC
NVPIEPLHTAVSVPAAASVIVDGLFGIGLARPLTGLHAALVDTINASGLPVFALDIPSGL
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
NGDTGQPPAPDSPVIQARATITFLAVKPGLLTGDGRDATGDIALADLQAAQAAYDGVIEA
CCCCCCCCCCCCCCEEEEEEEEEEEECCCEEECCCCCCCCCEEEHHHHHHHHHHCCCEEC
DAFVNTPSRWLAHVPRRRHNGHKGTYGSAAIVGGAAGMVGAPLLSARGALYLGAGKVHVV
CHHCCCHHHHHHHCCHHHCCCCCCCCCCCEEECCCCHHHHCHHHHCCCEEEEECCCEEEE
SLAADAPRIDPAQPELMLHTWGALDLGGMQALAVGPGMGTGKESEAALEHLLDRMLSVRT
EEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
PAVFDADALNLFAKTPALLARLTQLAGSGVPLVLTPHPLEAARLLHTDALAVQHDRVSAA
CCEECHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
KALVNRTGAVVVLKGSGTVIAAPGIPPAINPTGNGGLATGGTGDVLTGMIGALLAQGMGA
HHHHCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
REAALAAVWLHGRAADDLVHAGVGPIGLHASELCVPARRALNALLASDVRR
HHHHHEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]