| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is cusR [H]
Identifier: 187928922
GI number: 187928922
Start: 1931392
End: 1932078
Strand: Direct
Name: cusR [H]
Synonym: Rpic_1841
Alternate gene names: 187928922
Gene position: 1931392-1932078 (Clockwise)
Preceding gene: 187928916
Following gene: 187928923
Centisome position: 48.99
GC content: 57.93
Gene sequence:
>687_bases ATGAAGCTCCTTGTTGTCGAAGACGAATCCAAGACCGGCGAATATTTGCAGCAGGGGTTGTCGGAAGCCGGCTTTGTTGT GGACCTTGCCCGCAATGGCTTGGACGGCCGACATCTTGCAATGACGGGCGACTATGACCTCTTGATTCTTGACGTGATGT TGCCCGATCTCGAAGGGTGGCAGATCCTGCACGCACTGCGCTCAACTGAACTGGCTGTGCCGGTGCTGTTTCTGACCGCG CGCGATAGCGTCGCTGATCGGGTCAAGGGCTTGGAGCTGGGCGCGGATGACTACATGGTCAAACCATTTGCATTTGCGGA ATTGCTCGCGCGTGTTCGAACTCTGCTTCGACGAGGCAGTGCGCCATCGCTTGCAGAACGCATCCAGGTGGCCGACCTGG TGCTGGATCTGACTCGCCGTCGTGCTTCCCGTGGCGGTCAGCGAATCACGTTGACCAGTAAGGAGTTCTCGCTGCTGGAA CTGCTAGCCCGCCGTCATGGCGAGGTGTTGCCCCGGTCCCTGATCGCCTCCCAAGTCTGGGACATGAATTTCGACAGCGA CACTAACGTGATCGACGTCGCCATTCGACGCCTGCGCGCCAAAATCGACGATAACTTCGAACCTAAATTGATCCATACCG TCCGTGGCATGGGCTATGTCCTCGAAGGTCCGGAGGACGGGGAGTAA
Upstream 100 bases:
>100_bases ATTACATATTGGTCAGGTTGGTCAGCAACCATGCCGCTCCATGTACGCTACACGATACCGGTCGCACTTTTCGTGCGCCA TAAGTAATAAAGAGACAGAC
Downstream 100 bases:
>100_bases TGAGGCGCCATTCACTAACGGCGCGGCTGACCGCGTATTTCTCCTTGTCATCAGCGGCCATGTTGTTGGGCCTCGGCATT CTGATCGCCCTGGCCATGGA
Product: winged helix family two component heavy metal response transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKLLVVEDESKTGEYLQQGLSEAGFVVDLARNGLDGRHLAMTGDYDLLILDVMLPDLEGWQILHALRSTELAVPVLFLTA RDSVADRVKGLELGADDYMVKPFAFAELLARVRTLLRRGSAPSLAERIQVADLVLDLTRRRASRGGQRITLTSKEFSLLE LLARRHGEVLPRSLIASQVWDMNFDSDTNVIDVAIRRLRAKIDDNFEPKLIHTVRGMGYVLEGPEDGE
Sequences:
>Translated_228_residues MKLLVVEDESKTGEYLQQGLSEAGFVVDLARNGLDGRHLAMTGDYDLLILDVMLPDLEGWQILHALRSTELAVPVLFLTA RDSVADRVKGLELGADDYMVKPFAFAELLARVRTLLRRGSAPSLAERIQVADLVLDLTRRRASRGGQRITLTSKEFSLLE LLARRHGEVLPRSLIASQVWDMNFDSDTNVIDVAIRRLRAKIDDNFEPKLIHTVRGMGYVLEGPEDGE >Mature_228_residues MKLLVVEDESKTGEYLQQGLSEAGFVVDLARNGLDGRHLAMTGDYDLLILDVMLPDLEGWQILHALRSTELAVPVLFLTA RDSVADRVKGLELGADDYMVKPFAFAELLARVRTLLRRGSAPSLAERIQVADLVLDLTRRRASRGGQRITLTSKEFSLLE LLARRHGEVLPRSLIASQVWDMNFDSDTNVIDVAIRRLRAKIDDNFEPKLIHTVRGMGYVLEGPEDGE
Specific function: Member of the two-component regulatory system CusS/CusR. Activates the expression of cusCFBA in response to increasing levels of copper ions, and probably silver ions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786784, Length=228, Percent_Identity=71.4912280701754, Blast_Score=334, Evalue=2e-93, Organism=Escherichia coli, GI87082012, Length=219, Percent_Identity=57.0776255707763, Blast_Score=252, Evalue=2e-68, Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=40.7239819004525, Blast_Score=160, Evalue=6e-41, Organism=Escherichia coli, GI1790552, Length=227, Percent_Identity=37.0044052863436, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=35.1351351351351, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1790860, Length=225, Percent_Identity=40, Blast_Score=131, Evalue=3e-32, Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=35.4545454545455, Blast_Score=127, Evalue=5e-31, Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=37.0044052863436, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI1786911, Length=220, Percent_Identity=36.3636363636364, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=39.0350877192982, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=33.4821428571429, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=32.7433628318584, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=30, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=30.7359307359307, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=33.6448598130841, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1790437, Length=116, Percent_Identity=32.7586206896552, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR006291 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 25481; Mature: 25481
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLVVEDESKTGEYLQQGLSEAGFVVDLARNGLDGRHLAMTGDYDLLILDVMLPDLEGW CEEEEEECCCCHHHHHHHHHHHCCEEEEHHHCCCCCCEEEEECCCCEEEEEECCCCCCHH QILHALRSTELAVPVLFLTARDSVADRVKGLELGADDYMVKPFAFAELLARVRTLLRRGS HHHHHHHHCCHHHEEEEEECCHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHCCC APSLAERIQVADLVLDLTRRRASRGGQRITLTSKEFSLLELLARRHGEVLPRSLIASQVW CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHH DMNFDSDTNVIDVAIRRLRAKIDDNFEPKLIHTVRGMGYVLEGPEDGE CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCCCC >Mature Secondary Structure MKLLVVEDESKTGEYLQQGLSEAGFVVDLARNGLDGRHLAMTGDYDLLILDVMLPDLEGW CEEEEEECCCCHHHHHHHHHHHCCEEEEHHHCCCCCCEEEEECCCCEEEEEECCCCCCHH QILHALRSTELAVPVLFLTARDSVADRVKGLELGADDYMVKPFAFAELLARVRTLLRRGS HHHHHHHHCCHHHEEEEEECCHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHCCC APSLAERIQVADLVLDLTRRRASRGGQRITLTSKEFSLLELLARRHGEVLPRSLIASQVW CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHH DMNFDSDTNVIDVAIRRLRAKIDDNFEPKLIHTVRGMGYVLEGPEDGE CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]