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The map label for this gene is zntR [H]

Identifier: 187928898

GI number: 187928898

Start: 1909727

End: 1910161

Strand: Direct

Name: zntR [H]

Synonym: Rpic_1816

Alternate gene names: 187928898

Gene position: 1909727-1910161 (Clockwise)

Preceding gene: 187928895

Following gene: 187928899

Centisome position: 48.44

GC content: 62.07

Gene sequence:

>435_bases
ATGAGCATTCAGATCGGTGAATTGGCCAAGCGCACAGCCTGTCCGATTCAAACCATCCGCTACTACGAGCGCGAGGGTCT
CTTGCCCTCGCCAGATCGCAGTTCGGGCAACTTTCGGCTGTACGGTGAGCGGCACATTGAACGGCTGCAGTTCATCCTCC
ACTGCCGGTCGCTGGATATGCCGCTTGATGACGTCCGTGTCCTGCTGCGCTACCGCGAACAACCGGCCGAGGATTGCGGT
GGGGTCAACACCCTCCTGGACAAGCACATCCATGAGGTCGAGCGGCGCATCGAAGCGCTGGCGGTGTTAAAGCATCACTT
GTGCGCTCTGCGCGAAACCTGTTCGGCCGGGCGAGCCGCTGAGGCCTGCGGAATCCTGCAAGGGTTGTCCGAAGCTGGCT
GCGCGTGCGACGCCGACGCCCCTCATCAGGGCTGA

Upstream 100 bases:

>100_bases
GCCGCACTCGCTCACAGCACCTCCTAATCGCTTGAAATGGACTGGACTCAAGTACACACTCTATAGCTACTATAGAGTCA
AGAGACCTTTGCCCGACATC

Downstream 100 bases:

>100_bases
CGCGTGGCCGATCGGGCGTCATCTCGATTTCGCGCACTGATCCGACGTGAAACAGGTTGCCTTCGCGCTTGCGGGGAGAT
GCCGATGTCCTTGTTGCGAA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSIQIGELAKRTACPIQTIRYYEREGLLPSPDRSSGNFRLYGERHIERLQFILHCRSLDMPLDDVRVLLRYREQPAEDCG
GVNTLLDKHIHEVERRIEALAVLKHHLCALRETCSAGRAAEACGILQGLSEAGCACDADAPHQG

Sequences:

>Translated_144_residues
MSIQIGELAKRTACPIQTIRYYEREGLLPSPDRSSGNFRLYGERHIERLQFILHCRSLDMPLDDVRVLLRYREQPAEDCG
GVNTLLDKHIHEVERRIEALAVLKHHLCALRETCSAGRAAEACGILQGLSEAGCACDADAPHQG
>Mature_143_residues
SIQIGELAKRTACPIQTIRYYEREGLLPSPDRSSGNFRLYGERHIERLQFILHCRSLDMPLDDVRVLLRYREQPAEDCGG
VNTLLDKHIHEVERRIEALAVLKHHLCALRETCSAGRAAEACGILQGLSEAGCACDADAPHQG

Specific function: Transcriptional regulator [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=136, Percent_Identity=33.8235294117647, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786695, Length=132, Percent_Identity=29.5454545454545, Blast_Score=66, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 16107; Mature: 15975

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQIGELAKRTACPIQTIRYYEREGLLPSPDRSSGNFRLYGERHIERLQFILHCRSLDM
CCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCC
PLDDVRVLLRYREQPAEDCGGVNTLLDKHIHEVERRIEALAVLKHHLCALRETCSAGRAA
CHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EACGILQGLSEAGCACDADAPHQG
HHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SIQIGELAKRTACPIQTIRYYEREGLLPSPDRSSGNFRLYGERHIERLQFILHCRSLDM
CCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCC
PLDDVRVLLRYREQPAEDCGGVNTLLDKHIHEVERRIEALAVLKHHLCALRETCSAGRAA
CHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EACGILQGLSEAGCACDADAPHQG
HHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]