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The map label for this gene is yfdH [C]

Identifier: 187928834

GI number: 187928834

Start: 1846746

End: 1847867

Strand: Direct

Name: yfdH [C]

Synonym: Rpic_1751

Alternate gene names: 187928834

Gene position: 1846746-1847867 (Clockwise)

Preceding gene: 187928833

Following gene: 187928835

Centisome position: 46.84

GC content: 62.12

Gene sequence:

>1122_bases
ATGAATGCCGCCAGCCTGCTGCCAGAGAAGATCTCGGTCGTCGTACCGCTCTTCAATGAAGAAGCTGTCCTGCCACAGTT
TCACTTTCGGCTTCTCCGCGTGATGGATGGATTGGCATCGGACTACGAGATTATCTACGTGGACGATGGCAGCCGCGATC
GATCACTGGCGGTTGCACACAATCTCAAGGCGGCCGAAGCGCGCGTCGGCATTGTCGAGCTGAGTCGCAACTTCGGCAAG
GAAGCCGCGCTAACGGCGGGCCTCGACGTGGCAAGCGGCGACGCCGTTGTGATCATCGACGCCGATCTGCAGGATCCGCC
CGAACTGATTCCGTCGTTGATCGAGAAATGGCGCGAGGGGTTCGACGTGGTGTACGCCACGCGCACTTCCCGGGATGGCG
AATCGTTCCTCAAGAAGTTCACCGCGCACTGGTTTTACCGCCTGATGGGCAAGCTCAGCGATACGGAGATTCCGGCCGAC
ACCGGCGACTTCCGCGTCATGAGCCGTCGTGCCGTTGCCGCACTCGGACAACTCCGGGAGCAGCACCGCTTCATGAAGGG
GCTGTATGCCTGGATAGGATTCCGGCAGACGGCCGTCTTGTATCGGCGTGACGCGCGGGCATCCGGGACGACCAAGTTCA
ACTACCGCAAGCTGTTGCGTTTTGCCGTGGATGGCATCACTGCCTTTTCCACCGTGCCGCTCAAGTTTGCAACCTCGATC
GGCCTGCTTGTTGCCGTTCCCGCCTTTGGCATGGCCGCCTTCATCGTTGGCAAGACGCTGCTCTACGGCGACCCCGTACA
CGGCTACCCATCCATGATGACCGCCCTGCTTCTGCTGGGCGGCCTGCAACTGGTTTTCCTAGGCGTGCTCGGGGAATATG
TTGGGCGTCTGTTCAATGAAGTCAAGCGGCGGCCGGTGTATCTGGTGGCAAGCTATACGGCGCCGATCGGCCCCGGCACC
CCCACCGCTGAGCCGGGGCAGGTGGCCGCAGCGACACGGGGTGGCACCCCGCCTGCAGCAATCTTTCACGCACCCGGATG
CCCGGAAGGCAAAGCTCCTGGCCTCCCCGAGGCTCCTCAGCGGGATGCCATCCTCACGGAAACCCTTGCGCCAAGCCGAT
AG

Upstream 100 bases:

>100_bases
GGCTTCACTACCTGGTTGCTCAAATCCTCTCGACAATTTTCGTCATGTTGGTCAACTACGTACTCCATGCAAATTGGACG
TTCATGAATGGAGCGATGCG

Downstream 100 bases:

>100_bases
ACAGCCCGCCTTCCATGCGCTCTCACGACATGGCCAGCAACTATCGGGATCATGACGTTTTCGAAAGAAAGAGCCTCGTA
TTCAACTTATTCCGTTCTTC

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MNAASLLPEKISVVVPLFNEEAVLPQFHFRLLRVMDGLASDYEIIYVDDGSRDRSLAVAHNLKAAEARVGIVELSRNFGK
EAALTAGLDVASGDAVVIIDADLQDPPELIPSLIEKWREGFDVVYATRTSRDGESFLKKFTAHWFYRLMGKLSDTEIPAD
TGDFRVMSRRAVAALGQLREQHRFMKGLYAWIGFRQTAVLYRRDARASGTTKFNYRKLLRFAVDGITAFSTVPLKFATSI
GLLVAVPAFGMAAFIVGKTLLYGDPVHGYPSMMTALLLLGGLQLVFLGVLGEYVGRLFNEVKRRPVYLVASYTAPIGPGT
PTAEPGQVAAATRGGTPPAAIFHAPGCPEGKAPGLPEAPQRDAILTETLAPSR

Sequences:

>Translated_373_residues
MNAASLLPEKISVVVPLFNEEAVLPQFHFRLLRVMDGLASDYEIIYVDDGSRDRSLAVAHNLKAAEARVGIVELSRNFGK
EAALTAGLDVASGDAVVIIDADLQDPPELIPSLIEKWREGFDVVYATRTSRDGESFLKKFTAHWFYRLMGKLSDTEIPAD
TGDFRVMSRRAVAALGQLREQHRFMKGLYAWIGFRQTAVLYRRDARASGTTKFNYRKLLRFAVDGITAFSTVPLKFATSI
GLLVAVPAFGMAAFIVGKTLLYGDPVHGYPSMMTALLLLGGLQLVFLGVLGEYVGRLFNEVKRRPVYLVASYTAPIGPGT
PTAEPGQVAAATRGGTPPAAIFHAPGCPEGKAPGLPEAPQRDAILTETLAPSR
>Mature_373_residues
MNAASLLPEKISVVVPLFNEEAVLPQFHFRLLRVMDGLASDYEIIYVDDGSRDRSLAVAHNLKAAEARVGIVELSRNFGK
EAALTAGLDVASGDAVVIIDADLQDPPELIPSLIEKWREGFDVVYATRTSRDGESFLKKFTAHWFYRLMGKLSDTEIPAD
TGDFRVMSRRAVAALGQLREQHRFMKGLYAWIGFRQTAVLYRRDARASGTTKFNYRKLLRFAVDGITAFSTVPLKFATSI
GLLVAVPAFGMAAFIVGKTLLYGDPVHGYPSMMTALLLLGGLQLVFLGVLGEYVGRLFNEVKRRPVYLVASYTAPIGPGT
PTAEPGQVAAATRGGTPPAAIFHAPGCPEGKAPGLPEAPQRDAILTETLAPSR

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=128, Percent_Identity=35.15625, Blast_Score=76, Evalue=6e-14,
Organism=Escherichia coli, GI1788692, Length=301, Percent_Identity=46.5116279069767, Blast_Score=284, Evalue=8e-78,
Organism=Escherichia coli, GI1788588, Length=313, Percent_Identity=30.9904153354633, Blast_Score=169, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24585265, Length=168, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 40526; Mature: 40526

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAASLLPEKISVVVPLFNEEAVLPQFHFRLLRVMDGLASDYEIIYVDDGSRDRSLAVAH
CCCHHHCCCHHEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEHHHH
NLKAAEARVGIVELSRNFGKEAALTAGLDVASGDAVVIIDADLQDPPELIPSLIEKWREG
CCHHHHHHHHHHHHHHHCCCHHHHHCCCEECCCCEEEEEECCCCCCHHHHHHHHHHHHCC
FDVVYATRTSRDGESFLKKFTAHWFYRLMGKLSDTEIPADTGDFRVMSRRAVAALGQLRE
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QHRFMKGLYAWIGFRQTAVLYRRDARASGTTKFNYRKLLRFAVDGITAFSTVPLKFATSI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
GLLVAVPAFGMAAFIVGKTLLYGDPVHGYPSMMTALLLLGGLQLVFLGVLGEYVGRLFNE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKRRPVYLVASYTAPIGPGTPTAEPGQVAAATRGGTPPAAIFHAPGCPEGKAPGLPEAPQ
HHCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCC
RDAILTETLAPSR
CCCHHHHHCCCCC
>Mature Secondary Structure
MNAASLLPEKISVVVPLFNEEAVLPQFHFRLLRVMDGLASDYEIIYVDDGSRDRSLAVAH
CCCHHHCCCHHEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEHHHH
NLKAAEARVGIVELSRNFGKEAALTAGLDVASGDAVVIIDADLQDPPELIPSLIEKWREG
CCHHHHHHHHHHHHHHHCCCHHHHHCCCEECCCCEEEEEECCCCCCHHHHHHHHHHHHCC
FDVVYATRTSRDGESFLKKFTAHWFYRLMGKLSDTEIPADTGDFRVMSRRAVAALGQLRE
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QHRFMKGLYAWIGFRQTAVLYRRDARASGTTKFNYRKLLRFAVDGITAFSTVPLKFATSI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
GLLVAVPAFGMAAFIVGKTLLYGDPVHGYPSMMTALLLLGGLQLVFLGVLGEYVGRLFNE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKRRPVYLVASYTAPIGPGTPTAEPGQVAAATRGGTPPAAIFHAPGCPEGKAPGLPEAPQ
HHCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCC
RDAILTETLAPSR
CCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]