| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928821
Identifier: 187928821
GI number: 187928821
Start: 1831612
End: 1832649
Strand: Direct
Name: 187928821
Synonym: Rpic_1738
Alternate gene names: NA
Gene position: 1831612-1832649 (Clockwise)
Preceding gene: 187928815
Following gene: 187928822
Centisome position: 46.46
GC content: 66.67
Gene sequence:
>1038_bases ATGACGCTTGACCCCGCATCCACCGCCGAAGACCAAGCGCTGCAGGCCGATATCGCGGCGCTGCGCGGCCGTTTCACCGA GACGCGGGAGCTGTACCGCGAAGTCTGCGCGCTGCTGTTTTTCCGCTATGGCGTCACACCGACGGCCAACAAGCTCTACA GTCTGGTGCGCAAGGGCAGCATGAGCACACCTTCCCACGTGCTGAACCGGTTCTGGCAGGACCTGCGCGACAAAACACGG GTGACGATCGACCACCCAGATCTCCCCGAGGCCTTGAAGCAGGTTGCCGCCGAGGCAGTGTTGGCCATCTGGCAAGCGGC CTCGTCCGCGGCGGCCACCGAACTGGCCGCACTGCGGGCCGAAGCGCGCCACCAGGCGCACGCCGCCGAAGCCGCGCGCG ACCAAGCCACTGCGGAAAGCGAAACCGCGCGACAAGCGACCGCGGTCATTCAGGCACAGCTGGACTCGGTGCGCGGGCAG CTTGCCGCGCTTCAAGAAATGCTGTCTGCTGAGCGCCAGGGCCACGCAGCAACCGAAGCGCGTCTGCAGGAGACCCGCCG GCAGTTGGACGAGGCGGCACAGCAGCTCACACAGGCTCGGGTTGAATTTGGCGCGCAGCTCGATCGTGAGCGGGCCCGCG CGGATGCAGCAGAAGAGCGTGCCGCCAGCCACGAGAAACGTGCGTTGCGCGAGATCGACCAGGAGCGCACCGCCCGTCAG AAAAGCGACAAGCTGGCCGATGAGCTACGTGCGCAGGTTGTGGCCGCGCGTACCGCGATGCAAGAAAGCGCCGTGACACA TGCCAATGCGATCGGCACGTTGCGCATGGAACTGGGCGCAGTGCGGCAGCAGGCGGAGGGAGCCGCCACGCGGCAGCGTG AAACGGCCGAAGAACTGGTGCAGACCCAGTCGTTGCTGGAGGAGGCGCTACGGCGGGCTGAGCGCGCCGAAACCGAAGCG GAAACAACGCGCCGGCTGGTGAGCGAGTTGAAGAAGGCAACACCAGGACGCGTTGGCCAGCGGACGAAAGCGCCGTGA
Upstream 100 bases:
>100_bases GACAGAAGCGTACTTATGTCTCAAGTTTGTACTTGAAATTATGAAATCACGCGGTTTACGGCATATTATTGACTCATTCG AACTGAAATCCAGGCCCGTC
Downstream 100 bases:
>100_bases TCCTTAATTACTGAAACGTATGATTCGCGCCGCCTTCATTACTTGAAGGCTTATGATAGCGAACTGGCCTCATCTTGGCA TGACCCCCATTTCCTGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MTLDPASTAEDQALQADIAALRGRFTETRELYREVCALLFFRYGVTPTANKLYSLVRKGSMSTPSHVLNRFWQDLRDKTR VTIDHPDLPEALKQVAAEAVLAIWQAASSAAATELAALRAEARHQAHAAEAARDQATAESETARQATAVIQAQLDSVRGQ LAALQEMLSAERQGHAATEARLQETRRQLDEAAQQLTQARVEFGAQLDRERARADAAEERAASHEKRALREIDQERTARQ KSDKLADELRAQVVAARTAMQESAVTHANAIGTLRMELGAVRQQAEGAATRQRETAEELVQTQSLLEEALRRAERAETEA ETTRRLVSELKKATPGRVGQRTKAP
Sequences:
>Translated_345_residues MTLDPASTAEDQALQADIAALRGRFTETRELYREVCALLFFRYGVTPTANKLYSLVRKGSMSTPSHVLNRFWQDLRDKTR VTIDHPDLPEALKQVAAEAVLAIWQAASSAAATELAALRAEARHQAHAAEAARDQATAESETARQATAVIQAQLDSVRGQ LAALQEMLSAERQGHAATEARLQETRRQLDEAAQQLTQARVEFGAQLDRERARADAAEERAASHEKRALREIDQERTARQ KSDKLADELRAQVVAARTAMQESAVTHANAIGTLRMELGAVRQQAEGAATRQRETAEELVQTQSLLEEALRRAERAETEA ETTRRLVSELKKATPGRVGQRTKAP >Mature_344_residues TLDPASTAEDQALQADIAALRGRFTETRELYREVCALLFFRYGVTPTANKLYSLVRKGSMSTPSHVLNRFWQDLRDKTRV TIDHPDLPEALKQVAAEAVLAIWQAASSAAATELAALRAEARHQAHAAEAARDQATAESETARQATAVIQAQLDSVRGQL AALQEMLSAERQGHAATEARLQETRRQLDEAAQQLTQARVEFGAQLDRERARADAAEERAASHEKRALREIDQERTARQK SDKLADELRAQVVAARTAMQESAVTHANAIGTLRMELGAVRQQAEGAATRQRETAEELVQTQSLLEEALRRAERAETEAE TTRRLVSELKKATPGRVGQRTKAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38058; Mature: 37927
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDPASTAEDQALQADIAALRGRFTETRELYREVCALLFFRYGVTPTANKLYSLVRKGS CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC MSTPSHVLNRFWQDLRDKTRVTIDHPDLPEALKQVAAEAVLAIWQAASSAAATELAALRA CCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARHQAHAAEAARDQATAESETARQATAVIQAQLDSVRGQLAALQEMLSAERQGHAATEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RLQETRRQLDEAAQQLTQARVEFGAQLDRERARADAAEERAASHEKRALREIDQERTARQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSDKLADELRAQVVAARTAMQESAVTHANAIGTLRMELGAVRQQAEGAATRQRETAEELV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTQSLLEEALRRAERAETEAETTRRLVSELKKATPGRVGQRTKAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TLDPASTAEDQALQADIAALRGRFTETRELYREVCALLFFRYGVTPTANKLYSLVRKGS CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC MSTPSHVLNRFWQDLRDKTRVTIDHPDLPEALKQVAAEAVLAIWQAASSAAATELAALRA CCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARHQAHAAEAARDQATAESETARQATAVIQAQLDSVRGQLAALQEMLSAERQGHAATEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RLQETRRQLDEAAQQLTQARVEFGAQLDRERARADAAEERAASHEKRALREIDQERTARQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSDKLADELRAQVVAARTAMQESAVTHANAIGTLRMELGAVRQQAEGAATRQRETAEELV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTQSLLEEALRRAERAETEAETTRRLVSELKKATPGRVGQRTKAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA