| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928808
Identifier: 187928808
GI number: 187928808
Start: 1819389
End: 1820864
Strand: Direct
Name: 187928808
Synonym: Rpic_1725
Alternate gene names: NA
Gene position: 1819389-1820864 (Clockwise)
Preceding gene: 187928806
Following gene: 187928811
Centisome position: 46.15
GC content: 59.35
Gene sequence:
>1476_bases ATGTGGCGGATTTTTTACGAATCCCGGCCATCCCTCGCCCTGGCGTCGACGTTCCAGGTCAAGGTGTTGTCCGGTCGAGC CCTGCCGAGTTTTCCCGGCACTCACGGCGATTGCAGTACCGATCTCAAACTGCGGCCTGCCATTGCGTATCGTCGCAAGC TGTTCAAGGCGATCGAGAAGGCTGGTGTTCCGGAGCTTGTTACGTGCATCGGGACGCGATTTGATGAGAGCGCCCGACGG GCGGCCAACATGACCGCTCGCGGCGAGTCTCATGAGCATCCGGTCAGAAACAAGGAAGGCGAGCTGGTGCTCAGTCCGAT CTCGGATTGGTCGACCGAAGACGTTTGGGAGGCGATTGCGCTGTACAGCAGCGGGGAGCTGCCCGGCTACTCCGACTTCG AAGACACGAAGCGCATCTACGCCCACTCCGTGGGTACAAGCTGTGCAGTGGTTGCGGACGCCATTCTTGAGGGAAGTGCG CGCAAGCAGGGCAGGTGCGGCGCTCGCCTTGGATGTCACGTCTGCCAAATGGCTGAAGACAAGAGCCTGGCCAACATGGT GGAGTACGACGAGCGGTATGCCTATGCGGCCGGCTTGCAGCGCCTCAACAGGTTCATCCGCAATACTCGGTTTGACTGGA GCCGCAGGCATTGGATAGGCCGAACGATCAGGGCTGGCTACATCAAGGTCCAACCGGATACCTACCATCCACGGATGCTG CGTGAGATGTTCCGGTACATGCTCCAACTGGACTTCGACGAGCAACAGCGTTCGCGCCGCGCCGGCGAGCCACCGAAGTT CCAGCTTTTGACCAGTGAGATGATCATCGCGATTGATGCAATGCAGTCTCTCAATGGGCTGGCCAAACCGTTTGCTGCAT GGGCCGATTTTCGAGACGTGTTTGAGCGTGGCGTTCGCTACGACATCCCCGATGTTGCACCGGTGCCCGTCACTGCGATA CCCGAGGCCAAGTTCCTCTTCGTCGGCGACGACTGGGATGCTTCGGCTAACAGGAGCGAATGGTCAGGTTTGCGAGACCC GTATGTCGCAGCGCTCACAGAGGGAGCCGCATGTGAGCCACAGCTCGTGATCGACGCAAAGGGGCGGCATATCCTTGACG CTGTCACAGCGTCGCAATTTGGTGTTGACGCAGAAAGCGCAGCTCTCATCGAGGATTTCGAACTGGACCGTTTGTTGCAG ATGCACGATGCAGGTGTGGCGCCAGGCCAAGTGATTGCTGGTTACCGCTGGTACCGGCAGTACGGCTGCCTGCAACTCTC ACACTCGCAGCGCGCAGAGCACGATGAAATTGCTCGCCGAACCGCGTTCAAGGATCGGCGGGGATGGACTCTTGAGTACG ACATACAGACCGTGCTTTCATCGTCGGTGGCGTATGGCGTGCTGCCGGTTGCTGCGAAAGAGGCGTGGCGACATGCCGGC AAGGCCCAACAAGAGCTTGAACTTGCTGCTGCTTGA
Upstream 100 bases:
>100_bases TATGTTTTTGAAGTGTACGTTGCCCCTTGAATCCATAGAGGCGCGCTCCACCGCTTGATCCTATGACCTATTTTCTTTTC AAATCAGCACCTTAGATCGG
Downstream 100 bases:
>100_bases ACGGAATAGCCTCAGTTGCGAAAGAGCCCCGAACTTCGGGGCTCTTTTTTTTCGAGCCTACATTGCGCGTAGCTTGCGAG ACCAACTGGTTTGACCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MWRIFYESRPSLALASTFQVKVLSGRALPSFPGTHGDCSTDLKLRPAIAYRRKLFKAIEKAGVPELVTCIGTRFDESARR AANMTARGESHEHPVRNKEGELVLSPISDWSTEDVWEAIALYSSGELPGYSDFEDTKRIYAHSVGTSCAVVADAILEGSA RKQGRCGARLGCHVCQMAEDKSLANMVEYDERYAYAAGLQRLNRFIRNTRFDWSRRHWIGRTIRAGYIKVQPDTYHPRML REMFRYMLQLDFDEQQRSRRAGEPPKFQLLTSEMIIAIDAMQSLNGLAKPFAAWADFRDVFERGVRYDIPDVAPVPVTAI PEAKFLFVGDDWDASANRSEWSGLRDPYVAALTEGAACEPQLVIDAKGRHILDAVTASQFGVDAESAALIEDFELDRLLQ MHDAGVAPGQVIAGYRWYRQYGCLQLSHSQRAEHDEIARRTAFKDRRGWTLEYDIQTVLSSSVAYGVLPVAAKEAWRHAG KAQQELELAAA
Sequences:
>Translated_491_residues MWRIFYESRPSLALASTFQVKVLSGRALPSFPGTHGDCSTDLKLRPAIAYRRKLFKAIEKAGVPELVTCIGTRFDESARR AANMTARGESHEHPVRNKEGELVLSPISDWSTEDVWEAIALYSSGELPGYSDFEDTKRIYAHSVGTSCAVVADAILEGSA RKQGRCGARLGCHVCQMAEDKSLANMVEYDERYAYAAGLQRLNRFIRNTRFDWSRRHWIGRTIRAGYIKVQPDTYHPRML REMFRYMLQLDFDEQQRSRRAGEPPKFQLLTSEMIIAIDAMQSLNGLAKPFAAWADFRDVFERGVRYDIPDVAPVPVTAI PEAKFLFVGDDWDASANRSEWSGLRDPYVAALTEGAACEPQLVIDAKGRHILDAVTASQFGVDAESAALIEDFELDRLLQ MHDAGVAPGQVIAGYRWYRQYGCLQLSHSQRAEHDEIARRTAFKDRRGWTLEYDIQTVLSSSVAYGVLPVAAKEAWRHAG KAQQELELAAA >Mature_491_residues MWRIFYESRPSLALASTFQVKVLSGRALPSFPGTHGDCSTDLKLRPAIAYRRKLFKAIEKAGVPELVTCIGTRFDESARR AANMTARGESHEHPVRNKEGELVLSPISDWSTEDVWEAIALYSSGELPGYSDFEDTKRIYAHSVGTSCAVVADAILEGSA RKQGRCGARLGCHVCQMAEDKSLANMVEYDERYAYAAGLQRLNRFIRNTRFDWSRRHWIGRTIRAGYIKVQPDTYHPRML REMFRYMLQLDFDEQQRSRRAGEPPKFQLLTSEMIIAIDAMQSLNGLAKPFAAWADFRDVFERGVRYDIPDVAPVPVTAI PEAKFLFVGDDWDASANRSEWSGLRDPYVAALTEGAACEPQLVIDAKGRHILDAVTASQFGVDAESAALIEDFELDRLLQ MHDAGVAPGQVIAGYRWYRQYGCLQLSHSQRAEHDEIARRTAFKDRRGWTLEYDIQTVLSSSVAYGVLPVAAKEAWRHAG KAQQELELAAA
Specific function: Unknown
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55208; Mature: 55208
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRIFYESRPSLALASTFQVKVLSGRALPSFPGTHGDCSTDLKLRPAIAYRRKLFKAIEK CEEEEECCCCCEEEECEEEEEEECCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHH AGVPELVTCIGTRFDESARRAANMTARGESHEHPVRNKEGELVLSPISDWSTEDVWEAIA CCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH LYSSGELPGYSDFEDTKRIYAHSVGTSCAVVADAILEGSARKQGRCGARLGCHVCQMAED HHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC KSLANMVEYDERYAYAAGLQRLNRFIRNTRFDWSRRHWIGRTIRAGYIKVQPDTYHPRML HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEECCEEEECCCCCCHHHH REMFRYMLQLDFDEQQRSRRAGEPPKFQLLTSEMIIAIDAMQSLNGLAKPFAAWADFRDV HHHHHHHHHCCCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FERGVRYDIPDVAPVPVTAIPEAKFLFVGDDWDASANRSEWSGLRDPYVAALTEGAACEP HHCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCHHHCCCCCCHHHHHCCCCCCCC QLVIDAKGRHILDAVTASQFGVDAESAALIEDFELDRLLQMHDAGVAPGQVIAGYRWYRQ EEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YGCLQLSHSQRAEHDEIARRTAFKDRRGWTLEYDIQTVLSSSVAYGVLPVAAKEAWRHAG HCCEEECCHHCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC KAQQELELAAA CHHHHHHHHCC >Mature Secondary Structure MWRIFYESRPSLALASTFQVKVLSGRALPSFPGTHGDCSTDLKLRPAIAYRRKLFKAIEK CEEEEECCCCCEEEECEEEEEEECCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHH AGVPELVTCIGTRFDESARRAANMTARGESHEHPVRNKEGELVLSPISDWSTEDVWEAIA CCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH LYSSGELPGYSDFEDTKRIYAHSVGTSCAVVADAILEGSARKQGRCGARLGCHVCQMAED HHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC KSLANMVEYDERYAYAAGLQRLNRFIRNTRFDWSRRHWIGRTIRAGYIKVQPDTYHPRML HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEECCEEEECCCCCCHHHH REMFRYMLQLDFDEQQRSRRAGEPPKFQLLTSEMIIAIDAMQSLNGLAKPFAAWADFRDV HHHHHHHHHCCCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FERGVRYDIPDVAPVPVTAIPEAKFLFVGDDWDASANRSEWSGLRDPYVAALTEGAACEP HHCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCHHHCCCCCCHHHHHCCCCCCCC QLVIDAKGRHILDAVTASQFGVDAESAALIEDFELDRLLQMHDAGVAPGQVIAGYRWYRQ EEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YGCLQLSHSQRAEHDEIARRTAFKDRRGWTLEYDIQTVLSSSVAYGVLPVAAKEAWRHAG HCCEEECCHHCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC KAQQELELAAA CHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA