| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928775
Identifier: 187928775
GI number: 187928775
Start: 1784080
End: 1785225
Strand: Direct
Name: 187928775
Synonym: Rpic_1692
Alternate gene names: NA
Gene position: 1784080-1785225 (Clockwise)
Preceding gene: 187928774
Following gene: 187928776
Centisome position: 45.25
GC content: 60.99
Gene sequence:
>1146_bases ATGTTTAAGCAAGCCGTGCCGTTCGGACTTCTGGCGGCTCTGGCCTTCGGAGCCTCGGCGCAGGAGACGTCGCAGTCCGG GTTGAAATTTTCCGGTTACTACAAGAGCTTGCTGGAGGAATCGGAAACCATCGTGCCCGGCGGGCAACGCTATCTGCTCG ATCTCAATCGCCTGCGGCTGCAGTTGCAGGGCAAGCTCTCCGAGCACGTCGCCGTGGATCTGCAGTACGACAACGAATTG CTGTTCGGCAGCTACCTGCACACCGCACAGTTCGCAAGCCAGAGCAGTCTCGCGCCGGATCAGTACCTGGATCTCGACGG CAATTACCTGCGTGGCGGCTCGTACTACGGCCAGCACCGGCTGTATCGCGGCAACGTCACCCTGTCATCGGGCGACACCG ATGTGCGCATCGGGCGGCAGCGCATCGCATGGGGAACGGGCCGTTTCTGGAGCCCGCTCGACCTGCTGAACCCCCTGAAC CCGACTGCCATCGAGCGCGAGGAGCGCGTGGGTGTCGACGCGGTGCTGGCCGAGCACAAGCTGGGGCCCATCTCCCGCAT CAGCGCTGTGTACGCGCCGGGGCACGGTGGCGCGGACTCCAGCGCGGCATTCAATTGGCACGCCAACACGCATGGCGTGG ACTATTCCATTGTCGGCGGGCGCTTCGGCAATGAGCAGGTCGCCGGCTTCGATCTCGCGGGGCAGATCGGCACGGCGGGC ATTCGTGGTGAGTTCACGCAAGTGCGTGCCAAGACTGGCTCGACCTATCAACGTGCCGTTCTCGCGCTCGATTATGCGTT TGCGAACACGCTCACGCTTAGCGCCGAGCTCTACTACAACGGCGCCGGCACGACCAATGCCGCCGCGTACGATTTCACGT CGCTGTTGACCGGCAAGATTCGCAGCGTTGCCAAGCACTATGCTGGTGGCTACATGAGCTACGAAATCACGCCGCTGCTC AAGTGGGAGGGCTATGTGGTGGTCAATTTGGACGACCATAGCCGTTTCGTTTCGCCCCTGCTGACCTATTCGATCAAGAC GAATCTCGACTGGCAGATCGGCGCCCAGTTCTTTATGGGCAGCAGTGGCAGTGAGTTTGGACATTTCCATCACATCTACT ACACGCAGATACAGTGGTTCTTCTAA
Upstream 100 bases:
>100_bases GTGGTCCCGCCGGGTATTGCGCTGTTGATTGCCGGCGTGCTGGTTTCGCTCTATCCCGCGGCCAAGGCGGCGCGGCTCGA TCCAGTGCAAGCGATACGCC
Downstream 100 bases:
>100_bases AACGATAGTGCTTGCCGGCTGTCGACGTCCGGAAAGCTGGGCTCGGATGCGTGCATGGCGCGGCAATGGGGAAGGTGGGC AACGAGGAGAAGGAACATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MFKQAVPFGLLAALAFGASAQETSQSGLKFSGYYKSLLEESETIVPGGQRYLLDLNRLRLQLQGKLSEHVAVDLQYDNEL LFGSYLHTAQFASQSSLAPDQYLDLDGNYLRGGSYYGQHRLYRGNVTLSSGDTDVRIGRQRIAWGTGRFWSPLDLLNPLN PTAIEREERVGVDAVLAEHKLGPISRISAVYAPGHGGADSSAAFNWHANTHGVDYSIVGGRFGNEQVAGFDLAGQIGTAG IRGEFTQVRAKTGSTYQRAVLALDYAFANTLTLSAELYYNGAGTTNAAAYDFTSLLTGKIRSVAKHYAGGYMSYEITPLL KWEGYVVVNLDDHSRFVSPLLTYSIKTNLDWQIGAQFFMGSSGSEFGHFHHIYYTQIQWFF
Sequences:
>Translated_381_residues MFKQAVPFGLLAALAFGASAQETSQSGLKFSGYYKSLLEESETIVPGGQRYLLDLNRLRLQLQGKLSEHVAVDLQYDNEL LFGSYLHTAQFASQSSLAPDQYLDLDGNYLRGGSYYGQHRLYRGNVTLSSGDTDVRIGRQRIAWGTGRFWSPLDLLNPLN PTAIEREERVGVDAVLAEHKLGPISRISAVYAPGHGGADSSAAFNWHANTHGVDYSIVGGRFGNEQVAGFDLAGQIGTAG IRGEFTQVRAKTGSTYQRAVLALDYAFANTLTLSAELYYNGAGTTNAAAYDFTSLLTGKIRSVAKHYAGGYMSYEITPLL KWEGYVVVNLDDHSRFVSPLLTYSIKTNLDWQIGAQFFMGSSGSEFGHFHHIYYTQIQWFF >Mature_381_residues MFKQAVPFGLLAALAFGASAQETSQSGLKFSGYYKSLLEESETIVPGGQRYLLDLNRLRLQLQGKLSEHVAVDLQYDNEL LFGSYLHTAQFASQSSLAPDQYLDLDGNYLRGGSYYGQHRLYRGNVTLSSGDTDVRIGRQRIAWGTGRFWSPLDLLNPLN PTAIEREERVGVDAVLAEHKLGPISRISAVYAPGHGGADSSAAFNWHANTHGVDYSIVGGRFGNEQVAGFDLAGQIGTAG IRGEFTQVRAKTGSTYQRAVLALDYAFANTLTLSAELYYNGAGTTNAAAYDFTSLLTGKIRSVAKHYAGGYMSYEITPLL KWEGYVVVNLDDHSRFVSPLLTYSIKTNLDWQIGAQFFMGSSGSEFGHFHHIYYTQIQWFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41977; Mature: 41977
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKQAVPFGLLAALAFGASAQETSQSGLKFSGYYKSLLEESETIVPGGQRYLLDLNRLRL CCCCCCCHHHHHHHHHCCCCHHHHHCCCEEHHHHHHHHHCCCEECCCCCEEEEEHHHEEE QLQGKLSEHVAVDLQYDNELLFGSYLHTAQFASQSSLAPDQYLDLDGNYLRGGSYYGQHR EEECCCCCEEEEEEEECCEEEEHHHHHHHHHCCCCCCCCCCEECCCCCEEECCCCCCCCE LYRGNVTLSSGDTDVRIGRQRIAWGTGRFWSPLDLLNPLNPTAIEREERVGVDAVLAEHK EEECCEEEECCCCCEEECCEEEEECCCCCCCHHHHCCCCCCCCCCHHHHCCHHHHHHHCC LGPISRISAVYAPGHGGADSSAAFNWHANTHGVDYSIVGGRFGNEQVAGFDLAGQIGTAG CCCHHHEEEEEECCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCEECEEECCCCCCCC IRGEFTQVRAKTGSTYQRAVLALDYAFANTLTLSAELYYNGAGTTNAAAYDFTSLLTGKI CCCCCEEEEECCCCHHHHHHHEEHHHHHCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHH RSVAKHYAGGYMSYEITPLLKWEGYVVVNLDDHSRFVSPLLTYSIKTNLDWQIGAQFFMG HHHHHHHCCCEEEEEEEEEEEECCEEEEEECCCHHHHHHHHEEEEECCCCCEECCEEEEC SSGSEFGHFHHIYYTQIQWFF CCCCCCCCEEEEEEEEEEEEC >Mature Secondary Structure MFKQAVPFGLLAALAFGASAQETSQSGLKFSGYYKSLLEESETIVPGGQRYLLDLNRLRL CCCCCCCHHHHHHHHHCCCCHHHHHCCCEEHHHHHHHHHCCCEECCCCCEEEEEHHHEEE QLQGKLSEHVAVDLQYDNELLFGSYLHTAQFASQSSLAPDQYLDLDGNYLRGGSYYGQHR EEECCCCCEEEEEEEECCEEEEHHHHHHHHHCCCCCCCCCCEECCCCCEEECCCCCCCCE LYRGNVTLSSGDTDVRIGRQRIAWGTGRFWSPLDLLNPLNPTAIEREERVGVDAVLAEHK EEECCEEEECCCCCEEECCEEEEECCCCCCCHHHHCCCCCCCCCCHHHHCCHHHHHHHCC LGPISRISAVYAPGHGGADSSAAFNWHANTHGVDYSIVGGRFGNEQVAGFDLAGQIGTAG CCCHHHEEEEEECCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCEECEEECCCCCCCC IRGEFTQVRAKTGSTYQRAVLALDYAFANTLTLSAELYYNGAGTTNAAAYDFTSLLTGKI CCCCCEEEEECCCCHHHHHHHEEHHHHHCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHH RSVAKHYAGGYMSYEITPLLKWEGYVVVNLDDHSRFVSPLLTYSIKTNLDWQIGAQFFMG HHHHHHHCCCEEEEEEEEEEEECCEEEEEECCCHHHHHHHHEEEEECCCCCEECCEEEEC SSGSEFGHFHHIYYTQIQWFF CCCCCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA