| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is yaiN [C]
Identifier: 187928761
GI number: 187928761
Start: 1767433
End: 1767711
Strand: Reverse
Name: yaiN [C]
Synonym: Rpic_1678
Alternate gene names: 187928761
Gene position: 1767711-1767433 (Counterclockwise)
Preceding gene: 187928766
Following gene: 187928760
Centisome position: 44.84
GC content: 60.93
Gene sequence:
>279_bases ATGAGCCACACCATCCGTGAGAAGCAGAAGCTACTCAACCGCGTTCGCCGGATTCGGGGCCAGCTGGATGCCATTGAGCG CGCACTGGAGGAGGAGCAAGGGTGCGCCCCCGTGCTCCAGCAGATCACGAGTTGCCGCGGCGCCATGAATGGCCTGCTGG CCGTCGTGCTGGAAGATCACATACGCACCCACCTGACCGAGGTGGATGACGAACATGAACACGCCGAAGGCAGCGCCAAG GAGCAGCTGATCGAGGTCGTGCACAGCTATTTCAAATGA
Upstream 100 bases:
>100_bases TGCAGAGGGCTACGTCCTTTGGTTCGGTGCAAATGTTGCTCCCTTGGCAGCCGAACTCAATGTAGTATACCCCCCTATAG TATATTTAATGAGGTGATCG
Downstream 100 bases:
>100_bases GCCAGCCATGAGCAATTTCTACGACACGCCGTTCGGTATCGGTCATGACCACGTGTTCCTGGGCGCAGGGCACGAGAAAA ACGAGCGCAAGACATGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MSHTIREKQKLLNRVRRIRGQLDAIERALEEEQGCAPVLQQITSCRGAMNGLLAVVLEDHIRTHLTEVDDEHEHAEGSAK EQLIEVVHSYFK
Sequences:
>Translated_92_residues MSHTIREKQKLLNRVRRIRGQLDAIERALEEEQGCAPVLQQITSCRGAMNGLLAVVLEDHIRTHLTEVDDEHEHAEGSAK EQLIEVVHSYFK >Mature_91_residues SHTIREKQKLLNRVRRIRGQLDAIERALEEEQGCAPVLQQITSCRGAMNGLLAVVLEDHIRTHLTEVDDEHEHAEGSAKE QLIEVVHSYFK
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family [H]
Homologues:
Organism=Escherichia coli, GI87081725, Length=92, Percent_Identity=47.8260869565217, Blast_Score=83, Evalue=3e-18, Organism=Escherichia coli, GI1788422, Length=92, Percent_Identity=43.4782608695652, Blast_Score=74, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003735 [H]
Pfam domain/function: PF02583 DUF156 [H]
EC number: NA
Molecular weight: Translated: 10526; Mature: 10395
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTIREKQKLLNRVRRIRGQLDAIERALEEEQGCAPVLQQITSCRGAMNGLLAVVLEDH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IRTHLTEVDDEHEHAEGSAKEQLIEVVHSYFK HHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHC >Mature Secondary Structure SHTIREKQKLLNRVRRIRGQLDAIERALEEEQGCAPVLQQITSCRGAMNGLLAVVLEDH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IRTHLTEVDDEHEHAEGSAKEQLIEVVHSYFK HHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA