| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928735
Identifier: 187928735
GI number: 187928735
Start: 1736971
End: 1737471
Strand: Reverse
Name: 187928735
Synonym: Rpic_1652
Alternate gene names: NA
Gene position: 1737471-1736971 (Counterclockwise)
Preceding gene: 187928741
Following gene: 187928734
Centisome position: 44.07
GC content: 59.28
Gene sequence:
>501_bases ATGACGAACAACAAGCATGTTGGCTTTCTTGTAGCAGGCGCGCTGCTGATCGCCAGTGCATCGGTCTGGGCCGTTGACGA GCACCACCCCGCCGCAGCGAGCCAGCCTAGTGCGGCAACCCCAGCGAAGACTGCCCCTGCCACGGCAAACTCTGCGGATA CGGAAAAGCGCTTCGAGCAAGCCCGTCAGCAGATGAAGAAGATGCAGGCCCAGATGGACAAGATCCATCAGACCAAGGAC CCGAAGGAACGGCAACGTCTGATGGCCGAGCACATGCAGGCCATGCAGGACACGATGCAGACAATGCACGGTATGGGCGG CCCGATGATGATGGACATGATGGGCGGTCAAGGGATGGGGGCCGGCGGTGCGGCGCCGATGATGGGCGGCTCGGGCATGC CCATGGAGCAGCGCATGAACATGATGGAAAACCGCATGGACATGATGCAGATGATGATGGACCAGATGCTCAAACAGCAG GAACCATCAAAGAAACCTTGA
Upstream 100 bases:
>100_bases GTTGATACGGGTCAAGCGAGAGCAATTCGTTGTGATACGTCAACTGGCGACCACCGATCGCATATCAAAATGAAATCCCA TCATTTCAGGAGGCAGCACC
Downstream 100 bases:
>100_bases CGTTGCCATTGTGGGAAGGTGAATACTGCCCAGAATTGGTCAACAGGCGTGCGTGACGCATACCTGCTGACCGTTAGCTT GAACCTACGCAACATCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTNNKHVGFLVAGALLIASASVWAVDEHHPAAASQPSAATPAKTAPATANSADTEKRFEQARQQMKKMQAQMDKIHQTKD PKERQRLMAEHMQAMQDTMQTMHGMGGPMMMDMMGGQGMGAGGAAPMMGGSGMPMEQRMNMMENRMDMMQMMMDQMLKQQ EPSKKP
Sequences:
>Translated_166_residues MTNNKHVGFLVAGALLIASASVWAVDEHHPAAASQPSAATPAKTAPATANSADTEKRFEQARQQMKKMQAQMDKIHQTKD PKERQRLMAEHMQAMQDTMQTMHGMGGPMMMDMMGGQGMGAGGAAPMMGGSGMPMEQRMNMMENRMDMMQMMMDQMLKQQ EPSKKP >Mature_165_residues TNNKHVGFLVAGALLIASASVWAVDEHHPAAASQPSAATPAKTAPATANSADTEKRFEQARQQMKKMQAQMDKIHQTKDP KERQRLMAEHMQAMQDTMQTMHGMGGPMMMDMMGGQGMGAGGAAPMMGGSGMPMEQRMNMMENRMDMMQMMMDQMLKQQE PSKKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18248; Mature: 18117
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 18.1 %Met (Translated Protein) 18.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 17.6 %Met (Mature Protein) 17.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNKHVGFLVAGALLIASASVWAVDEHHPAAASQPSAATPAKTAPATANSADTEKRFEQ CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH ARQQMKKMQAQMDKIHQTKDPKERQRLMAEHMQAMQDTMQTMHGMGGPMMMDMMGGQGMG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC AGGAAPMMGGSGMPMEQRMNMMENRMDMMQMMMDQMLKQQEPSKKP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TNNKHVGFLVAGALLIASASVWAVDEHHPAAASQPSAATPAKTAPATANSADTEKRFEQ CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH ARQQMKKMQAQMDKIHQTKDPKERQRLMAEHMQAMQDTMQTMHGMGGPMMMDMMGGQGMG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC AGGAAPMMGGSGMPMEQRMNMMENRMDMMQMMMDQMLKQQEPSKKP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA