| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928732
Identifier: 187928732
GI number: 187928732
Start: 1735594
End: 1736013
Strand: Reverse
Name: 187928732
Synonym: Rpic_1649
Alternate gene names: NA
Gene position: 1736013-1735594 (Counterclockwise)
Preceding gene: 187928733
Following gene: 187928731
Centisome position: 44.03
GC content: 64.52
Gene sequence:
>420_bases GTGCGCGCATCGCTTCGCCGGCCGTGGTTCGCCGGATTCCTAGTCATCGCTTTCCTGACAGTTCAACTGGCAGCGGCAGC ATACGCCTGTGCGGCAAGCCGCGGCTCAGCGGAGGTCATGCCCACCATGGCCGATGCGACCGACGCCGGTGCCATGGTGC AGTCGTGCCCCGAGATGGCCATGCAGGCGCAGCAGGATGTGCACCAGCATGACGGCCTCTGTCTTGAGCACTGCCAGAGC GGCACCAAGTCGGCCAATCACGTATCGCCGCAGATTCCCATCTTCCTGCCCGTCCTGATCCGGATGATCACGGCCGAGCC AGTCATCATGGCGGACGGCCAATCGGTCTTGCTCGCCGATGTGGCGCCCCGTGCACCACCACCCCCGATTCCCATCCTGA ACTGCTGTTTCCGCACGTAG
Upstream 100 bases:
>100_bases CGTTTGCGGCAGATCAACCCGTTCGATCATAAGCCGCGTCCGCGTGCACATCGCGCGTAGCCGCTGTTACCATTCGATCC AATCACATCATCTGCAGAAC
Downstream 100 bases:
>100_bases CCTCCGAAGCGACGTATCTCTCACGCCTTGCCGCCTAACCGGCAAGGTGGTCGTTGCTTTCCGGAGGCTTTATGCTTTTG CGTTTTCCCCCACGCGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MRASLRRPWFAGFLVIAFLTVQLAAAAYACAASRGSAEVMPTMADATDAGAMVQSCPEMAMQAQQDVHQHDGLCLEHCQS GTKSANHVSPQIPIFLPVLIRMITAEPVIMADGQSVLLADVAPRAPPPPIPILNCCFRT
Sequences:
>Translated_139_residues MRASLRRPWFAGFLVIAFLTVQLAAAAYACAASRGSAEVMPTMADATDAGAMVQSCPEMAMQAQQDVHQHDGLCLEHCQS GTKSANHVSPQIPIFLPVLIRMITAEPVIMADGQSVLLADVAPRAPPPPIPILNCCFRT >Mature_139_residues MRASLRRPWFAGFLVIAFLTVQLAAAAYACAASRGSAEVMPTMADATDAGAMVQSCPEMAMQAQQDVHQHDGLCLEHCQS GTKSANHVSPQIPIFLPVLIRMITAEPVIMADGQSVLLADVAPRAPPPPIPILNCCFRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14814; Mature: 14814
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASLRRPWFAGFLVIAFLTVQLAAAAYACAASRGSAEVMPTMADATDAGAMVQSCPEMA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHH MQAQQDVHQHDGLCLEHCQSGTKSANHVSPQIPIFLPVLIRMITAEPVIMADGQSVLLAD HHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCEEEEEC VAPRAPPPPIPILNCCFRT CCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MRASLRRPWFAGFLVIAFLTVQLAAAAYACAASRGSAEVMPTMADATDAGAMVQSCPEMA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHH MQAQQDVHQHDGLCLEHCQSGTKSANHVSPQIPIFLPVLIRMITAEPVIMADGQSVLLAD HHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCEEEEEC VAPRAPPPPIPILNCCFRT CCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA