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The map label for this gene is 187928720

Identifier: 187928720

GI number: 187928720

Start: 1716684

End: 1719008

Strand: Direct

Name: 187928720

Synonym: Rpic_1637

Alternate gene names: NA

Gene position: 1716684-1719008 (Clockwise)

Preceding gene: 187928719

Following gene: 187928721

Centisome position: 43.54

GC content: 60.77

Gene sequence:

>2325_bases
ATGCGACCTCTCAAACTGACCCTGTCTGGCTTTCGCGGCATCCTGGATGGGATGCACCGCGACAGTGTGACGGTCGACCT
GCGCGAGCTGCCGACCGGACTGATCGCCGTGATGGGCCCTAACGGTGCCGGCAAAACGACGATCATGGACAACCTGCATC
CGTATCCGCTGATGCCTAGCCATGCATCGAAGATGTCGGCCGATGCGTTTTCGTACTGGGACCACCTCACGGGTACCCGG
GCCGAAAAGGATTTGGAATGGGAGCACGATGGCCAGCAATACCGGTCACAGTTCGCGTTTCGTAATTCTGGCAAGACGCG
CAAGGCCGAGTACTACCTGTTTGTGCTTGGCTCGGACGGCGTATGGCAACCGGTTCAACTGGCAGACGGATCGCTGTCTG
ACGGTAAGGCGGAGACGTACAACCGCTGTGTGGAATCGGTCCTCGGATCATCGGAGGCGTTCTTCACCAGTGTCTTCTCT
GCCCAGAACCGACGGCCGATTGCTGGCTACCAGACCTCTGAAATCAAGAAGTTGCTTGCTGAGCTGCTTGGTCTGGAGCG
GATGCGTGAGCTGTCGGGCAAGGCTATGGACGTGGCGAAGTGCCTCGGCCGTGCTTTGGATGTCGTTCAGCACAACATCA
CCAGCCTGGTTGGTCGGCGCGATCGTGTTGCACGACTCTCCTTGGAGATCGAGCAGGCGGAGGCCTCGTTGGTTGAGACC
CGCCAGGCGCGTGATCGTGAGCTGGAGGCCAATGCGCAGATGGTTCAGGAGCGTGCGACGCTTGCAGCCAAGCAGGCGAG
CAGCACCGTAGCAGAAGCGCGCATGCGTGAGCTTGGCCAACAGAAGGTGGCCCAGGAAGCAAGGCGCCGAACGCTTGACA
ACGACGAACGGGCTGCCGTGCAACGTACCGAGGCGCAAGCCAAGGAACTGGGGGCCGTCATTTCAAGCCGCCGCGCAATC
CTGGCCAGCAGCACCGCCATCCTGGCGGCCGCAACCTCGCGTGATGCTTTGCAATTGACCGTCACGCAGCGACAGTCGGA
GGCAATTCGGCTGCAAGAGGGGATTGCTCAGCTCGAAAAGGTTGTGCCTGACCAATCGCGCATCATCGGCGAATTGCAAA
ACATGGCCGGTCAAGGTGAATCGAAGGCTGTCCTTGAAAAGTCGCTGAAGGGCCAGGCCGACGTCATTGAGTCTGTTCCG
TGCCGGGACAATCCGATGCACTCGACGTGCCCATTGCTGGCTCAGGCGCGCAGGGCGAGCACGGATCTCACGGAAGTGCG
GATCTCGTTGGCAGAGCTTCGAACCGGCTACCGGGACAAGCTCAAGCTCAAGACGGCGCTCGATGAGCAGCTCGCGCCGT
TGGCGGGCCAACGTGCTTCACTTCGAGCACTGCAGGGGCAGGTGGCGGCCGACCAACGGGAGTTGCAACGGCTGACCGAA
CTTGCTGCGCAGAAGCCATTGCTTGACGACGCCCAAGAGGCGCTGGCGAAGGCCGAGCGTGATCTGGTCGAGCTGAACGC
CGAAGCTGCCGCCCGAAAGGAGCGATACCAGCGCGACGTTGTTGCGACGGACGATCAGTTGGCCACGATCAACCGGGAGG
TTACGTCACTGCAAAGTGCCGACGTTACCGGAAAGATCGCGGACTTTGATCGTCAGGTTGCCAGCTCGCGCGAGCGCATT
GCCCAGTTCGAAGGCCGGATTGAAGCACTGATCCGGACTCAGACTGCGCTCAGCACCGAGCGGCAGGGCCTCCTGGTTGA
TCTGGAGGCACTACCCGTTGTGCAGCGTAAGGCAGAGCGGATCTCCGACGAGATTTCGTCGTGGAAGCTGCTCGGCAAGG
CCTTGGGCAATGACGGTGTGATTGCGCTGTCGATCGACGATGCAGGCCCTGAAATCACGAAGAAGGTCAACGACCTGCTC
CTGGCGTGCTATGGACCCCGATTCACAATCGGTATCCACACGCAAACGGAGCTGGCCAACGGCGATAAGCGTGAGGGGTT
TGAGATTCGTGTCCACGACGCTCAGGCTGACAGCGAGAAGGAGTTCGCGGTCATGTCCGGCGGGCAGAAGGTGTGGATCA
ACGAATGCCTGACGCGTGGTATTGCGCTATATCGCGCGCAGGGCGCCGGCACCGCCTTCCAGACGTTGTTCACGGACGAG
GCGGATGGCCCGCTTGATCCGGAGCGCAAGCGCGAGTTCATGAAAATGAAGCGCGAGGTGTTGCGCCAGGGAGGGTATGA
GCGGGAGTTCTTCATCTCGCAAACACCCGATCTGGTCGACGAGGCCGATGCTGTCATCGATGTGGTCGCACTGGCCACTC
AGTAG

Upstream 100 bases:

>100_bases
AGCCGGAAGTCGACGTCGTCGTCACGTATGACGACTCGCGTGAGGTGCTGGAGATCCCCGGCGACTACTACATGACTGGC
TTCAGCGGTGAGGGGGCACC

Downstream 100 bases:

>100_bases
GTTCCACCAACCATATTGGTCCGCTCTCACCAGAGGCGGACCATTTTTTTTTTGAGATATCGAAATGACTACGATTCAAA
TCTCAGCCGTCGATGCTGAA

Product: putative DNA repair ATPase

Products: NA

Alternate protein names: ATPase; Nuclease SbcCD Subunit C

Number of amino acids: Translated: 774; Mature: 774

Protein sequence:

>774_residues
MRPLKLTLSGFRGILDGMHRDSVTVDLRELPTGLIAVMGPNGAGKTTIMDNLHPYPLMPSHASKMSADAFSYWDHLTGTR
AEKDLEWEHDGQQYRSQFAFRNSGKTRKAEYYLFVLGSDGVWQPVQLADGSLSDGKAETYNRCVESVLGSSEAFFTSVFS
AQNRRPIAGYQTSEIKKLLAELLGLERMRELSGKAMDVAKCLGRALDVVQHNITSLVGRRDRVARLSLEIEQAEASLVET
RQARDRELEANAQMVQERATLAAKQASSTVAEARMRELGQQKVAQEARRRTLDNDERAAVQRTEAQAKELGAVISSRRAI
LASSTAILAAATSRDALQLTVTQRQSEAIRLQEGIAQLEKVVPDQSRIIGELQNMAGQGESKAVLEKSLKGQADVIESVP
CRDNPMHSTCPLLAQARRASTDLTEVRISLAELRTGYRDKLKLKTALDEQLAPLAGQRASLRALQGQVAADQRELQRLTE
LAAQKPLLDDAQEALAKAERDLVELNAEAAARKERYQRDVVATDDQLATINREVTSLQSADVTGKIADFDRQVASSRERI
AQFEGRIEALIRTQTALSTERQGLLVDLEALPVVQRKAERISDEISSWKLLGKALGNDGVIALSIDDAGPEITKKVNDLL
LACYGPRFTIGIHTQTELANGDKREGFEIRVHDAQADSEKEFAVMSGGQKVWINECLTRGIALYRAQGAGTAFQTLFTDE
ADGPLDPERKREFMKMKREVLRQGGYEREFFISQTPDLVDEADAVIDVVALATQ

Sequences:

>Translated_774_residues
MRPLKLTLSGFRGILDGMHRDSVTVDLRELPTGLIAVMGPNGAGKTTIMDNLHPYPLMPSHASKMSADAFSYWDHLTGTR
AEKDLEWEHDGQQYRSQFAFRNSGKTRKAEYYLFVLGSDGVWQPVQLADGSLSDGKAETYNRCVESVLGSSEAFFTSVFS
AQNRRPIAGYQTSEIKKLLAELLGLERMRELSGKAMDVAKCLGRALDVVQHNITSLVGRRDRVARLSLEIEQAEASLVET
RQARDRELEANAQMVQERATLAAKQASSTVAEARMRELGQQKVAQEARRRTLDNDERAAVQRTEAQAKELGAVISSRRAI
LASSTAILAAATSRDALQLTVTQRQSEAIRLQEGIAQLEKVVPDQSRIIGELQNMAGQGESKAVLEKSLKGQADVIESVP
CRDNPMHSTCPLLAQARRASTDLTEVRISLAELRTGYRDKLKLKTALDEQLAPLAGQRASLRALQGQVAADQRELQRLTE
LAAQKPLLDDAQEALAKAERDLVELNAEAAARKERYQRDVVATDDQLATINREVTSLQSADVTGKIADFDRQVASSRERI
AQFEGRIEALIRTQTALSTERQGLLVDLEALPVVQRKAERISDEISSWKLLGKALGNDGVIALSIDDAGPEITKKVNDLL
LACYGPRFTIGIHTQTELANGDKREGFEIRVHDAQADSEKEFAVMSGGQKVWINECLTRGIALYRAQGAGTAFQTLFTDE
ADGPLDPERKREFMKMKREVLRQGGYEREFFISQTPDLVDEADAVIDVVALATQ
>Mature_774_residues
MRPLKLTLSGFRGILDGMHRDSVTVDLRELPTGLIAVMGPNGAGKTTIMDNLHPYPLMPSHASKMSADAFSYWDHLTGTR
AEKDLEWEHDGQQYRSQFAFRNSGKTRKAEYYLFVLGSDGVWQPVQLADGSLSDGKAETYNRCVESVLGSSEAFFTSVFS
AQNRRPIAGYQTSEIKKLLAELLGLERMRELSGKAMDVAKCLGRALDVVQHNITSLVGRRDRVARLSLEIEQAEASLVET
RQARDRELEANAQMVQERATLAAKQASSTVAEARMRELGQQKVAQEARRRTLDNDERAAVQRTEAQAKELGAVISSRRAI
LASSTAILAAATSRDALQLTVTQRQSEAIRLQEGIAQLEKVVPDQSRIIGELQNMAGQGESKAVLEKSLKGQADVIESVP
CRDNPMHSTCPLLAQARRASTDLTEVRISLAELRTGYRDKLKLKTALDEQLAPLAGQRASLRALQGQVAADQRELQRLTE
LAAQKPLLDDAQEALAKAERDLVELNAEAAARKERYQRDVVATDDQLATINREVTSLQSADVTGKIADFDRQVASSRERI
AQFEGRIEALIRTQTALSTERQGLLVDLEALPVVQRKAERISDEISSWKLLGKALGNDGVIALSIDDAGPEITKKVNDLL
LACYGPRFTIGIHTQTELANGDKREGFEIRVHDAQADSEKEFAVMSGGQKVWINECLTRGIALYRAQGAGTAFQTLFTDE
ADGPLDPERKREFMKMKREVLRQGGYEREFFISQTPDLVDEADAVIDVVALATQ

Specific function: Unknown

COG id: COG0419

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85409; Mature: 85409

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLKLTLSGFRGILDGMHRDSVTVDLRELPTGLIAVMGPNGAGKTTIMDNLHPYPLMPS
CCCEEEHHHHHHHHHCCCCCCCEEEEHHHCCCCEEEEECCCCCCCCEEECCCCCCCCCCC
HASKMSADAFSYWDHLTGTRAEKDLEWEHDGQQYRSQFAFRNSGKTRKAEYYLFVLGSDG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCC
VWQPVQLADGSLSDGKAETYNRCVESVLGSSEAFFTSVFSAQNRRPIAGYQTSEIKKLLA
CCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
ELLGLERMRELSGKAMDVAKCLGRALDVVQHNITSLVGRRDRVARLSLEIEQAEASLVET
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEHHHHHHHHHHH
RQARDRELEANAQMVQERATLAAKQASSTVAEARMRELGQQKVAQEARRRTLDNDERAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
QRTEAQAKELGAVISSRRAILASSTAILAAATSRDALQLTVTQRQSEAIRLQEGIAQLEK
HHHHHHHHHHHHHHHHCHHHHCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHH
VVPDQSRIIGELQNMAGQGESKAVLEKSLKGQADVIESVPCRDNPMHSTCPLLAQARRAS
HCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCC
TDLTEVRISLAELRTGYRDKLKLKTALDEQLAPLAGQRASLRALQGQVAADQRELQRLTE
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LAAQKPLLDDAQEALAKAERDLVELNAEAAARKERYQRDVVATDDQLATINREVTSLQSA
HHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
DVTGKIADFDRQVASSRERIAQFEGRIEALIRTQTALSTERQGLLVDLEALPVVQRKAER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH
ISDEISSWKLLGKALGNDGVIALSIDDAGPEITKKVNDLLLACYGPRFTIGIHTQTELAN
HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHEEEECCEEEEEEECHHHHCC
GDKREGFEIRVHDAQADSEKEFAVMSGGQKVWINECLTRGIALYRAQGAGTAFQTLFTDE
CCCCCCCEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHCCCC
ADGPLDPERKREFMKMKREVLRQGGYEREFFISQTPDLVDEADAVIDVVALATQ
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRPLKLTLSGFRGILDGMHRDSVTVDLRELPTGLIAVMGPNGAGKTTIMDNLHPYPLMPS
CCCEEEHHHHHHHHHCCCCCCCEEEEHHHCCCCEEEEECCCCCCCCEEECCCCCCCCCCC
HASKMSADAFSYWDHLTGTRAEKDLEWEHDGQQYRSQFAFRNSGKTRKAEYYLFVLGSDG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCC
VWQPVQLADGSLSDGKAETYNRCVESVLGSSEAFFTSVFSAQNRRPIAGYQTSEIKKLLA
CCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
ELLGLERMRELSGKAMDVAKCLGRALDVVQHNITSLVGRRDRVARLSLEIEQAEASLVET
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEHHHHHHHHHHH
RQARDRELEANAQMVQERATLAAKQASSTVAEARMRELGQQKVAQEARRRTLDNDERAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
QRTEAQAKELGAVISSRRAILASSTAILAAATSRDALQLTVTQRQSEAIRLQEGIAQLEK
HHHHHHHHHHHHHHHHCHHHHCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHH
VVPDQSRIIGELQNMAGQGESKAVLEKSLKGQADVIESVPCRDNPMHSTCPLLAQARRAS
HCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCC
TDLTEVRISLAELRTGYRDKLKLKTALDEQLAPLAGQRASLRALQGQVAADQRELQRLTE
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LAAQKPLLDDAQEALAKAERDLVELNAEAAARKERYQRDVVATDDQLATINREVTSLQSA
HHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
DVTGKIADFDRQVASSRERIAQFEGRIEALIRTQTALSTERQGLLVDLEALPVVQRKAER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH
ISDEISSWKLLGKALGNDGVIALSIDDAGPEITKKVNDLLLACYGPRFTIGIHTQTELAN
HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHEEEECCEEEEEEECHHHHCC
GDKREGFEIRVHDAQADSEKEFAVMSGGQKVWINECLTRGIALYRAQGAGTAFQTLFTDE
CCCCCCCEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHCCCC
ADGPLDPERKREFMKMKREVLRQGGYEREFFISQTPDLVDEADAVIDVVALATQ
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA