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The map label for this gene is 187928718

Identifier: 187928718

GI number: 187928718

Start: 1714633

End: 1716045

Strand: Direct

Name: 187928718

Synonym: Rpic_1635

Alternate gene names: NA

Gene position: 1714633-1716045 (Clockwise)

Preceding gene: 187928717

Following gene: 187928719

Centisome position: 43.49

GC content: 64.12

Gene sequence:

>1413_bases
ATGCCCAACGATGGCGAAAGCCTTCACGTGGGTCATTTTTCCGACCTGCACTATTCGACTGAGCGGTTGGTGGAAGCGGA
CCGATGCTTCGGTTTCGCCGTGGAAGATGCGGTCGCGCGTGGTTGCCATGTGGGTATCGTTTCCGGTGACGCAACCGATC
ATCGGCTCGACGCGCACACGCCGGCACTGCGGGTGCTTGCCGAGCGCATTCATGCGCTGTCGGGCCACATGCCGGTCCTC
ATGCTGCAGGGGACCTTCTCGCATGAGCCGCCGGGCACGCTGGACCTGTTCCGGCTGATCGGTAGCCGCCACCCCGTCTA
CGTCGCCGATCGCATTCACCAGGTTGCGCTCGTCGGATCGACGTTCCTGCCATCGGCCGGCCCGCTGTTCACCGTCGAAG
AGCTGGAAACGCTGCTGCAGGAGGGCACACCCTCTGCTGTGTTCACCTGCGTTCCGACCGTCAACAAGGCTGTGCTGGCG
GGCATCGTGGGCGCCATGGATGCGGCAACCGCGGTGGGCGAGCATCTGACGGTATTCCTGGGTGCCGCCGGCAAGGTGAA
TCGGCTGTTGCGGTCCAAAGGCATCCGAACCATCGGTGTGTCGCATGGAACGGTCAATGGCTGCTACACCGAGCACGGCG
TACCGATGGCCGGGTTCGACCATGAGTTCTCGCTCGGCGCGCTGTTCGAAGCCGAGTGCGATGCCTTCATGCTGGGACAT
ATCCATGCGATGCAGTTGTGGGAACGCGAAGGCCGGCTGGTCGGTTACGCCGGTTCCATCGGGTGCTTCCACTACGGCGA
AAAGGGCAAGAAGGGCTACCTGAGCTGGCAGATCAAGCCGGGCCGGGCCGAAGCGGTGCAGGTGGAAACGCCGGCGCGCG
AAACGGTCTGTGTCGATTTCGACGGCCCGCCGGATATGGAGCGCCTGGCCAACATCGCCGAGCAAACGCAGGACAAGTTC
GTGCGCGTTCGCTGGACCATTGACGAGGAGCATCGCCAGCTGGTCGACCGCGAGGCCATCCGCACGCTGTTCGCCGGCGC
CGCGGAGCTGAAGCTGGATCCGCGTGTGTTGCCTGCCGTCAGAAGCCGTGCGGAGGGCATCAGCCGCGCGGCGACTCTCG
GTGAGAAGGTTCAGCGTTGGTGCGGTTTGACCGACGTGAAGCCGGACGCGTTGCTGGAGCGCCTGTCCATCCTGGAGGCA
CTGGAGCCGCAAGACATCGCGGATCGAGTGGTCGCCTCGTTGGAGAGCGGGTCTGCTGCCGACAACGGTGAAACGGTGGC
GTCCGCCACGGCTGAGCCGGTGACAGTTCAGCCGGCCTGGCAGGACGCTGACCAAGTTCAGAACCAATCGTCGTTGGATT
GGCTGACCGATGACCTTTTCGCGGCAGATGCCGCCCAACCCTTGAACGTGTGA

Upstream 100 bases:

>100_bases
GTCGTAGCATCAACGTGCGGCGTCGAGAGTTCCCCCGACGCCGTTTTTCTTTTCTGTTGCTGTGACCGTTCTGGTTGCGG
CTATTCCATAGGAGGTGAGC

Downstream 100 bases:

>100_bases
GCCACGTTCCGACAGCCTTCGGGGCTGTCGAAACTCGGTTTTCCCCGCGTCTACGACGCATCGACCAGCAGTACCTATTC
CTTTGAACCCGGACGGGCGC

Product: DNA repair exonuclease-like protein

Products: NA

Alternate protein names: Nuclease SbcCD; DNA Exonuclease; Metallophosphoesterase

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MPNDGESLHVGHFSDLHYSTERLVEADRCFGFAVEDAVARGCHVGIVSGDATDHRLDAHTPALRVLAERIHALSGHMPVL
MLQGTFSHEPPGTLDLFRLIGSRHPVYVADRIHQVALVGSTFLPSAGPLFTVEELETLLQEGTPSAVFTCVPTVNKAVLA
GIVGAMDAATAVGEHLTVFLGAAGKVNRLLRSKGIRTIGVSHGTVNGCYTEHGVPMAGFDHEFSLGALFEAECDAFMLGH
IHAMQLWEREGRLVGYAGSIGCFHYGEKGKKGYLSWQIKPGRAEAVQVETPARETVCVDFDGPPDMERLANIAEQTQDKF
VRVRWTIDEEHRQLVDREAIRTLFAGAAELKLDPRVLPAVRSRAEGISRAATLGEKVQRWCGLTDVKPDALLERLSILEA
LEPQDIADRVVASLESGSAADNGETVASATAEPVTVQPAWQDADQVQNQSSLDWLTDDLFAADAAQPLNV

Sequences:

>Translated_470_residues
MPNDGESLHVGHFSDLHYSTERLVEADRCFGFAVEDAVARGCHVGIVSGDATDHRLDAHTPALRVLAERIHALSGHMPVL
MLQGTFSHEPPGTLDLFRLIGSRHPVYVADRIHQVALVGSTFLPSAGPLFTVEELETLLQEGTPSAVFTCVPTVNKAVLA
GIVGAMDAATAVGEHLTVFLGAAGKVNRLLRSKGIRTIGVSHGTVNGCYTEHGVPMAGFDHEFSLGALFEAECDAFMLGH
IHAMQLWEREGRLVGYAGSIGCFHYGEKGKKGYLSWQIKPGRAEAVQVETPARETVCVDFDGPPDMERLANIAEQTQDKF
VRVRWTIDEEHRQLVDREAIRTLFAGAAELKLDPRVLPAVRSRAEGISRAATLGEKVQRWCGLTDVKPDALLERLSILEA
LEPQDIADRVVASLESGSAADNGETVASATAEPVTVQPAWQDADQVQNQSSLDWLTDDLFAADAAQPLNV
>Mature_469_residues
PNDGESLHVGHFSDLHYSTERLVEADRCFGFAVEDAVARGCHVGIVSGDATDHRLDAHTPALRVLAERIHALSGHMPVLM
LQGTFSHEPPGTLDLFRLIGSRHPVYVADRIHQVALVGSTFLPSAGPLFTVEELETLLQEGTPSAVFTCVPTVNKAVLAG
IVGAMDAATAVGEHLTVFLGAAGKVNRLLRSKGIRTIGVSHGTVNGCYTEHGVPMAGFDHEFSLGALFEAECDAFMLGHI
HAMQLWEREGRLVGYAGSIGCFHYGEKGKKGYLSWQIKPGRAEAVQVETPARETVCVDFDGPPDMERLANIAEQTQDKFV
RVRWTIDEEHRQLVDREAIRTLFAGAAELKLDPRVLPAVRSRAEGISRAATLGEKVQRWCGLTDVKPDALLERLSILEAL
EPQDIADRVVASLESGSAADNGETVASATAEPVTVQPAWQDADQVQNQSSLDWLTDDLFAADAAQPLNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50843; Mature: 50712

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNDGESLHVGHFSDLHYSTERLVEADRCFGFAVEDAVARGCHVGIVSGDATDHRLDAHT
CCCCCCEEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEECCCCCCCCCCCC
PALRVLAERIHALSGHMPVLMLQGTFSHEPPGTLDLFRLIGSRHPVYVADRIHQVALVGS
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHEECC
TFLPSAGPLFTVEELETLLQEGTPSAVFTCVPTVNKAVLAGIVGAMDAATAVGEHLTVFL
CCCCCCCCEEEHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEE
GAAGKVNRLLRSKGIRTIGVSHGTVNGCYTEHGVPMAGFDHEFSLGALFEAECDAFMLGH
CCCHHHHHHHHHCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCEEHHHH
IHAMQLWEREGRLVGYAGSIGCFHYGEKGKKGYLSWQIKPGRAEAVQVETPARETVCVDF
HHHHHHHHHCCCEEEEECCCCEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEC
DGPPDMERLANIAEQTQDKFVRVRWTIDEEHRQLVDREAIRTLFAGAAELKLDPRVLPAV
CCCCCHHHHHHHHHHHHCCEEEEEEEECHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHH
RSRAEGISRAATLGEKVQRWCGLTDVKPDALLERLSILEALEPQDIADRVVASLESGSAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
DNGETVASATAEPVTVQPAWQDADQVQNQSSLDWLTDDLFAADAAQPLNV
CCCCCHHCCCCCCEEECCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PNDGESLHVGHFSDLHYSTERLVEADRCFGFAVEDAVARGCHVGIVSGDATDHRLDAHT
CCCCCEEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEECCCCCCCCCCCC
PALRVLAERIHALSGHMPVLMLQGTFSHEPPGTLDLFRLIGSRHPVYVADRIHQVALVGS
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHEECC
TFLPSAGPLFTVEELETLLQEGTPSAVFTCVPTVNKAVLAGIVGAMDAATAVGEHLTVFL
CCCCCCCCEEEHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEE
GAAGKVNRLLRSKGIRTIGVSHGTVNGCYTEHGVPMAGFDHEFSLGALFEAECDAFMLGH
CCCHHHHHHHHHCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCEEHHHH
IHAMQLWEREGRLVGYAGSIGCFHYGEKGKKGYLSWQIKPGRAEAVQVETPARETVCVDF
HHHHHHHHHCCCEEEEECCCCEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEC
DGPPDMERLANIAEQTQDKFVRVRWTIDEEHRQLVDREAIRTLFAGAAELKLDPRVLPAV
CCCCCHHHHHHHHHHHHCCEEEEEEEECHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHH
RSRAEGISRAATLGEKVQRWCGLTDVKPDALLERLSILEALEPQDIADRVVASLESGSAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
DNGETVASATAEPVTVQPAWQDADQVQNQSSLDWLTDDLFAADAAQPLNV
CCCCCHHCCCCCCEEECCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA