| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928711
Identifier: 187928711
GI number: 187928711
Start: 1709578
End: 1710309
Strand: Reverse
Name: 187928711
Synonym: Rpic_1628
Alternate gene names: NA
Gene position: 1710309-1709578 (Counterclockwise)
Preceding gene: 187928712
Following gene: 187928710
Centisome position: 43.38
GC content: 63.66
Gene sequence:
>732_bases ATGCACCTTGCATCCAGATACGCCGCCCTCATTCCGGTCGCCGCACTCTGCCTTGGCTTGGCCGCCTGCAGCGACAAGAC AACCGATACAGCCAAGCAGATCAACCGGGAGATCGAGACAACCAAGACCATCTCCGACCCGGTTTCTGCTCTGGCCAAGC TCGATCCGCTGCAGGGTAGTGGTCGAGATGCCCTGACTGGTTGCGAAGTCGTCTGTGGCGATATTGTGCAAGCCATGGCC AACCTGGACGACGCACGCACGGCGCGGATCAAGCAAGCGATGGACCGGCTCACGCCGGCAAAGCTGGCGGAATACTTCGA GGGCGACTCGATGCTGCCCCTACGCGACGACATGGCGCCCCGCATTCTCGCGGCGGCCCAGGCTTCCACGGGTACCGCAG TCAATAGTCGGCTCCTGCGTGTTGCTGGCCAGATCGTGCGCGATGGAAAATACGTGATTCGTAGCTCCGACAAGGCGGCA GAGTTGTTCGCGCGCGCCTGGTTGGCGGGCGACCCGACCGCAGCGGCGAACAACGCGCAGCTCTACGATTCGTTGCATGA CCTGAACAACGCCTACCTTTGGGCGTTACGCTGCCGAGCCGAGTGCCATCCTGATGACGGCTACCGCCCGGTCAACGCGG AATCGCTACGCAGCCGCCTATCCACGGCGGCGATCCGGCAGGCCGAACAGGCGGCACTCGACCCCACCGTGCTGTCTCTC GCTGGGCGCTAG
Upstream 100 bases:
>100_bases AAAATCACCGACGGCGTGATGGATCGACACGAGATGCCGCGCTTCCAGCTCTTTGGCTGTCTGACCAGCCGCACCAACAA ACCCAACTGACAGGTCGATC
Downstream 100 bases:
>100_bases GGGAACCACCATGCGCAAGATCTCGACCCTGACCGTTGCCCTCGTGCTTTTGAGCGCGGCACAGGTCGCAGACGCCGGCC GCGGTGGCGCTGGCGGTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MHLASRYAALIPVAALCLGLAACSDKTTDTAKQINREIETTKTISDPVSALAKLDPLQGSGRDALTGCEVVCGDIVQAMA NLDDARTARIKQAMDRLTPAKLAEYFEGDSMLPLRDDMAPRILAAAQASTGTAVNSRLLRVAGQIVRDGKYVIRSSDKAA ELFARAWLAGDPTAAANNAQLYDSLHDLNNAYLWALRCRAECHPDDGYRPVNAESLRSRLSTAAIRQAEQAALDPTVLSL AGR
Sequences:
>Translated_243_residues MHLASRYAALIPVAALCLGLAACSDKTTDTAKQINREIETTKTISDPVSALAKLDPLQGSGRDALTGCEVVCGDIVQAMA NLDDARTARIKQAMDRLTPAKLAEYFEGDSMLPLRDDMAPRILAAAQASTGTAVNSRLLRVAGQIVRDGKYVIRSSDKAA ELFARAWLAGDPTAAANNAQLYDSLHDLNNAYLWALRCRAECHPDDGYRPVNAESLRSRLSTAAIRQAEQAALDPTVLSL AGR >Mature_243_residues MHLASRYAALIPVAALCLGLAACSDKTTDTAKQINREIETTKTISDPVSALAKLDPLQGSGRDALTGCEVVCGDIVQAMA NLDDARTARIKQAMDRLTPAKLAEYFEGDSMLPLRDDMAPRILAAAQASTGTAVNSRLLRVAGQIVRDGKYVIRSSDKAA ELFARAWLAGDPTAAANNAQLYDSLHDLNNAYLWALRCRAECHPDDGYRPVNAESLRSRLSTAAIRQAEQAALDPTVLSL AGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26038; Mature: 26038
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLASRYAALIPVAALCLGLAACSDKTTDTAKQINREIETTKTISDPVSALAKLDPLQGS CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GRDALTGCEVVCGDIVQAMANLDDARTARIKQAMDRLTPAKLAEYFEGDSMLPLRDDMAP CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHH RILAAAQASTGTAVNSRLLRVAGQIVRDGKYVIRSSDKAAELFARAWLAGDPTAAANNAQ HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCHH LYDSLHDLNNAYLWALRCRAECHPDDGYRPVNAESLRSRLSTAAIRQAEQAALDPTVLSL HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH AGR CCC >Mature Secondary Structure MHLASRYAALIPVAALCLGLAACSDKTTDTAKQINREIETTKTISDPVSALAKLDPLQGS CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GRDALTGCEVVCGDIVQAMANLDDARTARIKQAMDRLTPAKLAEYFEGDSMLPLRDDMAP CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHH RILAAAQASTGTAVNSRLLRVAGQIVRDGKYVIRSSDKAAELFARAWLAGDPTAAANNAQ HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCHH LYDSLHDLNNAYLWALRCRAECHPDDGYRPVNAESLRSRLSTAAIRQAEQAALDPTVLSL HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH AGR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA