| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928687
Identifier: 187928687
GI number: 187928687
Start: 1693429
End: 1694124
Strand: Direct
Name: 187928687
Synonym: Rpic_1604
Alternate gene names: NA
Gene position: 1693429-1694124 (Clockwise)
Preceding gene: 187928686
Following gene: 187928688
Centisome position: 42.95
GC content: 59.34
Gene sequence:
>696_bases GTGCCTCTGGTGCGTGTTCCTTTGCATCGAATATCCTGCCTTCTTATCTCGCGCTTCTCGCGCATCGATTCCGCGCCACA CGGTGCTACCAACAGGCCTTGCCACGTTCTTCGGGGCATCTTGGCTTTCATCCCACCGGGAACTCATTCCCGGTGCGGGC ATGGGTTGCCTCGCATTGACGCCGAGATAGAGCGCACCAACGCGGAGCTGGATGCGCACATTGCCCAGTCCACGGCTTCC GCCGAGCAGAGCGCGGATCTGCTCGCCCTGCTTGGGCAGGTGAAAGCCAAGAAGGTGCCGTTGCCCGCCCAGGCAGAGGC ACAGATCAGGAAGATTGCCGATGTTGCTCGCGAGAGGACAGCATTGAATTCTCGTCGTCAGCAGACCAGTTCAATGCCTT CCAGACAGCAGTTCGTCGGAAGCGACAAGCTGTCCAGCGACAGCGATGATTTTGATCTCTGGCTGTACATGGCGACAGAT GTTCCGACCAGCCTGAGAACGCTGCTACTCAGTGCGCTCAACTCGTATCATCATGGCATGCCGACTGATTCACATGGACA ATTCTCGGGCGCTGGGACGTCCGGGAACTGGGGCGATGACGCTCCGGATCAGAGAGCCTCGGATGCTGCTGCAGCTGCCA TGGGGCTCGAAGCGCTGGCTATCTCGACAGATGACAGTCTCGGGCGCTACTCCTGA
Upstream 100 bases:
>100_bases CCTCCGAAGGATGGCCTTTTTTCTTTCTGAGCGGCATTGAGAGTCGACCGGGATGTTGTGCTGCAGCCGCTGCGCGAGGT TGCCTAGGAGTGCGCAGAAC
Downstream 100 bases:
>100_bases CACGTTCGAAATCTTGAGCAAGCGGGGACGCGAGATGATCGAAGAGGCGAAGAGCGAGAACGCACCGAGCTTCTTCCTGC CGCCTGGGGGGAGCAGCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MPLVRVPLHRISCLLISRFSRIDSAPHGATNRPCHVLRGILAFIPPGTHSRCGHGLPRIDAEIERTNAELDAHIAQSTAS AEQSADLLALLGQVKAKKVPLPAQAEAQIRKIADVARERTALNSRRQQTSSMPSRQQFVGSDKLSSDSDDFDLWLYMATD VPTSLRTLLLSALNSYHHGMPTDSHGQFSGAGTSGNWGDDAPDQRASDAAAAAMGLEALAISTDDSLGRYS
Sequences:
>Translated_231_residues MPLVRVPLHRISCLLISRFSRIDSAPHGATNRPCHVLRGILAFIPPGTHSRCGHGLPRIDAEIERTNAELDAHIAQSTAS AEQSADLLALLGQVKAKKVPLPAQAEAQIRKIADVARERTALNSRRQQTSSMPSRQQFVGSDKLSSDSDDFDLWLYMATD VPTSLRTLLLSALNSYHHGMPTDSHGQFSGAGTSGNWGDDAPDQRASDAAAAAMGLEALAISTDDSLGRYS >Mature_230_residues PLVRVPLHRISCLLISRFSRIDSAPHGATNRPCHVLRGILAFIPPGTHSRCGHGLPRIDAEIERTNAELDAHIAQSTASA EQSADLLALLGQVKAKKVPLPAQAEAQIRKIADVARERTALNSRRQQTSSMPSRQQFVGSDKLSSDSDDFDLWLYMATDV PTSLRTLLLSALNSYHHGMPTDSHGQFSGAGTSGNWGDDAPDQRASDAAAAAMGLEALAISTDDSLGRYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24818; Mature: 24687
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVRVPLHRISCLLISRFSRIDSAPHGATNRPCHVLRGILAFIPPGTHSRCGHGLPRID CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCC AEIERTNAELDAHIAQSTASAEQSADLLALLGQVKAKKVPLPAQAEAQIRKIADVARERT HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ALNSRRQQTSSMPSRQQFVGSDKLSSDSDDFDLWLYMATDVPTSLRTLLLSALNSYHHGM HHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC PTDSHGQFSGAGTSGNWGDDAPDQRASDAAAAAMGLEALAISTDDSLGRYS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCC >Mature Secondary Structure PLVRVPLHRISCLLISRFSRIDSAPHGATNRPCHVLRGILAFIPPGTHSRCGHGLPRID CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCC AEIERTNAELDAHIAQSTASAEQSADLLALLGQVKAKKVPLPAQAEAQIRKIADVARERT HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ALNSRRQQTSSMPSRQQFVGSDKLSSDSDDFDLWLYMATDVPTSLRTLLLSALNSYHHGM HHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC PTDSHGQFSGAGTSGNWGDDAPDQRASDAAAAAMGLEALAISTDDSLGRYS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA