| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928684
Identifier: 187928684
GI number: 187928684
Start: 1691152
End: 1691874
Strand: Direct
Name: 187928684
Synonym: Rpic_1601
Alternate gene names: NA
Gene position: 1691152-1691874 (Clockwise)
Preceding gene: 187928683
Following gene: 187928685
Centisome position: 42.89
GC content: 59.89
Gene sequence:
>723_bases ATGGCCAAGATCTTGACCGCCAGTCGGTCTCATGACGTGGCCCTGCAAGGGGCCATTTTGCTGTATGGGCCGGCCGAGGG GCAGTTCACATACTCGACGGCACACCGCATCACTCACGAGGCGGGGACTCGAAAGCCTGCAATCGGCCCGGGTGTTCCGC TCAATCGGCGAGCACTCATTCACGCTGTGACCCAGGTTGCTTTGTCAGCGTTGCCGAAGGGCGAGTTCCTGACGCCGAAC GTACTGTCCGTGAGCACGCGCGCCGTAACGTGGTGGTGCCCGCCGGCGATTCGCCGGGTGTTCTTTCAATGCAAAGAATT GGGTACGCGCAGTGCGGTAGTGCCGCACCCGGGCTTGGTGTTCCAGGCGGCCAATGACGGGTTCAGCGTGTTTGCCTTGA TGGAGGACGTCAGGCCGACGCCGGAATCCATGCTGCACGAGCCGCCGTACTTCAATACGTGGGACGTGGGAAGGATTTGC ATCGGCTCTGCGCAGGTTCCGAAGCAGATCGATGTCGCTTCGATTGCCGGTTGGGAAGAAGCCTTCTTCTCGTCGGCCTT CACGCATCCAAACCGCGGCGCCCAACGCGTCAAGTTCGAAAGAGGTGTGTACGCCTTCTGGAAGGAGATGCTCGATGGCA ACTTTGCCGAGTACCCGAAGGAAGTGCTCATTCCGTTGAAGAAATCGCTCGGTGATCTCATCGCCGGCAAAGTTGGAGGT TGA
Upstream 100 bases:
>100_bases CGCAACAGGTGCCCAAGCAGTATGAGGACCTGTCGCGCATGTTCGAGATCGTAAAGGCTCTCGACCAATTACTGACCATC ATTTCACGATAGGAGGCCCC
Downstream 100 bases:
>100_bases AATGCATCCGATGGACATGACGCTGCAAGCGTCTTTCCCGACGATCATGGTGCCGAAATTCGGTAGCCTGACACCATTGT CTGGTAGTGGTGAACGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MAKILTASRSHDVALQGAILLYGPAEGQFTYSTAHRITHEAGTRKPAIGPGVPLNRRALIHAVTQVALSALPKGEFLTPN VLSVSTRAVTWWCPPAIRRVFFQCKELGTRSAVVPHPGLVFQAANDGFSVFALMEDVRPTPESMLHEPPYFNTWDVGRIC IGSAQVPKQIDVASIAGWEEAFFSSAFTHPNRGAQRVKFERGVYAFWKEMLDGNFAEYPKEVLIPLKKSLGDLIAGKVGG
Sequences:
>Translated_240_residues MAKILTASRSHDVALQGAILLYGPAEGQFTYSTAHRITHEAGTRKPAIGPGVPLNRRALIHAVTQVALSALPKGEFLTPN VLSVSTRAVTWWCPPAIRRVFFQCKELGTRSAVVPHPGLVFQAANDGFSVFALMEDVRPTPESMLHEPPYFNTWDVGRIC IGSAQVPKQIDVASIAGWEEAFFSSAFTHPNRGAQRVKFERGVYAFWKEMLDGNFAEYPKEVLIPLKKSLGDLIAGKVGG >Mature_239_residues AKILTASRSHDVALQGAILLYGPAEGQFTYSTAHRITHEAGTRKPAIGPGVPLNRRALIHAVTQVALSALPKGEFLTPNV LSVSTRAVTWWCPPAIRRVFFQCKELGTRSAVVPHPGLVFQAANDGFSVFALMEDVRPTPESMLHEPPYFNTWDVGRICI GSAQVPKQIDVASIAGWEEAFFSSAFTHPNRGAQRVKFERGVYAFWKEMLDGNFAEYPKEVLIPLKKSLGDLIAGKVGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26242; Mature: 26111
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKILTASRSHDVALQGAILLYGPAEGQFTYSTAHRITHEAGTRKPAIGPGVPLNRRALI CCCEECCCCCCCEEEECEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCHHHHH HAVTQVALSALPKGEFLTPNVLSVSTRAVTWWCPPAIRRVFFQCKELGTRSAVVPHPGLV HHHHHHHHHHCCCCCCCCCCCEEECCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEE FQAANDGFSVFALMEDVRPTPESMLHEPPYFNTWDVGRICIGSAQVPKQIDVASIAGWEE EEECCCCEEEEEEHHHCCCCHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCHHH AFFSSAFTHPNRGAQRVKFERGVYAFWKEMLDGNFAEYPKEVLIPLKKSLGDLIAGKVGG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AKILTASRSHDVALQGAILLYGPAEGQFTYSTAHRITHEAGTRKPAIGPGVPLNRRALI CCEECCCCCCCEEEECEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCHHHHH HAVTQVALSALPKGEFLTPNVLSVSTRAVTWWCPPAIRRVFFQCKELGTRSAVVPHPGLV HHHHHHHHHHCCCCCCCCCCCEEECCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEE FQAANDGFSVFALMEDVRPTPESMLHEPPYFNTWDVGRICIGSAQVPKQIDVASIAGWEE EEECCCCEEEEEEHHHCCCCHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCHHH AFFSSAFTHPNRGAQRVKFERGVYAFWKEMLDGNFAEYPKEVLIPLKKSLGDLIAGKVGG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA