| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928678
Identifier: 187928678
GI number: 187928678
Start: 1686286
End: 1687218
Strand: Direct
Name: 187928678
Synonym: Rpic_1595
Alternate gene names: NA
Gene position: 1686286-1687218 (Clockwise)
Preceding gene: 187928677
Following gene: 187928679
Centisome position: 42.77
GC content: 58.95
Gene sequence:
>933_bases ATGAGCAGGGCAGCACAACGCCGGCACCTGGAGACCGCCGACGAACACCAAAAGGCCTTGGTCGATTTGATCAAGGCCTT CGGGTACCGTCACCGCGCAAGCGATGTGTTCTCCGACTTCGTTGAGATGTCCGCACTGAGCCTCAGCAATGCGGTCGATC TCGCTCAGCGAGACGGCCGAGAGGCTCGGTACATGGAGATCGTCAAGAAGTACACCAAAGAAGAAGTGGACCAGTTCCCG AAGATGCTTGGCCACCTCGTGCTCACTTACGAGCGCCGGATGACTGATGTCCTTCCCGGGTCGCCGGCGCCGGTCAGAGT CGCCGGTGGCTTTGGCGATGTGCTTGGTCACACCTACATGCTGCTTGAGCTGGGCAACGATAGGGCGGGGCAGTTTTTCA CGCCCTATTCGGTATCCAGCATGATGGCTGCGATGCAGGTCAATGACCATGATCCGGACGTCGCGGAACATGGCTTCATC ACCGTGATGGAGCCAACCTGCGGCGCTGGTGGCATGGTGATCGCAATGGCGGAGGCTATGCATCAGGCGGGCCACAACTA CCAGACGGCCATGCATGCAACGTGCATCGATATCGATCCACGGTGCGTACACATGACGTATGTGCAGCTGGCCTTGCTCC ATATCCCTGCGGTTGTCATCCTTGGCAACTCATTGATGCTTGAGGAGCGCGAGGTTTGGTACACACCAGCGCACGTGCTT GGCGGGTGGAACCGGAAACTGGCTGCGCGTGAGCGTAGCCAGGAAACCTCCCCGCCCGTTGATTCCGAACGCAATTTCGT GCCCGCAGAAATGGGTACGGTCCTGTCGATTCTGGAGGCGATTGAACCGCCGCAAGCGCCGGCCATCATTGAAGCGGTGC CGCAACAGCACGCTGAAATTGCCCGGCAACGTGAGCAATTGTCGTTGTTCTAG
Upstream 100 bases:
>100_bases CCGACATCAAAGCCGCTCTGGCTATTGGCGCGGTCCCCGACATGGATGCCTTTTGCGCATCGCTGAACCAGCGCTTCAAT GTGCGAGTTGGGGCTCTGCA
Downstream 100 bases:
>100_bases GTTGGCCACTGGCCGGCCTCGCGCAAGAGCGGGTCCCCATCTGCGGAGGGGGATCCGCTGTCTGGCACCGCAGACGTGTT TCCGGTATTCTCAAAGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSRAAQRRHLETADEHQKALVDLIKAFGYRHRASDVFSDFVEMSALSLSNAVDLAQRDGREARYMEIVKKYTKEEVDQFP KMLGHLVLTYERRMTDVLPGSPAPVRVAGGFGDVLGHTYMLLELGNDRAGQFFTPYSVSSMMAAMQVNDHDPDVAEHGFI TVMEPTCGAGGMVIAMAEAMHQAGHNYQTAMHATCIDIDPRCVHMTYVQLALLHIPAVVILGNSLMLEEREVWYTPAHVL GGWNRKLAARERSQETSPPVDSERNFVPAEMGTVLSILEAIEPPQAPAIIEAVPQQHAEIARQREQLSLF
Sequences:
>Translated_310_residues MSRAAQRRHLETADEHQKALVDLIKAFGYRHRASDVFSDFVEMSALSLSNAVDLAQRDGREARYMEIVKKYTKEEVDQFP KMLGHLVLTYERRMTDVLPGSPAPVRVAGGFGDVLGHTYMLLELGNDRAGQFFTPYSVSSMMAAMQVNDHDPDVAEHGFI TVMEPTCGAGGMVIAMAEAMHQAGHNYQTAMHATCIDIDPRCVHMTYVQLALLHIPAVVILGNSLMLEEREVWYTPAHVL GGWNRKLAARERSQETSPPVDSERNFVPAEMGTVLSILEAIEPPQAPAIIEAVPQQHAEIARQREQLSLF >Mature_309_residues SRAAQRRHLETADEHQKALVDLIKAFGYRHRASDVFSDFVEMSALSLSNAVDLAQRDGREARYMEIVKKYTKEEVDQFPK MLGHLVLTYERRMTDVLPGSPAPVRVAGGFGDVLGHTYMLLELGNDRAGQFFTPYSVSSMMAAMQVNDHDPDVAEHGFIT VMEPTCGAGGMVIAMAEAMHQAGHNYQTAMHATCIDIDPRCVHMTYVQLALLHIPAVVILGNSLMLEEREVWYTPAHVLG GWNRKLAARERSQETSPPVDSERNFVPAEMGTVLSILEAIEPPQAPAIIEAVPQQHAEIARQREQLSLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34495; Mature: 34364
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAAQRRHLETADEHQKALVDLIKAFGYRHRASDVFSDFVEMSALSLSNAVDLAQRDGR CCCHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EARYMEIVKKYTKEEVDQFPKMLGHLVLTYERRMTDVLPGSPAPVRVAGGFGDVLGHTYM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHEEE LLELGNDRAGQFFTPYSVSSMMAAMQVNDHDPDVAEHGFITVMEPTCGAGGMVIAMAEAM EEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCCCCHHHHHHHHH HQAGHNYQTAMHATCIDIDPRCVHMTYVQLALLHIPAVVILGNSLMLEEREVWYTPAHVL HHCCCCHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHEECHHHHH GGWNRKLAARERSQETSPPVDSERNFVPAEMGTVLSILEAIEPPQAPAIIEAVPQQHAEI CCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH ARQREQLSLF HHHHHHHCCC >Mature Secondary Structure SRAAQRRHLETADEHQKALVDLIKAFGYRHRASDVFSDFVEMSALSLSNAVDLAQRDGR CCHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EARYMEIVKKYTKEEVDQFPKMLGHLVLTYERRMTDVLPGSPAPVRVAGGFGDVLGHTYM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHEEE LLELGNDRAGQFFTPYSVSSMMAAMQVNDHDPDVAEHGFITVMEPTCGAGGMVIAMAEAM EEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCCCCHHHHHHHHH HQAGHNYQTAMHATCIDIDPRCVHMTYVQLALLHIPAVVILGNSLMLEEREVWYTPAHVL HHCCCCHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHEECHHHHH GGWNRKLAARERSQETSPPVDSERNFVPAEMGTVLSILEAIEPPQAPAIIEAVPQQHAEI CCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH ARQREQLSLF HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA