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The map label for this gene is ydaO [H]

Identifier: 187928676

GI number: 187928676

Start: 1682926

End: 1684899

Strand: Direct

Name: ydaO [H]

Synonym: Rpic_1593

Alternate gene names: 187928676

Gene position: 1682926-1684899 (Clockwise)

Preceding gene: 187928674

Following gene: 187928677

Centisome position: 42.69

GC content: 64.34

Gene sequence:

>1974_bases
ATGGCAAGCATGACCAAGATGTGGCAACTGCTGGTGGGTAAGCCCCTGGACCCGCTGGACCCGCGCACACGCCATGCCAT
TGCGGTGACGCCGTTGCTGGCGTGGGTCGGGCTGGGGGCGGATGGGTTGTCTTCCTCCTGCTACGGCCCGGAAGAAGCCT
TTCTGGCGCTGGGCCAGCACACGCCGCTCGCGCTGTTTCTCGCGCTGGCCACGGCTGCCACGGTGTTCATCATCGCGCTG
GGCTACAACCAGGTGATCGAGCTGTTCCCGACCGGCGGGGGTGGCTACCGGGTGGCCACGGCACTACTCGGGCCGCGCCC
CGGGTTGGTGTCGGGGGCGGCGCTGCTGGTGGACTACGTGTTGACCGTCGCCACCTCGTTGGCAAGCGGCGTGGACGCGT
TCTTCAGCCTGCTGCCCGTGAGCGCGCAAGCGTTCAAGCTGGGCACCGAAATCGTGTTGGTCGTGTTGATGACCGGGCTC
AACTTCCGGGGCATGCGGGAATCCATCCTGGTGTTGCTGCCGATCTTCATCGGCTTTGTGGTGCTGCATCTCGGGTTGAT
CGTCTATGGCGTGGCCGTGCACGGCGACCACTTGGTGACGGTAGTGCCGGACGCAGTCAGCGAGGCGCATGGCATGTCAC
AGGCGCTTGGGCCGCTGGTGATGCTCGGCTTGCTGATGCGCGCGTTCTCGATGGGCGGCGGTACCTATACCGGCCTGGAA
GCCGTCTCGAACAACGTCAACATGCTGGCCGAGCCGCGCGTGCCTGCCGGCAAGCGCACCATGTTGTACATGGCGACGTC
GCTGGCCTTTACGGCGGGCGGCATCATCCTGCTGTACATGCTGTGGCAGGCCAAGCCAGTGGAAGGCCAGACGCTTAACG
CGGTGGTGTTCGGCAGCGTGATCGACCACATGGGGCTCGACTCAGCGCTTGCGCGCAGTGTGCTGCTGGCAGCCGTGCTG
GCGTTCGAGGCGGGCCTGTTGCTGGTGGGCGCGCAGACGGGTTTTCTGGATGGCCCTGCGGTGCTGTCGAACATGGCGCA
AGACTCCTGGGTGCCGCGGCATTTCCGCGATCTGTCGACGCGGCTGGTGCGGCAGAACGGCATCATCGTGATGGGCGTGG
CCAGCGTCATCATCTTGCTGTGGACGCACGGCGAGGTGGCGGTGCTGGTGGTGCTGTACAGCATCAACGTGTTTCTGACG
TTCAGCCTGTCACTGCTGGGCCTGTGTACGTACTGGTGGCGCCGCCGCAAGGACAGTGGCAACTGGCTCAAGCACTTCGC
ACTGTCCGCCCTGGGCCTGTCGGTCACCAGCACGGTGCTGGTTATCACGCTGGTCGAGAAATTCACGGCGGGCGGCTGGT
TGACAGTGCTGGTCACCAGCGCGGTCGTGGCGCTGTGCGTCCTGATCCGGCGGCACTATGACGAAACCCGCGCACAGATC
GCCAAGGAAGATGCGTTGTTTGGCGGAGCCCCCCCTGCGGTGGACGAAAGCAGCGCCCCGGCCAAACCAGACCCTTCACA
GCCGACTGCCATTCTGCTGGTCGGCAAGCATCTTGGGGCGAGCATGCATGCGCTGCTGTGGGTGAACCGGCTGTTTCCCG
GCCACTTCAAGAACGTGATCTTCCTGGCCGTGGGCGAGGTGGACGCACAGAGCTATGAAGGCGCTGAACATCTGGACCAC
CTGCGCCAGACCATCAGCGCATCGTTGGCGTACTACGTGGCGCACTGCCGGCGCCACGGCATGGCGGCGGACTACCGCAT
CGCCTTCGGCACGCACCCGATTGCGGAATTCACGCGCCTGGCCGAAACCACGATGGACGCCTTCCCGAACAGCGTGTGCT
TTGCCAGCAAGCTCATCTTCAAACAGGTCAATTTCCTGACCGCCTGGTTGCACAACCAGACGCCGCTTGAGATCCAGACG
CGCCTACACGTGCAGGGCAAACAGATGGTGTTGTTGCCGATGAACGTGGGGTAG

Upstream 100 bases:

>100_bases
CGCCTTGGCAGGCATCGGTGGCATTTGTGCGGACGCTGCTCTAGATTGAGCAGTACAGCCAACTTGGCCCCCATAAGACC
ACTCGCTGCACGGAGACGCC

Downstream 100 bases:

>100_bases
CGCGGGAGATTGCTCACGCATTATTGAAACTGGGCGCACACCCGGCGTCCTGGCTCCTGTCATTTCTTGACGTTGCTTCC
GCGGCATGTAAAGTGCTCCG

Product: amino acid transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 656

Protein sequence:

>657_residues
MASMTKMWQLLVGKPLDPLDPRTRHAIAVTPLLAWVGLGADGLSSSCYGPEEAFLALGQHTPLALFLALATAATVFIIAL
GYNQVIELFPTGGGGYRVATALLGPRPGLVSGAALLVDYVLTVATSLASGVDAFFSLLPVSAQAFKLGTEIVLVVLMTGL
NFRGMRESILVLLPIFIGFVVLHLGLIVYGVAVHGDHLVTVVPDAVSEAHGMSQALGPLVMLGLLMRAFSMGGGTYTGLE
AVSNNVNMLAEPRVPAGKRTMLYMATSLAFTAGGIILLYMLWQAKPVEGQTLNAVVFGSVIDHMGLDSALARSVLLAAVL
AFEAGLLLVGAQTGFLDGPAVLSNMAQDSWVPRHFRDLSTRLVRQNGIIVMGVASVIILLWTHGEVAVLVVLYSINVFLT
FSLSLLGLCTYWWRRRKDSGNWLKHFALSALGLSVTSTVLVITLVEKFTAGGWLTVLVTSAVVALCVLIRRHYDETRAQI
AKEDALFGGAPPAVDESSAPAKPDPSQPTAILLVGKHLGASMHALLWVNRLFPGHFKNVIFLAVGEVDAQSYEGAEHLDH
LRQTISASLAYYVAHCRRHGMAADYRIAFGTHPIAEFTRLAETTMDAFPNSVCFASKLIFKQVNFLTAWLHNQTPLEIQT
RLHVQGKQMVLLPMNVG

Sequences:

>Translated_657_residues
MASMTKMWQLLVGKPLDPLDPRTRHAIAVTPLLAWVGLGADGLSSSCYGPEEAFLALGQHTPLALFLALATAATVFIIAL
GYNQVIELFPTGGGGYRVATALLGPRPGLVSGAALLVDYVLTVATSLASGVDAFFSLLPVSAQAFKLGTEIVLVVLMTGL
NFRGMRESILVLLPIFIGFVVLHLGLIVYGVAVHGDHLVTVVPDAVSEAHGMSQALGPLVMLGLLMRAFSMGGGTYTGLE
AVSNNVNMLAEPRVPAGKRTMLYMATSLAFTAGGIILLYMLWQAKPVEGQTLNAVVFGSVIDHMGLDSALARSVLLAAVL
AFEAGLLLVGAQTGFLDGPAVLSNMAQDSWVPRHFRDLSTRLVRQNGIIVMGVASVIILLWTHGEVAVLVVLYSINVFLT
FSLSLLGLCTYWWRRRKDSGNWLKHFALSALGLSVTSTVLVITLVEKFTAGGWLTVLVTSAVVALCVLIRRHYDETRAQI
AKEDALFGGAPPAVDESSAPAKPDPSQPTAILLVGKHLGASMHALLWVNRLFPGHFKNVIFLAVGEVDAQSYEGAEHLDH
LRQTISASLAYYVAHCRRHGMAADYRIAFGTHPIAEFTRLAETTMDAFPNSVCFASKLIFKQVNFLTAWLHNQTPLEIQT
RLHVQGKQMVLLPMNVG
>Mature_656_residues
ASMTKMWQLLVGKPLDPLDPRTRHAIAVTPLLAWVGLGADGLSSSCYGPEEAFLALGQHTPLALFLALATAATVFIIALG
YNQVIELFPTGGGGYRVATALLGPRPGLVSGAALLVDYVLTVATSLASGVDAFFSLLPVSAQAFKLGTEIVLVVLMTGLN
FRGMRESILVLLPIFIGFVVLHLGLIVYGVAVHGDHLVTVVPDAVSEAHGMSQALGPLVMLGLLMRAFSMGGGTYTGLEA
VSNNVNMLAEPRVPAGKRTMLYMATSLAFTAGGIILLYMLWQAKPVEGQTLNAVVFGSVIDHMGLDSALARSVLLAAVLA
FEAGLLLVGAQTGFLDGPAVLSNMAQDSWVPRHFRDLSTRLVRQNGIIVMGVASVIILLWTHGEVAVLVVLYSINVFLTF
SLSLLGLCTYWWRRRKDSGNWLKHFALSALGLSVTSTVLVITLVEKFTAGGWLTVLVTSAVVALCVLIRRHYDETRAQIA
KEDALFGGAPPAVDESSAPAKPDPSQPTAILLVGKHLGASMHALLWVNRLFPGHFKNVIFLAVGEVDAQSYEGAEHLDHL
RQTISASLAYYVAHCRRHGMAADYRIAFGTHPIAEFTRLAETTMDAFPNSVCFASKLIFKQVNFLTAWLHNQTPLEIQTR
LHVQGKQMVLLPMNVG

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70505; Mature: 70374

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASMTKMWQLLVGKPLDPLDPRTRHAIAVTPLLAWVGLGADGLSSSCYGPEEAFLALGQH
CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCC
TPLALFLALATAATVFIIALGYNQVIELFPTGGGGYRVATALLGPRPGLVSGAALLVDYV
CHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHH
LTVATSLASGVDAFFSLLPVSAQAFKLGTEIVLVVLMTGLNFRGMRESILVLLPIFIGFV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VLHLGLIVYGVAVHGDHLVTVVPDAVSEAHGMSQALGPLVMLGLLMRAFSMGGGTYTGLE
HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AVSNNVNMLAEPRVPAGKRTMLYMATSLAFTAGGIILLYMLWQAKPVEGQTLNAVVFGSV
HHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
IDHMGLDSALARSVLLAAVLAFEAGLLLVGAQTGFLDGPAVLSNMAQDSWVPRHFRDLST
HHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
RLVRQNGIIVMGVASVIILLWTHGEVAVLVVLYSINVFLTFSLSLLGLCTYWWRRRKDSG
HHHHCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NWLKHFALSALGLSVTSTVLVITLVEKFTAGGWLTVLVTSAVVALCVLIRRHYDETRAQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKEDALFGGAPPAVDESSAPAKPDPSQPTAILLVGKHLGASMHALLWVNRLFPGHFKNVI
HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEE
FLAVGEVDAQSYEGAEHLDHLRQTISASLAYYVAHCRRHGMAADYRIAFGTHPIAEFTRL
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
AETTMDAFPNSVCFASKLIFKQVNFLTAWLHNQTPLEIQTRLHVQGKQMVLLPMNVG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEECCCC
>Mature Secondary Structure 
ASMTKMWQLLVGKPLDPLDPRTRHAIAVTPLLAWVGLGADGLSSSCYGPEEAFLALGQH
CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCC
TPLALFLALATAATVFIIALGYNQVIELFPTGGGGYRVATALLGPRPGLVSGAALLVDYV
CHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHH
LTVATSLASGVDAFFSLLPVSAQAFKLGTEIVLVVLMTGLNFRGMRESILVLLPIFIGFV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VLHLGLIVYGVAVHGDHLVTVVPDAVSEAHGMSQALGPLVMLGLLMRAFSMGGGTYTGLE
HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AVSNNVNMLAEPRVPAGKRTMLYMATSLAFTAGGIILLYMLWQAKPVEGQTLNAVVFGSV
HHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
IDHMGLDSALARSVLLAAVLAFEAGLLLVGAQTGFLDGPAVLSNMAQDSWVPRHFRDLST
HHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
RLVRQNGIIVMGVASVIILLWTHGEVAVLVVLYSINVFLTFSLSLLGLCTYWWRRRKDSG
HHHHCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NWLKHFALSALGLSVTSTVLVITLVEKFTAGGWLTVLVTSAVVALCVLIRRHYDETRAQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKEDALFGGAPPAVDESSAPAKPDPSQPTAILLVGKHLGASMHALLWVNRLFPGHFKNVI
HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEE
FLAVGEVDAQSYEGAEHLDHLRQTISASLAYYVAHCRRHGMAADYRIAFGTHPIAEFTRL
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
AETTMDAFPNSVCFASKLIFKQVNFLTAWLHNQTPLEIQTRLHVQGKQMVLLPMNVG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]