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The map label for this gene is 187928664

Identifier: 187928664

GI number: 187928664

Start: 1669589

End: 1671511

Strand: Reverse

Name: 187928664

Synonym: Rpic_1580

Alternate gene names: NA

Gene position: 1671511-1669589 (Counterclockwise)

Preceding gene: 187928665

Following gene: 187928663

Centisome position: 42.4

GC content: 58.09

Gene sequence:

>1923_bases
ATGGCAAGCAAGCCGTTAGCAAAGACGCCGACCCTTCTATCGATTAAGAAGGGGGGCAGCTACAGCCACGATGGGCGTAC
ATACGCGATTCTCCACTACGCTGGCTTGGACAGCGTTATCGCGCGCGAGGATGCATCAGGAGCGATGGTTATCCTCAACG
TGGGGTCGCTCAAGGCACCGTTTAAGGGCCTTGAGGGCTTCCCGGAGCCCAGAGAGCATATCGACCTTGAAGACGTATCG
GAGGATGACTGGGAAATCGCGCAAAGCCGACTGGACATCATTAGTCCTCTGCTCGCTCTCCGGCGGAACCGGACTAAGGC
GGACTATGTCGCTGTGGCAGCCAACGCAGGCGTGAGTGTCCCGACGCTCTATAACTGGCTGCGAACCTACCTTTCGTCCG
AGCAGTTGTCCTCGCTGATACCGACGCGCAAGAGCGGTGGTCGCGGGCGCAGCCGGCTAGCGCCTGAAGTGAAACTGATC
TTGGACCAGTACGTTCAAGAGCACTATCTAACCAAGCAGAAGCCGTCGGCAGCGAAGGCCGCCAGGGAGGTCCGCCGCTT
GTGCCATGTCGCAGCGCTTGAGCCTCTCCCAGCCGTGTCGACCATCTACCGACATCTAAGTTGGTTGGACGAGCAGGAAG
CGCTGAAGCGCCGTGAGGGGCGCCGCGCCGCTGAACAACGATTTGGTGTGAACAAGGGATCCATTCCGGACGCCGAATGG
CCGCTTGCCCTGGTTCAGGTCGATCACACTTTGTTGCCCGTCATCATCGTGGACGAGAAGCACCGTAAGTCGATCGGCCG
GGCCTGGATCACCTTGGCAATCGATGTGTTCAGCCGCGCCTGTTTGGGTATGTATTTGTCTCTGGATCCACCTTCAGCGA
TGTCTGCGGGTATGTGTATCTCGCACGCCATGTTGGACAAGGGCGAATGGATGGCACGGCTGGGATGTGGCGATATTGAG
TGGCCCTTCCGCGGCCCCATAGACGTCCTGCATATGGACAATGCCAAGGAGTTCAGAGGCAAGATGCTGGCCGTTGCTAC
GCGGGAGTACCACATCGACATTCATCTCCGGCCGGTCAAGCAGCCTCGCTATGGTGCGCATATCGAGCGGCTCATGGGTA
CCGTATCCGAGGAGTTGAAAGAACTCAAAGGGGCAACCTTCGCAAATCCCCAGCAGAAAGGAGAGTACGACGCCGAGGGC
AATGCCTGCATGACCATCGACGAACTGGAGAAATGGCTTGTCCTAATGTTCGCTCGATATCATCGAGACGTTCACGCCGG
CATTGGCACGACGCCATTGACCAAATGGACTGAGGGCATTCTCGGCACACGGGGAAAGATGGGGCGTGGAATCCCACCAA
TAGTCACCGACCCCGAGAAGCTCCGCATCGACTTCATGCCATATGTGGAGCGAACGATCCAAGGCGATGGCGTCGTCAAC
GAAAGAGTTCACTACTTCCATGACGTGTTGCGGCCATGGATCGGCGAGCGTGATCCTGATAATCCGAGGAAGGGCAAGCA
GTTCCGGTTTCGCTATGACCCGCGCGACATGAGCGTGCTGTACTTCTTCGATTCGGATCTCAAACGTTACCAGGCGATTC
CCTATCGAGATTCGAGCTTGCCGCCTGCAAGTTTTTGGGAGATTCGCGCGGCCAACAAAGCGGCGAAGGACGCCGGCATG
AAGGACTACAGCGAGCGAGATCTTTTTGCGCTGATCACTCGGCAGCGTGAACTCGAAGAGGCTGCCGCTGCACGGAGCAA
GGCGGCGCGTCGAGCAGAGCAGCAACGCAAGCAGCAAGAGAAGGCACGCGCGCGGAAGCCTCAAGATTTGCCGCGTGCTT
CGAAGGTGGATCCCTCCAGACTAGCGCCAAGCATCCGGGGATACGACCCTGACGATGTCCAACCGCTGAGCGATGATGAA
TAG

Upstream 100 bases:

>100_bases
GTTGATTCCGGTGCTTTGGCATCTTGTTGCCCATGGCGAAATTCACGTGGATTTGCAGATCCCGCTGGAAAGCACGCAAC
TGTTTCTACCGAGCTAGGTC

Downstream 100 bases:

>100_bases
CATGATGACTCAGTATGCTCACCTCAGCCCGACAGCACAGACGCACCTGGCGCTGCCGGACAAGGACCGCATTCGAGAGA
TCCAGACAGGCACGTGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF 480 [H]

Number of amino acids: Translated: 640; Mature: 639

Protein sequence:

>640_residues
MASKPLAKTPTLLSIKKGGSYSHDGRTYAILHYAGLDSVIAREDASGAMVILNVGSLKAPFKGLEGFPEPREHIDLEDVS
EDDWEIAQSRLDIISPLLALRRNRTKADYVAVAANAGVSVPTLYNWLRTYLSSEQLSSLIPTRKSGGRGRSRLAPEVKLI
LDQYVQEHYLTKQKPSAAKAAREVRRLCHVAALEPLPAVSTIYRHLSWLDEQEALKRREGRRAAEQRFGVNKGSIPDAEW
PLALVQVDHTLLPVIIVDEKHRKSIGRAWITLAIDVFSRACLGMYLSLDPPSAMSAGMCISHAMLDKGEWMARLGCGDIE
WPFRGPIDVLHMDNAKEFRGKMLAVATREYHIDIHLRPVKQPRYGAHIERLMGTVSEELKELKGATFANPQQKGEYDAEG
NACMTIDELEKWLVLMFARYHRDVHAGIGTTPLTKWTEGILGTRGKMGRGIPPIVTDPEKLRIDFMPYVERTIQGDGVVN
ERVHYFHDVLRPWIGERDPDNPRKGKQFRFRYDPRDMSVLYFFDSDLKRYQAIPYRDSSLPPASFWEIRAANKAAKDAGM
KDYSERDLFALITRQRELEEAAAARSKAARRAEQQRKQQEKARARKPQDLPRASKVDPSRLAPSIRGYDPDDVQPLSDDE

Sequences:

>Translated_640_residues
MASKPLAKTPTLLSIKKGGSYSHDGRTYAILHYAGLDSVIAREDASGAMVILNVGSLKAPFKGLEGFPEPREHIDLEDVS
EDDWEIAQSRLDIISPLLALRRNRTKADYVAVAANAGVSVPTLYNWLRTYLSSEQLSSLIPTRKSGGRGRSRLAPEVKLI
LDQYVQEHYLTKQKPSAAKAAREVRRLCHVAALEPLPAVSTIYRHLSWLDEQEALKRREGRRAAEQRFGVNKGSIPDAEW
PLALVQVDHTLLPVIIVDEKHRKSIGRAWITLAIDVFSRACLGMYLSLDPPSAMSAGMCISHAMLDKGEWMARLGCGDIE
WPFRGPIDVLHMDNAKEFRGKMLAVATREYHIDIHLRPVKQPRYGAHIERLMGTVSEELKELKGATFANPQQKGEYDAEG
NACMTIDELEKWLVLMFARYHRDVHAGIGTTPLTKWTEGILGTRGKMGRGIPPIVTDPEKLRIDFMPYVERTIQGDGVVN
ERVHYFHDVLRPWIGERDPDNPRKGKQFRFRYDPRDMSVLYFFDSDLKRYQAIPYRDSSLPPASFWEIRAANKAAKDAGM
KDYSERDLFALITRQRELEEAAAARSKAARRAEQQRKQQEKARARKPQDLPRASKVDPSRLAPSIRGYDPDDVQPLSDDE
>Mature_639_residues
ASKPLAKTPTLLSIKKGGSYSHDGRTYAILHYAGLDSVIAREDASGAMVILNVGSLKAPFKGLEGFPEPREHIDLEDVSE
DDWEIAQSRLDIISPLLALRRNRTKADYVAVAANAGVSVPTLYNWLRTYLSSEQLSSLIPTRKSGGRGRSRLAPEVKLIL
DQYVQEHYLTKQKPSAAKAAREVRRLCHVAALEPLPAVSTIYRHLSWLDEQEALKRREGRRAAEQRFGVNKGSIPDAEWP
LALVQVDHTLLPVIIVDEKHRKSIGRAWITLAIDVFSRACLGMYLSLDPPSAMSAGMCISHAMLDKGEWMARLGCGDIEW
PFRGPIDVLHMDNAKEFRGKMLAVATREYHIDIHLRPVKQPRYGAHIERLMGTVSEELKELKGATFANPQQKGEYDAEGN
ACMTIDELEKWLVLMFARYHRDVHAGIGTTPLTKWTEGILGTRGKMGRGIPPIVTDPEKLRIDFMPYVERTIQGDGVVNE
RVHYFHDVLRPWIGERDPDNPRKGKQFRFRYDPRDMSVLYFFDSDLKRYQAIPYRDSSLPPASFWEIRAANKAAKDAGMK
DYSERDLFALITRQRELEEAAAARSKAARRAEQQRKQQEKARARKPQDLPRASKVDPSRLAPSIRGYDPDDVQPLSDDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR015378
- InterPro:   IPR009004 [H]

Pfam domain/function: PF09299 Mu-transpos_C; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 72336; Mature: 72204

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKPLAKTPTLLSIKKGGSYSHDGRTYAILHYAGLDSVIAREDASGAMVILNVGSLKAP
CCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCEEEEECCCCCCC
FKGLEGFPEPREHIDLEDVSEDDWEIAQSRLDIISPLLALRRNRTKADYVAVAANAGVSV
HHHCCCCCCHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCH
PTLYNWLRTYLSSEQLSSLIPTRKSGGRGRSRLAPEVKLILDQYVQEHYLTKQKPSAAKA
HHHHHHHHHHHCHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH
AREVRRLCHVAALEPLPAVSTIYRHLSWLDEQEALKRREGRRAAEQRFGVNKGSIPDAEW
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PLALVQVDHTLLPVIIVDEKHRKSIGRAWITLAIDVFSRACLGMYLSLDPPSAMSAGMCI
CEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH
SHAMLDKGEWMARLGCGDIEWPFRGPIDVLHMDNAKEFRGKMLAVATREYHIDIHLRPVK
HHHHHCCCCHHHHCCCCCCCCCCCCCEEEEECCCHHHHHCCEEEEEEEEEEEEEEEEECC
QPRYGAHIERLMGTVSEELKELKGATFANPQQKGEYDAEGNACMTIDELEKWLVLMFARY
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCEEEEHHHHHHHHHHHHHHH
HRDVHAGIGTTPLTKWTEGILGTRGKMGRGIPPIVTDPEKLRIDFMPYVERTIQGDGVVN
HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEHHHHHHHHCCCCCHH
ERVHYFHDVLRPWIGERDPDNPRKGKQFRFRYDPRDMSVLYFFDSDLKRYQAIPYRDSSL
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHCCCCCCCCC
PPASFWEIRAANKAAKDAGMKDYSERDLFALITRQRELEEAAAARSKAARRAEQQRKQQE
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KARARKPQDLPRASKVDPSRLAPSIRGYDPDDVQPLSDDE
HHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASKPLAKTPTLLSIKKGGSYSHDGRTYAILHYAGLDSVIAREDASGAMVILNVGSLKAP
CCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCEEEEECCCCCCC
FKGLEGFPEPREHIDLEDVSEDDWEIAQSRLDIISPLLALRRNRTKADYVAVAANAGVSV
HHHCCCCCCHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCH
PTLYNWLRTYLSSEQLSSLIPTRKSGGRGRSRLAPEVKLILDQYVQEHYLTKQKPSAAKA
HHHHHHHHHHHCHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH
AREVRRLCHVAALEPLPAVSTIYRHLSWLDEQEALKRREGRRAAEQRFGVNKGSIPDAEW
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PLALVQVDHTLLPVIIVDEKHRKSIGRAWITLAIDVFSRACLGMYLSLDPPSAMSAGMCI
CEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH
SHAMLDKGEWMARLGCGDIEWPFRGPIDVLHMDNAKEFRGKMLAVATREYHIDIHLRPVK
HHHHHCCCCHHHHCCCCCCCCCCCCCEEEEECCCHHHHHCCEEEEEEEEEEEEEEEEECC
QPRYGAHIERLMGTVSEELKELKGATFANPQQKGEYDAEGNACMTIDELEKWLVLMFARY
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCEEEEHHHHHHHHHHHHHHH
HRDVHAGIGTTPLTKWTEGILGTRGKMGRGIPPIVTDPEKLRIDFMPYVERTIQGDGVVN
HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEHHHHHHHHCCCCCHH
ERVHYFHDVLRPWIGERDPDNPRKGKQFRFRYDPRDMSVLYFFDSDLKRYQAIPYRDSSL
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHCCCCCCCCC
PPASFWEIRAANKAAKDAGMKDYSERDLFALITRQRELEEAAAARSKAARRAEQQRKQQE
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KARARKPQDLPRASKVDPSRLAPSIRGYDPDDVQPLSDDE
HHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170815 [H]