| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928662
Identifier: 187928662
GI number: 187928662
Start: 1667624
End: 1668694
Strand: Reverse
Name: 187928662
Synonym: Rpic_1578
Alternate gene names: NA
Gene position: 1668694-1667624 (Counterclockwise)
Preceding gene: 187928663
Following gene: 187928654
Centisome position: 42.33
GC content: 58.17
Gene sequence:
>1071_bases ATGAAAACGTGGTCATGCGCAAAGACGCAGCTCTGGCCGATACGATACAAGCCCATACCTGGTGAGCTATTATCGAGCTG GATCGTGCGGCTAGCGCATGGCCATGGAATGGGCGTGATGCCGTTCTGCAACGTGGCGCTTGGTCCCATGGCTCTGCAAC TGACGATGGATATCGACCGACGCAGTCGAGAGTCCCTTCTGAAGGCGTTGGCGTTGCACACAGGAACGCATCCGGACGCA GTGCATCAAGCCACGCTGCGCGTCTACGAGGGGGTTCTCTATCGACAGTTTCACGTTGGGGGATTCCTCCCTTGGGTGAT CGCTATCAATCTGCCGCGGAGCGTCAGGCTTGGCCCAGGTCTCCAGTTTTGCCCGTACTGTCTCAGAAGTGACCCGGTAC CGTACTTCCGTCTCTCCTGGAGGGTTGCACTTCAAACCTTCTGTGAGCGGCACCAATGCTTGTTGCTGGATCGGTGCCCA GGCTGTGGCGCTTGCTTGTTTGTTCAGAGGGTCGATTCAAACTGGTGCCACGCGGAAATAGATGGTATTTGCCATTGCCA CAACTGCGATTTCGACCTCCGATTGGCGGAGGCACCTGCAGTAGACGATCGAGGGAGCGGGCTTTTAGCTCTGCTGCAGC AACTGACCCGCGAGCTTTCTGTCGTGAACGCGATAGGTCTGCCAGGCCTGTTAGAGCGTCTACACGCTATGGCGGTGACG CTGTTGTCGGGCAAGGCCAAGCCGCGCCTCTGCAATAGCCTTGCGTGTCGCTTCGGCTACGCTGACCTGGAAATTCAACA GGCCAGAATGCCGGCGTTCGAACTGCAATCTGTAGTGACACGGCATGCGGTGCTTCTTTGGTCCCTCTGGCTTCTTCAAC GCGACCCCGATGCGTACGAGCGGCCGGTCAAGCCGGTCGCTCCGCTACACCATCGGTTCATCAAAGAGATCCTGACGCAG CCACGAATCGATGCGGGTGGTCAGACGGGCTGCGACTCGTTCGGAGACCTTTCAATCGCAGGGGAGAGTTCAGCGCAGAT ACGCGATGGCCGCGTGGTACAGCTGCATTGA
Upstream 100 bases:
>100_bases TGGAGGCAGTTAGGTCCGGTGAAGAAGCGATTACGGAGAAGTTGCTTGCCGATCTGGATTGGGTTCCGCCCTCCAAGCGT AAGACCTACAGGCGGAGACT
Downstream 100 bases:
>100_bases GATCCAGGAGCGTAACTCGTCAGGGGCACTGACCTGAGTGTGCTCCAAGGCCATCACCTGATAACCAGTTCCATTCTGCA CCGAGATAAACGCCCCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKTWSCAKTQLWPIRYKPIPGELLSSWIVRLAHGHGMGVMPFCNVALGPMALQLTMDIDRRSRESLLKALALHTGTHPDA VHQATLRVYEGVLYRQFHVGGFLPWVIAINLPRSVRLGPGLQFCPYCLRSDPVPYFRLSWRVALQTFCERHQCLLLDRCP GCGACLFVQRVDSNWCHAEIDGICHCHNCDFDLRLAEAPAVDDRGSGLLALLQQLTRELSVVNAIGLPGLLERLHAMAVT LLSGKAKPRLCNSLACRFGYADLEIQQARMPAFELQSVVTRHAVLLWSLWLLQRDPDAYERPVKPVAPLHHRFIKEILTQ PRIDAGGQTGCDSFGDLSIAGESSAQIRDGRVVQLH
Sequences:
>Translated_356_residues MKTWSCAKTQLWPIRYKPIPGELLSSWIVRLAHGHGMGVMPFCNVALGPMALQLTMDIDRRSRESLLKALALHTGTHPDA VHQATLRVYEGVLYRQFHVGGFLPWVIAINLPRSVRLGPGLQFCPYCLRSDPVPYFRLSWRVALQTFCERHQCLLLDRCP GCGACLFVQRVDSNWCHAEIDGICHCHNCDFDLRLAEAPAVDDRGSGLLALLQQLTRELSVVNAIGLPGLLERLHAMAVT LLSGKAKPRLCNSLACRFGYADLEIQQARMPAFELQSVVTRHAVLLWSLWLLQRDPDAYERPVKPVAPLHHRFIKEILTQ PRIDAGGQTGCDSFGDLSIAGESSAQIRDGRVVQLH >Mature_356_residues MKTWSCAKTQLWPIRYKPIPGELLSSWIVRLAHGHGMGVMPFCNVALGPMALQLTMDIDRRSRESLLKALALHTGTHPDA VHQATLRVYEGVLYRQFHVGGFLPWVIAINLPRSVRLGPGLQFCPYCLRSDPVPYFRLSWRVALQTFCERHQCLLLDRCP GCGACLFVQRVDSNWCHAEIDGICHCHNCDFDLRLAEAPAVDDRGSGLLALLQQLTRELSVVNAIGLPGLLERLHAMAVT LLSGKAKPRLCNSLACRFGYADLEIQQARMPAFELQSVVTRHAVLLWSLWLLQRDPDAYERPVKPVAPLHHRFIKEILTQ PRIDAGGQTGCDSFGDLSIAGESSAQIRDGRVVQLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39806; Mature: 39806
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTWSCAKTQLWPIRYKPIPGELLSSWIVRLAHGHGMGVMPFCNVALGPMALQLTMDIDR CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEEECCCH RSRESLLKALALHTGTHPDAVHQATLRVYEGVLYRQFHVGGFLPWVIAINLPRSVRLGPG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCC LQFCPYCLRSDPVPYFRLSWRVALQTFCERHQCLLLDRCPGCGACLFVQRVDSNWCHAEI CHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCEEEC DGICHCHNCDFDLRLAEAPAVDDRGSGLLALLQQLTRELSVVNAIGLPGLLERLHAMAVT CCEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LLSGKAKPRLCNSLACRFGYADLEIQQARMPAFELQSVVTRHAVLLWSLWLLQRDPDAYE HHCCCCCCHHHHHHHHHCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH RPVKPVAPLHHRFIKEILTQPRIDAGGQTGCDSFGDLSIAGESSAQIRDGRVVQLH CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCEECCCEEEEEC >Mature Secondary Structure MKTWSCAKTQLWPIRYKPIPGELLSSWIVRLAHGHGMGVMPFCNVALGPMALQLTMDIDR CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEEECCCH RSRESLLKALALHTGTHPDAVHQATLRVYEGVLYRQFHVGGFLPWVIAINLPRSVRLGPG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCC LQFCPYCLRSDPVPYFRLSWRVALQTFCERHQCLLLDRCPGCGACLFVQRVDSNWCHAEI CHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCEEEC DGICHCHNCDFDLRLAEAPAVDDRGSGLLALLQQLTRELSVVNAIGLPGLLERLHAMAVT CCEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LLSGKAKPRLCNSLACRFGYADLEIQQARMPAFELQSVVTRHAVLLWSLWLLQRDPDAYE HHCCCCCCHHHHHHHHHCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH RPVKPVAPLHHRFIKEILTQPRIDAGGQTGCDSFGDLSIAGESSAQIRDGRVVQLH CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA