Click here to switch to the map view.

The map label for this gene is 187928660

Identifier: 187928660

GI number: 187928660

Start: 1664199

End: 1665926

Strand: Direct

Name: 187928660

Synonym: Rpic_1576

Alternate gene names: NA

Gene position: 1664199-1665926 (Clockwise)

Preceding gene: 187928659

Following gene: 187928661

Centisome position: 42.21

GC content: 42.77

Gene sequence:

>1728_bases
ATGTTTCTAAAGTCGCTTCGAATTGAGAATGAAAACGGTGTCATTCGACATATACCTTTTCATGCAGGTCTCAATCTCAT
TGTTGATGAAACGCCGGACAGCAATAACGAGGCGACAGGAAACAATGTTGGCAAAACGACAGTACTACGCTTGATAGATT
TCTGCTTTGGTGGCAGTCCGAAAGAGATTTACACGGACCCGGAAGACAGGAAGAGCGAGCATCAGATCGTCAAAAATTTC
CTGCAAAAAACGTATGTTTTGATTACATTGACACTCACGTCGGATCTTTCGAATCCTCGCTCGGAGGAGATTGTCATCGA
AAGAAATTTTCTCCCTAGAAAGGGAATGATCCGTCGAATCAACGGCAATCAATTAACAGAAGAAGAATTCACGCACACCC
TCACAGAGAAACTTTTTCCTGGCCAATCCGGCAAAAAGCCCTCGTTGGGTCAGCTAATTTCACACAATATCCGTTACAAG
GATTTCTCGCTTACAAACACCCTTCGTCATGTTCATCCCATGACAAAGGATGAGGAATACGAAGCACTTCACCTCTACAT
GCTGGGGTGTGATTTCTCACGTGGGGATGAGAGACAAAAGCTCATCGGCGATTTGCGTGTTGAGAATGCTTTTAAGGCAA
GATTGGAGGCCGCTGGATCAAAGTTCGTATATGAGACGCTTCTTTCGCGAATCCAACGCGAAATCGAAAAACTCAATCAC
CGAAGAGCCTCCTTTAACATCAATCCAGATTTTGAAAGAGATTTGCAGCGTCTCGATGAAATCAAGTACGGAATCAACAC
CGAGTCGTCCATAATTGGAGCAATAAAGCTGCGGCGCAATTTGCTGACCGAAGCAGTCGCCGATACGCAAGCACGTCGAT
TTCAAGTAGACACAGTTCAGTTAAAAGCACTTTACGCGGAAGTATCCTCTCGGCTATCTGGGGTGCAAAAGACATTTGAT
GAATTGGTTGAATTTCACAACAAAATGGTCGACGAGAAATCTAGATACATTTCTCGGGACATACCTTTGTTGGAAGAGGA
GATAGCGAACCGAGAGGCTGAACTGAGTCGTCTACTCGACTTGGAAAGAAATCTTGCCGCCAAGCTGGCCAAAAGTGGTT
CGCTCAATGAGCTTGAACTTGTAATATCGGAACTGAACGAGAAACATCGGCTGCTTGGAGAGTATCAAACTGTTATCAGA
CAGATCGACGCAACGAGCGAAAGAATAGGAAAAATTGAGGGACAACTATCGGAGATTGACGGCGATTTGTTTTCAGGCGA
AACACAATCCGTCATTCAATCTCAGGTACATAGATTCAATGAATTTTTCTCGAAAATATCCGAAGAACTTTACGATGAGC
AATACGCACTCACTTTTGAAATTGTAAAAACAAGGTCAGGAAGACAGGTTTACAAGTTCAAAACGTTCAACATGAACATG
AGTTCCGGAAAGAAGCAAGGTGAGATATCTTGCTTTGATATCGCATATACACTATTCGCGGACGACGAAAATATTCCATG
CATGCATTTCTTACTAAACGACAAGAAAGAGCTCATGCATGACAATCAGTTATTAAAAATCGCCAACCTCGTAGAAAGAG
AGAAAACGCATATCCAATTTGTGGCCTCGATGCTAAGAGATAAATTGCCGCCCGAGCTCAACAGCGACAATTTTATTGTC
CTAAAACTTTCACAAGATGATATGCTCTTTAATATTGAATCCAATTAA

Upstream 100 bases:

>100_bases
GAAAGCTCCGAGAAATTCAGATGCCAATTTTCACGCTCTCTCTGGATTGGCTTTTCCTTGCAGAGCTGGTTAACTTCAAT
GATCGTGGAAATATCGAGCC

Downstream 100 bases:

>100_bases
ATGGTTCAAGCCCCTCGCGAAAGCGCATGATCGTGATTTGAAAGCGAAATCAAGGGTGCATGCTTCGCATAAACGCGTTC
CCCAAAAGCGAGGACCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MFLKSLRIENENGVIRHIPFHAGLNLIVDETPDSNNEATGNNVGKTTVLRLIDFCFGGSPKEIYTDPEDRKSEHQIVKNF
LQKTYVLITLTLTSDLSNPRSEEIVIERNFLPRKGMIRRINGNQLTEEEFTHTLTEKLFPGQSGKKPSLGQLISHNIRYK
DFSLTNTLRHVHPMTKDEEYEALHLYMLGCDFSRGDERQKLIGDLRVENAFKARLEAAGSKFVYETLLSRIQREIEKLNH
RRASFNINPDFERDLQRLDEIKYGINTESSIIGAIKLRRNLLTEAVADTQARRFQVDTVQLKALYAEVSSRLSGVQKTFD
ELVEFHNKMVDEKSRYISRDIPLLEEEIANREAELSRLLDLERNLAAKLAKSGSLNELELVISELNEKHRLLGEYQTVIR
QIDATSERIGKIEGQLSEIDGDLFSGETQSVIQSQVHRFNEFFSKISEELYDEQYALTFEIVKTRSGRQVYKFKTFNMNM
SSGKKQGEISCFDIAYTLFADDENIPCMHFLLNDKKELMHDNQLLKIANLVEREKTHIQFVASMLRDKLPPELNSDNFIV
LKLSQDDMLFNIESN

Sequences:

>Translated_575_residues
MFLKSLRIENENGVIRHIPFHAGLNLIVDETPDSNNEATGNNVGKTTVLRLIDFCFGGSPKEIYTDPEDRKSEHQIVKNF
LQKTYVLITLTLTSDLSNPRSEEIVIERNFLPRKGMIRRINGNQLTEEEFTHTLTEKLFPGQSGKKPSLGQLISHNIRYK
DFSLTNTLRHVHPMTKDEEYEALHLYMLGCDFSRGDERQKLIGDLRVENAFKARLEAAGSKFVYETLLSRIQREIEKLNH
RRASFNINPDFERDLQRLDEIKYGINTESSIIGAIKLRRNLLTEAVADTQARRFQVDTVQLKALYAEVSSRLSGVQKTFD
ELVEFHNKMVDEKSRYISRDIPLLEEEIANREAELSRLLDLERNLAAKLAKSGSLNELELVISELNEKHRLLGEYQTVIR
QIDATSERIGKIEGQLSEIDGDLFSGETQSVIQSQVHRFNEFFSKISEELYDEQYALTFEIVKTRSGRQVYKFKTFNMNM
SSGKKQGEISCFDIAYTLFADDENIPCMHFLLNDKKELMHDNQLLKIANLVEREKTHIQFVASMLRDKLPPELNSDNFIV
LKLSQDDMLFNIESN
>Mature_575_residues
MFLKSLRIENENGVIRHIPFHAGLNLIVDETPDSNNEATGNNVGKTTVLRLIDFCFGGSPKEIYTDPEDRKSEHQIVKNF
LQKTYVLITLTLTSDLSNPRSEEIVIERNFLPRKGMIRRINGNQLTEEEFTHTLTEKLFPGQSGKKPSLGQLISHNIRYK
DFSLTNTLRHVHPMTKDEEYEALHLYMLGCDFSRGDERQKLIGDLRVENAFKARLEAAGSKFVYETLLSRIQREIEKLNH
RRASFNINPDFERDLQRLDEIKYGINTESSIIGAIKLRRNLLTEAVADTQARRFQVDTVQLKALYAEVSSRLSGVQKTFD
ELVEFHNKMVDEKSRYISRDIPLLEEEIANREAELSRLLDLERNLAAKLAKSGSLNELELVISELNEKHRLLGEYQTVIR
QIDATSERIGKIEGQLSEIDGDLFSGETQSVIQSQVHRFNEFFSKISEELYDEQYALTFEIVKTRSGRQVYKFKTFNMNM
SSGKKQGEISCFDIAYTLFADDENIPCMHFLLNDKKELMHDNQLLKIANLVEREKTHIQFVASMLRDKLPPELNSDNFIV
LKLSQDDMLFNIESN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66368; Mature: 66368

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKSLRIENENGVIRHIPFHAGLNLIVDETPDSNNEATGNNVGKTTVLRLIDFCFGGSP
CCCCCEEEECCCCEEEEECHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
KEIYTDPEDRKSEHQIVKNFLQKTYVLITLTLTSDLSNPRSEEIVIERNFLPRKGMIRRI
CCCCCCCCCCCHHHHHHHHHHHCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEC
NGNQLTEEEFTHTLTEKLFPGQSGKKPSLGQLISHNIRYKDFSLTNTLRHVHPMTKDEEY
CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCC
EALHLYMLGCDFSRGDERQKLIGDLRVENAFKARLEAAGSKFVYETLLSRIQREIEKLNH
CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
RRASFNINPDFERDLQRLDEIKYGINTESSIIGAIKLRRNLLTEAVADTQARRFQVDTVQ
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHH
LKALYAEVSSRLSGVQKTFDELVEFHNKMVDEKSRYISRDIPLLEEEIANREAELSRLLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHH
LERNLAAKLAKSGSLNELELVISELNEKHRLLGEYQTVIRQIDATSERIGKIEGQLSEID
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC
GDLFSGETQSVIQSQVHRFNEFFSKISEELYDEQYALTFEIVKTRSGRQVYKFKTFNMNM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEECCCCCEEEEEEEEECCC
SSGKKQGEISCFDIAYTLFADDENIPCMHFLLNDKKELMHDNQLLKIANLVEREKTHIQF
CCCCCCCCEEEEEEEEEEEECCCCCCEEHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHH
VASMLRDKLPPELNSDNFIVLKLSQDDMLFNIESN
HHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCC
>Mature Secondary Structure
MFLKSLRIENENGVIRHIPFHAGLNLIVDETPDSNNEATGNNVGKTTVLRLIDFCFGGSP
CCCCCEEEECCCCEEEEECHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
KEIYTDPEDRKSEHQIVKNFLQKTYVLITLTLTSDLSNPRSEEIVIERNFLPRKGMIRRI
CCCCCCCCCCCHHHHHHHHHHHCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEC
NGNQLTEEEFTHTLTEKLFPGQSGKKPSLGQLISHNIRYKDFSLTNTLRHVHPMTKDEEY
CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCC
EALHLYMLGCDFSRGDERQKLIGDLRVENAFKARLEAAGSKFVYETLLSRIQREIEKLNH
CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
RRASFNINPDFERDLQRLDEIKYGINTESSIIGAIKLRRNLLTEAVADTQARRFQVDTVQ
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHH
LKALYAEVSSRLSGVQKTFDELVEFHNKMVDEKSRYISRDIPLLEEEIANREAELSRLLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHH
LERNLAAKLAKSGSLNELELVISELNEKHRLLGEYQTVIRQIDATSERIGKIEGQLSEID
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC
GDLFSGETQSVIQSQVHRFNEFFSKISEELYDEQYALTFEIVKTRSGRQVYKFKTFNMNM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEECCCCCEEEEEEEEECCC
SSGKKQGEISCFDIAYTLFADDENIPCMHFLLNDKKELMHDNQLLKIANLVEREKTHIQF
CCCCCCCCEEEEEEEEEEEECCCCCCEEHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHH
VASMLRDKLPPELNSDNFIVLKLSQDDMLFNIESN
HHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA