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The map label for this gene is 187928641

Identifier: 187928641

GI number: 187928641

Start: 1646510

End: 1647697

Strand: Direct

Name: 187928641

Synonym: Rpic_1557

Alternate gene names: NA

Gene position: 1646510-1647697 (Clockwise)

Preceding gene: 187928640

Following gene: 187928642

Centisome position: 41.76

GC content: 65.32

Gene sequence:

>1188_bases
GTGCAGACGCGCATCAATCTCAAGCCGATCCTGGCGAACTACTCGCTGCCGGAACGGTTCAAGTCGGAATTCGCGGTCTT
GGCGGGCGAGAACCTGCACAAGCCGCACAGCCAGACCCGCGTCAGCGGTCGCGCGCTGTCGTCGATCTCGCAGAAACAGC
GCGCGCAGATGTTGCTCAGTCTCGCAGTGGAGCTGCGTGAGGGCGGCTTCACCATCATGTCGCCCTACAACCTGGCGGAG
AAGCACCTGCGATGGTTGGTGCAGCGTTGGGTGACAGAACGAAACCTCGCGGTGGGCAGCGTTGAACTGCGCCTCTCACA
CCTGCGCGCGCTGTGCTCGTGGATGGGCAAGACCAACATGGTGGGCGGCATCGATGACTACGTGGAGAGGCCGGCAGGCT
ACACGCGCAGCTACGCCGCCGAGACCGACCGTTCTTGGGACGGCAACAACATCGACGCGCTAGCCAAGATCGAGGAGATC
GCCCAGACGGATGCCCACGTCGCAATTCAACTGAAGCTTGAGGCAGCGTTCGGGTTGCGCGCGAAGGAAAGCTGGCGACT
GCGCCCAGCGCGCGACCTACTTCCATCGGGCTATCTGCACGTGCAGGACGGCACCAAGGGAGGCCGGCCGCGACAGGTGC
TGATCGAGTTCGATTGGCAGTACGACCTGCTTGCGGAGGCGGCTGAGTTGGCCGCGTGCACGAATCCCGAACGGGGCTCC
CTGATCCCGGCGACCTATACGCAGGTGCAGTGGCGCAGGCGCTTCTATACCGTGCTGGAAAAGCACGCCGTGACCAAGCG
CGGCGACGGTGTCACCGCCCACGGTCTACGACACCAGTTCCTGCAGCAGATGTACCAACGGCTGACCGGTGAGCAAGCGG
CCATCAAGGGGGGCGCACGCGTTCTCGACCGTGAAGCGCACAAGGACGCCATGACGCGGGTGGTGGAAGCCGCCGGCCAC
AGCCGCAAGGAGAAGGCCAACGCCTACCTGTCGACGCATTCCGCGATCGCAGCCCGGAGCCGGCCCGTCGTCACACGTGA
GATGGCCGTCGCGGCGGTTGCCGCGGCCAATGGGGTCAAGCTGAAGGCGGCAGAGGCCCTGGGCATTTCGCGCCCCGCAC
TGTATCGCCTGCTTGCCAAGCCCGCCGAGGCGGGTACTGCGGCCGGCCATCGGCACTTCACGGGATGA

Upstream 100 bases:

>100_bases
GCCAGCACGGGGGTGCGGATTCCGTGAGTGCGGCGCGGTTGCCGGCGGGGAAACCTGCGTCGAGGACGTGCGCGCTGCGC
AACCAATACTCGGAGTCACG

Downstream 100 bases:

>100_bases
GGTCGTGCGATGACTGAAGATGACGCAATGGCCGATGGCGATTGGGATACCTACCTGTTTCCAGAGCCAGAGCTGCGGGC
GTGCACAGACGAAGAACTGT

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: Fis Family Transcriptional Regulator; Poisomerase/Recombinase/Integrase; DNA Breaking-Rejoining Protein; Tyrosine Recombinase; Phage Integrase Family Protein; Phage Integrase N-Terminal SAM-Like; Regulatory Protein; Integrase Protein; Phage Integrase N-Terminal SAM-Like Protein; Transcriptional Regulator Fis Family

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MQTRINLKPILANYSLPERFKSEFAVLAGENLHKPHSQTRVSGRALSSISQKQRAQMLLSLAVELREGGFTIMSPYNLAE
KHLRWLVQRWVTERNLAVGSVELRLSHLRALCSWMGKTNMVGGIDDYVERPAGYTRSYAAETDRSWDGNNIDALAKIEEI
AQTDAHVAIQLKLEAAFGLRAKESWRLRPARDLLPSGYLHVQDGTKGGRPRQVLIEFDWQYDLLAEAAELAACTNPERGS
LIPATYTQVQWRRRFYTVLEKHAVTKRGDGVTAHGLRHQFLQQMYQRLTGEQAAIKGGARVLDREAHKDAMTRVVEAAGH
SRKEKANAYLSTHSAIAARSRPVVTREMAVAAVAAANGVKLKAAEALGISRPALYRLLAKPAEAGTAAGHRHFTG

Sequences:

>Translated_395_residues
MQTRINLKPILANYSLPERFKSEFAVLAGENLHKPHSQTRVSGRALSSISQKQRAQMLLSLAVELREGGFTIMSPYNLAE
KHLRWLVQRWVTERNLAVGSVELRLSHLRALCSWMGKTNMVGGIDDYVERPAGYTRSYAAETDRSWDGNNIDALAKIEEI
AQTDAHVAIQLKLEAAFGLRAKESWRLRPARDLLPSGYLHVQDGTKGGRPRQVLIEFDWQYDLLAEAAELAACTNPERGS
LIPATYTQVQWRRRFYTVLEKHAVTKRGDGVTAHGLRHQFLQQMYQRLTGEQAAIKGGARVLDREAHKDAMTRVVEAAGH
SRKEKANAYLSTHSAIAARSRPVVTREMAVAAVAAANGVKLKAAEALGISRPALYRLLAKPAEAGTAAGHRHFTG
>Mature_395_residues
MQTRINLKPILANYSLPERFKSEFAVLAGENLHKPHSQTRVSGRALSSISQKQRAQMLLSLAVELREGGFTIMSPYNLAE
KHLRWLVQRWVTERNLAVGSVELRLSHLRALCSWMGKTNMVGGIDDYVERPAGYTRSYAAETDRSWDGNNIDALAKIEEI
AQTDAHVAIQLKLEAAFGLRAKESWRLRPARDLLPSGYLHVQDGTKGGRPRQVLIEFDWQYDLLAEAAELAACTNPERGS
LIPATYTQVQWRRRFYTVLEKHAVTKRGDGVTAHGLRHQFLQQMYQRLTGEQAAIKGGARVLDREAHKDAMTRVVEAAGH
SRKEKANAYLSTHSAIAARSRPVVTREMAVAAVAAANGVKLKAAEALGISRPALYRLLAKPAEAGTAAGHRHFTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43858; Mature: 43858

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTRINLKPILANYSLPERFKSEFAVLAGENLHKPHSQTRVSGRALSSISQKQRAQMLLS
CCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAVELREGGFTIMSPYNLAEKHLRWLVQRWVTERNLAVGSVELRLSHLRALCSWMGKTNM
HHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCC
VGGIDDYVERPAGYTRSYAAETDRSWDGNNIDALAKIEEIAQTDAHVAIQLKLEAAFGLR
CCCHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEHHHCCC
AKESWRLRPARDLLPSGYLHVQDGTKGGRPRQVLIEFDWQYDLLAEAAELAACTNPERGS
CCCCCCCCCHHHCCCCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCC
LIPATYTQVQWRRRFYTVLEKHAVTKRGDGVTAHGLRHQFLQQMYQRLTGEQAAIKGGAR
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHH
VLDREAHKDAMTRVVEAAGHSRKEKANAYLSTHSAIAARSRPVVTREMAVAAVAAANGVK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCE
LKAAEALGISRPALYRLLAKPAEAGTAAGHRHFTG
EEHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQTRINLKPILANYSLPERFKSEFAVLAGENLHKPHSQTRVSGRALSSISQKQRAQMLLS
CCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAVELREGGFTIMSPYNLAEKHLRWLVQRWVTERNLAVGSVELRLSHLRALCSWMGKTNM
HHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCC
VGGIDDYVERPAGYTRSYAAETDRSWDGNNIDALAKIEEIAQTDAHVAIQLKLEAAFGLR
CCCHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEHHHCCC
AKESWRLRPARDLLPSGYLHVQDGTKGGRPRQVLIEFDWQYDLLAEAAELAACTNPERGS
CCCCCCCCCHHHCCCCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCC
LIPATYTQVQWRRRFYTVLEKHAVTKRGDGVTAHGLRHQFLQQMYQRLTGEQAAIKGGAR
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHH
VLDREAHKDAMTRVVEAAGHSRKEKANAYLSTHSAIAARSRPVVTREMAVAAVAAANGVK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCE
LKAAEALGISRPALYRLLAKPAEAGTAAGHRHFTG
EEHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA