| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928630
Identifier: 187928630
GI number: 187928630
Start: 1637845
End: 1639053
Strand: Reverse
Name: 187928630
Synonym: Rpic_1546
Alternate gene names: NA
Gene position: 1639053-1637845 (Counterclockwise)
Preceding gene: 187928637
Following gene: 187928629
Centisome position: 41.57
GC content: 58.31
Gene sequence:
>1209_bases ATGACTCATACGGACTTCCAGCTTGCGCAAACGATCACGGACGACGGTTCTGTCTCCGCCATGACATTCGCGAGGACCCA GTTCATGGACCTGGACGAATCGTCGATTGGCCGAATCGCACAGGCGACCGAGGAAATCTGGCAGTCGCAAAACCGTGTCG TGGCCGAGTTCATCGCAATTGGGGCACGGCTGGTCCACATTGACGGCATCATCATGGGGAGCCTCACGCGCACCCTCGGT GATGAGACCGTGGCCAGGAAGCGCGGGAGTGCCATGCTGTCCAGCTACGCAAGCACCGTCCTTCGGATGACCGATTCACG CGTGGCTCTCTACATCAACATCTACAGGAAGTTTGCGAACAACAGCCGGGCCATCACCAACCTGACCTTGGGTGAGATGA AGATCTTGGCCCGCAAGGACATCACCGATGACGAAGTCGACAAGGTCATCGAGCACAAGTTGAAGACGGATAGCTTTAAA CGCGAGGACATCCGGCCGATCATCGAGAAGCTTCGGAAGACAGAAGAGGATCTGACCAATACCGGCCTGCAGCTCCAAGT CACGCAGGAAGAGCTGAACGAAAACCTGAACAACAACCGCGATCTTGAAGCACAGATTCGAACTCTGGCTGCCCAACTCA CGGTGTCCCAGGAGGAGGTGGCCAATCGGCAGCGTGCCATGGACGAAGCACAACTCCAGGTCACCCGCAGCTCTTCGACC GTCAGCACGCTACAGCAAGAGATCGACCGTCTCACGCGCGAACGCAACGCGCTAGCAGCAAGGGCAGAGAGCGGCCAACC GGCGGCTGTGAAAGAGACAGTCGAAGTGCACGTTCTGCCGCCAGGACTCCAGACCCTGGACGATGCGCTCCAAGAAGCCA ACCGTCGCCTCGAAGCGGCCAATGAGGACGTTAAGCGCAAGCAGGACGAGCTTGATCGACTCAACCTGGAAATCGCACAA CAGCAGGACGACATCAACTCGTCTGCTGACGCCAGAGCGAAGATGATCACGCTGGTTGCCGACATCGAATCCGTCGCACA CAAATACCAGTCTGCGCAACTCACGGCCATCTTTGCCAACGCATCGGCCGAATGCCGTCCCATTCTCGAAGGCCTCGCTG GCGTCCTGACCAAATTCCTCGGTGAAGTGAACGCTGCGCTCGCGACCACCGAGACCACAAACCGCGTGTCCCGCCGGACA CGCACGTAA
Upstream 100 bases:
>100_bases AGGAGGTGCATTCGCGGTAACCATCCGCATCGCACCGCCCGTTTGGCGCCTGAGCACATCTGGCTCCGGTCACGAGAACA CTCCACTGGCTTACATCGAC
Downstream 100 bases:
>100_bases ACCGCCTGATTCAAGCGCCGGTCCCAAAAACAACAACTGACTCTCTCGCCATGACTCGTTCGACTGCTCTTTCTGCCAAA GACTCGCTCATCCTTCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTHTDFQLAQTITDDGSVSAMTFARTQFMDLDESSIGRIAQATEEIWQSQNRVVAEFIAIGARLVHIDGIIMGSLTRTLG DETVARKRGSAMLSSYASTVLRMTDSRVALYINIYRKFANNSRAITNLTLGEMKILARKDITDDEVDKVIEHKLKTDSFK REDIRPIIEKLRKTEEDLTNTGLQLQVTQEELNENLNNNRDLEAQIRTLAAQLTVSQEEVANRQRAMDEAQLQVTRSSST VSTLQQEIDRLTRERNALAARAESGQPAAVKETVEVHVLPPGLQTLDDALQEANRRLEAANEDVKRKQDELDRLNLEIAQ QQDDINSSADARAKMITLVADIESVAHKYQSAQLTAIFANASAECRPILEGLAGVLTKFLGEVNAALATTETTNRVSRRT RT
Sequences:
>Translated_402_residues MTHTDFQLAQTITDDGSVSAMTFARTQFMDLDESSIGRIAQATEEIWQSQNRVVAEFIAIGARLVHIDGIIMGSLTRTLG DETVARKRGSAMLSSYASTVLRMTDSRVALYINIYRKFANNSRAITNLTLGEMKILARKDITDDEVDKVIEHKLKTDSFK REDIRPIIEKLRKTEEDLTNTGLQLQVTQEELNENLNNNRDLEAQIRTLAAQLTVSQEEVANRQRAMDEAQLQVTRSSST VSTLQQEIDRLTRERNALAARAESGQPAAVKETVEVHVLPPGLQTLDDALQEANRRLEAANEDVKRKQDELDRLNLEIAQ QQDDINSSADARAKMITLVADIESVAHKYQSAQLTAIFANASAECRPILEGLAGVLTKFLGEVNAALATTETTNRVSRRT RT >Mature_401_residues THTDFQLAQTITDDGSVSAMTFARTQFMDLDESSIGRIAQATEEIWQSQNRVVAEFIAIGARLVHIDGIIMGSLTRTLGD ETVARKRGSAMLSSYASTVLRMTDSRVALYINIYRKFANNSRAITNLTLGEMKILARKDITDDEVDKVIEHKLKTDSFKR EDIRPIIEKLRKTEEDLTNTGLQLQVTQEELNENLNNNRDLEAQIRTLAAQLTVSQEEVANRQRAMDEAQLQVTRSSSTV STLQQEIDRLTRERNALAARAESGQPAAVKETVEVHVLPPGLQTLDDALQEANRRLEAANEDVKRKQDELDRLNLEIAQQ QDDINSSADARAKMITLVADIESVAHKYQSAQLTAIFANASAECRPILEGLAGVLTKFLGEVNAALATTETTNRVSRRTR T
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44796; Mature: 44665
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHTDFQLAQTITDDGSVSAMTFARTQFMDLDESSIGRIAQATEEIWQSQNRVVAEFIAI CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH GARLVHIDGIIMGSLTRTLGDETVARKRGSAMLSSYASTVLRMTDSRVALYINIYRKFAN HHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCC NSRAITNLTLGEMKILARKDITDDEVDKVIEHKLKTDSFKREDIRPIIEKLRKTEEDLTN CCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC TGLQLQVTQEELNENLNNNRDLEAQIRTLAAQLTVSQEEVANRQRAMDEAQLQVTRSSST CCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCHHH VSTLQQEIDRLTRERNALAARAESGQPAAVKETVEVHVLPPGLQTLDDALQEANRRLEAA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEEEECCCHHHHHHHHHHHHHHHHHH NEDVKRKQDELDRLNLEIAQQQDDINSSADARAKMITLVADIESVAHKYQSAQLTAIFAN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC ASAECRPILEGLAGVLTKFLGEVNAALATTETTNRVSRRTRT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure THTDFQLAQTITDDGSVSAMTFARTQFMDLDESSIGRIAQATEEIWQSQNRVVAEFIAI CCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH GARLVHIDGIIMGSLTRTLGDETVARKRGSAMLSSYASTVLRMTDSRVALYINIYRKFAN HHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCC NSRAITNLTLGEMKILARKDITDDEVDKVIEHKLKTDSFKREDIRPIIEKLRKTEEDLTN CCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC TGLQLQVTQEELNENLNNNRDLEAQIRTLAAQLTVSQEEVANRQRAMDEAQLQVTRSSST CCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCHHH VSTLQQEIDRLTRERNALAARAESGQPAAVKETVEVHVLPPGLQTLDDALQEANRRLEAA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEEEECCCHHHHHHHHHHHHHHHHHH NEDVKRKQDELDRLNLEIAQQQDDINSSADARAKMITLVADIESVAHKYQSAQLTAIFAN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC ASAECRPILEGLAGVLTKFLGEVNAALATTETTNRVSRRTRT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA