| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928627
Identifier: 187928627
GI number: 187928627
Start: 1635553
End: 1635996
Strand: Reverse
Name: 187928627
Synonym: Rpic_1543
Alternate gene names: NA
Gene position: 1635996-1635553 (Counterclockwise)
Preceding gene: 187928628
Following gene: 187928626
Centisome position: 41.5
GC content: 58.78
Gene sequence:
>444_bases ATGACCACATTCTGCAAGTTCGACATCCCGGCGTTTACCGCAACCGTGCGCAAGAAGGCAAAGCTCCTGCTGGCCATCGC CGCCACCGCCATCATCACGGCATGTGGCTCGTCGACGAGCGACATCGTCGGCGAATACTCCGTCCAGGGAAAGAACGGGC TCGAGCCAACGCTTCGGATCGAGAAGGCAGACGGCAAACTCGCCGTTCAGGAGTTCCACAACGGCAATTGGCGAGCCATC CAGGGCCCGGTCAATGATCTGACCAAAGAGCAAGCTCAAGCGCTCTTCGGCCGCGCCGTTAGTGAATCAGTCAGCGGGAT ATCCACGAAGGACTTTGCGCTCGTCCATGTCCCTTCGAACTGGAGCAACAAGGACTTCCCAACGACGACGGGGTATCTGC TCGTTTCGATGCTCGGGCCCGTGGAACTGCACAAGGTCAAGTAG
Upstream 100 bases:
>100_bases CTCTTCGGCACCGGCAAGCGAGAAAGCGCGCTTACCCATAATGCATTCACCACGATCAGCACGACGGCCCCAGCCGACAC AACTCACAGCCCACAATCAC
Downstream 100 bases:
>100_bases CAACGCGTTGCTGCCGACCGCCCCCGCACACGTTGAGCGCGGCATCTGAAGTACCTGGAGTGCATCCTTGACTTCTTGAG CCGCACGCTACGATTAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTTFCKFDIPAFTATVRKKAKLLLAIAATAIITACGSSTSDIVGEYSVQGKNGLEPTLRIEKADGKLAVQEFHNGNWRAI QGPVNDLTKEQAQALFGRAVSESVSGISTKDFALVHVPSNWSNKDFPTTTGYLLVSMLGPVELHKVK
Sequences:
>Translated_147_residues MTTFCKFDIPAFTATVRKKAKLLLAIAATAIITACGSSTSDIVGEYSVQGKNGLEPTLRIEKADGKLAVQEFHNGNWRAI QGPVNDLTKEQAQALFGRAVSESVSGISTKDFALVHVPSNWSNKDFPTTTGYLLVSMLGPVELHKVK >Mature_146_residues TTFCKFDIPAFTATVRKKAKLLLAIAATAIITACGSSTSDIVGEYSVQGKNGLEPTLRIEKADGKLAVQEFHNGNWRAIQ GPVNDLTKEQAQALFGRAVSESVSGISTKDFALVHVPSNWSNKDFPTTTGYLLVSMLGPVELHKVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15824; Mature: 15693
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFCKFDIPAFTATVRKKAKLLLAIAATAIITACGSSTSDIVGEYSVQGKNGLEPTLRI CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCEEEEECCCCCCCCEEEE EKADGKLAVQEFHNGNWRAIQGPVNDLTKEQAQALFGRAVSESVSGISTKDFALVHVPSN ECCCCEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC WSNKDFPTTTGYLLVSMLGPVELHKVK CCCCCCCCHHHHHHHHHHCCCEEEECC >Mature Secondary Structure TTFCKFDIPAFTATVRKKAKLLLAIAATAIITACGSSTSDIVGEYSVQGKNGLEPTLRI CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCEEEEECCCCCCCCEEEE EKADGKLAVQEFHNGNWRAIQGPVNDLTKEQAQALFGRAVSESVSGISTKDFALVHVPSN ECCCCEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC WSNKDFPTTTGYLLVSMLGPVELHKVK CCCCCCCCHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA