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The map label for this gene is 187928621

Identifier: 187928621

GI number: 187928621

Start: 1630239

End: 1631312

Strand: Direct

Name: 187928621

Synonym: Rpic_1537

Alternate gene names: NA

Gene position: 1630239-1631312 (Clockwise)

Preceding gene: 187928620

Following gene: 187928622

Centisome position: 41.35

GC content: 59.59

Gene sequence:

>1074_bases
ATGAATCTCCAGAAAGCTCTGCAGTGGCTGAAGGGCAATCCTCTGCCATGGAAGCTCCGAAAACGCCTCTATGAACGTGC
GTCAACGCATCTGGCGAACGACGTAACGCTAGAGCGCGTGCTTACCCGGTTCGGGGCCGGCTTGCTACGACGGCGAAAAC
GTCGCGCTGCTGCTGCAATCGATGCCGTGACACAAGGCGTCCGCAACGGCCAGACGCTGGCGGCGGCAATGGACTCGTCG
CTCACCAATCTTGAGCGAACCGTGCTCGACGCTGGTGATCGAGCGGGCAAGCTTCCCGAGGCAATGAAGCTCGTCATCGA
GGTGCGCGAACTGGTGGATCGCATCTTTTGGAAGCTGATCCTCGGCTTCGCGCCGGCGCTTGTCTATGTCTACGCGCTCT
ACAAGGTACTCGGCTTTATCGGTGCCGACGTAGTGCCCGAGTTCGCAGGAATCTTGCCGGCCGAGAAGTGGACCGGATGG
GCACGCGTCCTCTACCTGATGGGCGTGTTTGCACAAAGCGCGGCAATGCCTTTGGCGACGTACGGGCTGCTTACCTATGC
GCTCTGGTGCGCATGGGCGTTACCGAACTGGGCTGGCCGTGGGAGGGCGTTCTTTGATCGATGGGTTTTTCCGTTCCCAC
TCTATCGGGAGATCGCAGGGTTCTCTTGGTTGCTGTCGTTTCTTGCTCTGCAGCGGGCGGGCATCCCTGAAGTGGAATCG
CTGGCCGCACAGGTGCGCACGGCATCGCCATGGTTGGCGTCGCGGCTGCTCGCCATTTCATCCGGCACACGCAATGGCTT
TGATCTTGCAACTTCCATGATGCGGACTGGGCACGACTTCCCTTCCGTGGATCTGATCGATGAGATCGGCGAGTACATGG
GCAAAGCCGACTCGTCGGAAAAGCTGGCGAACGTGGCGCGAGAGAACGCGGCCTATGTCGAGCGAAAGGTGCTTGCGATC
GGCGGTGGCATGGCGTTGACCCTGAGTCTTCTTGTGTACGCAGCCATGTTTGTCATGCAGTTTGGCTCAAACGCGCTTTC
GTCGGCTCTCACGTCGTCGATGAGGCAGATGTAA

Upstream 100 bases:

>100_bases
AATCCATGCTCGGCAATGTCATGGAACGTGTGTTGGCCGGCAGGATCGATCCGCGCGACGCGCAGAAGAACGTGCCCATT
GAGGCGTATCGCGAGGGCGT

Downstream 100 bases:

>100_bases
ATCGTTGGACGTGGTTTTACTTTAGGAGAGGGTGATATGGAACGGATCATTGGGGCGCTCGTGGCGATCGCGCTGGCAAT
CCTCGCAGTGGGCAACACGC

Product: type II secretion system protein

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein; Type IV Pilus Integral Membrane Protein; Integral Membrane Protein; Type II Secretion System F Domain Protein; Transmembrane Protein; PilR Type IV Pilus Biosynthesis Protein; PilR Protein; Xin Coregulated Pilus Biosynthesis Protein TcpE; General Protein Secretion Protein BfpE; Type IV Secretion System Protein PilR; Integral Membrane Protein PilR; Component Of Type II Secretion Apparatus; Type IV Pilus Transmembrane Protein PilR; Type II Secretory Pathway Component PulF; Type IV B Pilus Protein; Type II Secretion System Protein F; Type IV Pilus Biogenesis Protein PilR; PilR-Like Integral Membrane Protein

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNLQKALQWLKGNPLPWKLRKRLYERASTHLANDVTLERVLTRFGAGLLRRRKRRAAAAIDAVTQGVRNGQTLAAAMDSS
LTNLERTVLDAGDRAGKLPEAMKLVIEVRELVDRIFWKLILGFAPALVYVYALYKVLGFIGADVVPEFAGILPAEKWTGW
ARVLYLMGVFAQSAAMPLATYGLLTYALWCAWALPNWAGRGRAFFDRWVFPFPLYREIAGFSWLLSFLALQRAGIPEVES
LAAQVRTASPWLASRLLAISSGTRNGFDLATSMMRTGHDFPSVDLIDEIGEYMGKADSSEKLANVARENAAYVERKVLAI
GGGMALTLSLLVYAAMFVMQFGSNALSSALTSSMRQM

Sequences:

>Translated_357_residues
MNLQKALQWLKGNPLPWKLRKRLYERASTHLANDVTLERVLTRFGAGLLRRRKRRAAAAIDAVTQGVRNGQTLAAAMDSS
LTNLERTVLDAGDRAGKLPEAMKLVIEVRELVDRIFWKLILGFAPALVYVYALYKVLGFIGADVVPEFAGILPAEKWTGW
ARVLYLMGVFAQSAAMPLATYGLLTYALWCAWALPNWAGRGRAFFDRWVFPFPLYREIAGFSWLLSFLALQRAGIPEVES
LAAQVRTASPWLASRLLAISSGTRNGFDLATSMMRTGHDFPSVDLIDEIGEYMGKADSSEKLANVARENAAYVERKVLAI
GGGMALTLSLLVYAAMFVMQFGSNALSSALTSSMRQM
>Mature_357_residues
MNLQKALQWLKGNPLPWKLRKRLYERASTHLANDVTLERVLTRFGAGLLRRRKRRAAAAIDAVTQGVRNGQTLAAAMDSS
LTNLERTVLDAGDRAGKLPEAMKLVIEVRELVDRIFWKLILGFAPALVYVYALYKVLGFIGADVVPEFAGILPAEKWTGW
ARVLYLMGVFAQSAAMPLATYGLLTYALWCAWALPNWAGRGRAFFDRWVFPFPLYREIAGFSWLLSFLALQRAGIPEVES
LAAQVRTASPWLASRLLAISSGTRNGFDLATSMMRTGHDFPSVDLIDEIGEYMGKADSSEKLANVARENAAYVERKVLAI
GGGMALTLSLLVYAAMFVMQFGSNALSSALTSSMRQM

Specific function: Unknown

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39465; Mature: 39465

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQKALQWLKGNPLPWKLRKRLYERASTHLANDVTLERVLTRFGAGLLRRRKRRAAAAI
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAVTQGVRNGQTLAAAMDSSLTNLERTVLDAGDRAGKLPEAMKLVIEVRELVDRIFWKLI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LGFAPALVYVYALYKVLGFIGADVVPEFAGILPAEKWTGWARVLYLMGVFAQSAAMPLAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
YGLLTYALWCAWALPNWAGRGRAFFDRWVFPFPLYREIAGFSWLLSFLALQRAGIPEVES
HHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LAAQVRTASPWLASRLLAISSGTRNGFDLATSMMRTGHDFPSVDLIDEIGEYMGKADSSE
HHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHH
KLANVARENAAYVERKVLAIGGGMALTLSLLVYAAMFVMQFGSNALSSALTSSMRQM
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLQKALQWLKGNPLPWKLRKRLYERASTHLANDVTLERVLTRFGAGLLRRRKRRAAAAI
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAVTQGVRNGQTLAAAMDSSLTNLERTVLDAGDRAGKLPEAMKLVIEVRELVDRIFWKLI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LGFAPALVYVYALYKVLGFIGADVVPEFAGILPAEKWTGWARVLYLMGVFAQSAAMPLAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
YGLLTYALWCAWALPNWAGRGRAFFDRWVFPFPLYREIAGFSWLLSFLALQRAGIPEVES
HHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LAAQVRTASPWLASRLLAISSGTRNGFDLATSMMRTGHDFPSVDLIDEIGEYMGKADSSE
HHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHH
KLANVARENAAYVERKVLAIGGGMALTLSLLVYAAMFVMQFGSNALSSALTSSMRQM
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA