| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928588
Identifier: 187928588
GI number: 187928588
Start: 1595524
End: 1596378
Strand: Reverse
Name: 187928588
Synonym: Rpic_1504
Alternate gene names: NA
Gene position: 1596378-1595524 (Counterclockwise)
Preceding gene: 187928589
Following gene: 187928587
Centisome position: 40.49
GC content: 58.36
Gene sequence:
>855_bases ATGACTGCATCAGTGCTGAACCATGATCTTTCGGGGGACTTTGAGCGCCTGCTCACGTTGGTGATGCAGCTCGTTGAGTC CCAGGCCGGGCAGCAGATCCCGGTGGACCAGCTTTGGATGAACGATGCGCAAGTGCTGGGCAAAAAATTCTGTTACCACG TAGCCTCGCTGCGCCTGATAGCCCAACCGGTCCAAATCGATATTGCCGGGTATGGCGCAGATCTTCACATCGACCACAGT TCCGTGATGATTCTTGCGCGCGCGGCTCTGGAGACCTACCTCACGTTCGCCTACATCTACGGCAGCAAAGATGTGGAGGT CCGACAATTCCGCCATATGATCTGGCGTCGTGCCGGCCTACTGGACCGACAGGCGTATCCGGCACGTGCGCCAGAGCACC AACAGAAGTTGGCCGACGAGAAGACAAGGATCGATCAACTCCAGATCGAGATCGAAGCCCACGGCGTCTGGCAGCAGTAT TCCGAACCGATGCGTAAAAAGGTTCTGAAGGGCGAATGGCGCGCCGGCCAGTCTTGGATCGACACTGGCATCGCCGCCGG TTTCCACCCCGTCTATATCCGCCAAATCTACAGCTTCCTCTGCGGCTACGCGCACTCGAGCTGGCTCAGCATTCTGCAGA TTCGCGATGCACAAGCGCTTTGCGACCAGGAGGCGATGGCCGCTAGGTTCGTAAGCGTGGCCCTCGTTTTCATGAGCTTC TTTGCAACGAGCTACGTTGCCTTGTTTCCGCAGGCTGAGGCGGTCCTGGCCAGCAACACCGAAGCGGCCAACCTTGCCCA GCGGTGGCATCTGACCGCTGATCGCCAGTCTGCCCTGTATGGCACAACGAACTGA
Upstream 100 bases:
>100_bases AGCAGGATCGGTGTTGGCAGGCCGGCGCGTAAGGGTTGCAGGCTGAGGCCACACTCGCACGTTACAGGAGCCGCCTTCGG GCGGCTTTTTCATATCTGCA
Downstream 100 bases:
>100_bases GCTTGCCGATTCGCCTATGCCCGCCGACCAAAACCCACCTGCTAAGCAATTCCCCCGGAACGAACGAGTGCCGGTGGCGC GCGCGGTTGCCACGACGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTASVLNHDLSGDFERLLTLVMQLVESQAGQQIPVDQLWMNDAQVLGKKFCYHVASLRLIAQPVQIDIAGYGADLHIDHS SVMILARAALETYLTFAYIYGSKDVEVRQFRHMIWRRAGLLDRQAYPARAPEHQQKLADEKTRIDQLQIEIEAHGVWQQY SEPMRKKVLKGEWRAGQSWIDTGIAAGFHPVYIRQIYSFLCGYAHSSWLSILQIRDAQALCDQEAMAARFVSVALVFMSF FATSYVALFPQAEAVLASNTEAANLAQRWHLTADRQSALYGTTN
Sequences:
>Translated_284_residues MTASVLNHDLSGDFERLLTLVMQLVESQAGQQIPVDQLWMNDAQVLGKKFCYHVASLRLIAQPVQIDIAGYGADLHIDHS SVMILARAALETYLTFAYIYGSKDVEVRQFRHMIWRRAGLLDRQAYPARAPEHQQKLADEKTRIDQLQIEIEAHGVWQQY SEPMRKKVLKGEWRAGQSWIDTGIAAGFHPVYIRQIYSFLCGYAHSSWLSILQIRDAQALCDQEAMAARFVSVALVFMSF FATSYVALFPQAEAVLASNTEAANLAQRWHLTADRQSALYGTTN >Mature_283_residues TASVLNHDLSGDFERLLTLVMQLVESQAGQQIPVDQLWMNDAQVLGKKFCYHVASLRLIAQPVQIDIAGYGADLHIDHSS VMILARAALETYLTFAYIYGSKDVEVRQFRHMIWRRAGLLDRQAYPARAPEHQQKLADEKTRIDQLQIEIEAHGVWQQYS EPMRKKVLKGEWRAGQSWIDTGIAAGFHPVYIRQIYSFLCGYAHSSWLSILQIRDAQALCDQEAMAARFVSVALVFMSFF ATSYVALFPQAEAVLASNTEAANLAQRWHLTADRQSALYGTTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32138; Mature: 32007
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASVLNHDLSGDFERLLTLVMQLVESQAGQQIPVDQLWMNDAQVLGKKFCYHVASLRLI CCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AQPVQIDIAGYGADLHIDHSSVMILARAALETYLTFAYIYGSKDVEVRQFRHMIWRRAGL HCCEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCC LDRQAYPARAPEHQQKLADEKTRIDQLQIEIEAHGVWQQYSEPMRKKVLKGEWRAGQSWI CCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHCCCCCCCHHHH DTGIAAGFHPVYIRQIYSFLCGYAHSSWLSILQIRDAQALCDQEAMAARFVSVALVFMSF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FATSYVALFPQAEAVLASNTEAANLAQRWHLTADRQSALYGTTN HHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TASVLNHDLSGDFERLLTLVMQLVESQAGQQIPVDQLWMNDAQVLGKKFCYHVASLRLI CCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AQPVQIDIAGYGADLHIDHSSVMILARAALETYLTFAYIYGSKDVEVRQFRHMIWRRAGL HCCEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCC LDRQAYPARAPEHQQKLADEKTRIDQLQIEIEAHGVWQQYSEPMRKKVLKGEWRAGQSWI CCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHCCCCCCCHHHH DTGIAAGFHPVYIRQIYSFLCGYAHSSWLSILQIRDAQALCDQEAMAARFVSVALVFMSF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FATSYVALFPQAEAVLASNTEAANLAQRWHLTADRQSALYGTTN HHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA