| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928586
Identifier: 187928586
GI number: 187928586
Start: 1591993
End: 1592718
Strand: Reverse
Name: 187928586
Synonym: Rpic_1502
Alternate gene names: NA
Gene position: 1592718-1591993 (Counterclockwise)
Preceding gene: 187928587
Following gene: 187928580
Centisome position: 40.4
GC content: 59.09
Gene sequence:
>726_bases ATGAAGTTCTACCATTTCACGTCCGTCTCGTACGCCGAAACGATCCTCTCGATGGGGATTTCGCGTGGCCACGTGAAGCA TGGTGACGGAAGCATTCGCAACTCAGTGGTCTGGCTGACGACGGATCCCGATGCTGATGGTCACGGCCTGACGACAGGCG ACAAAACGTTGACCGCGAGAGACATGGAGTATCTGACCCGCGTCGATGGGGTCGCACCCAAGAATGGCATCGTCATGAAC AAAACCCGAGTGCGCCTGACGGTGGAGATGTCGGCCGACACAGCCACTCTGATGCCCTTTGTCGAGTACTACGCGCGTCG TGGCGAAAAGCCCGATGAAGCCAAGCTTATGGGCCTTTCCGCATACGTCGAAAATCCTTGGCGTCTGCCTCTCACGAGAC GGCGGCATTTATTGAAATCGACCACAACCAAAGAAGGCACGTGGTGGCTCTCGTTTGCGCCGATCACCGCCTCCGAGATT ACGCGGGTCGAATACAACAGCCCGGCTGGGTTCGTAGACTACGACTTTGAAGCGCATGGCCGGCAGCACTTCCATGACGC AGGCTTTGTGGTGCCCAGCGCCGCCACGCTACAGTCGCTGCACCCCCTGGTGCCCTGCGACTATCCCTTCGAGAAGGCGA AGGCGTTCGCTTTCTGCTTGGACACGAAGCGCGTTCGACGTGGCGACTGGTGCGCCGGCGTTCGGAATGAGCCACCCGAA CGCTGA
Upstream 100 bases:
>100_bases GACTAATTGAATGAAGAAAGCTTGTCGGCACCCGTTTGACACCGCATTCGGTCAATCGCGTTGCTGAACTATCAACACAC ACAACGATGAAGGAACGCGG
Downstream 100 bases:
>100_bases GGCCTTGGCCAAGCGGGTACGCGACCACTCGGACGAGTTGCTCGACTGCTGGGCCCGCGCTGTTGACGTGTACTACAGCT ACTACCCGAAAACAGGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MKFYHFTSVSYAETILSMGISRGHVKHGDGSIRNSVVWLTTDPDADGHGLTTGDKTLTARDMEYLTRVDGVAPKNGIVMN KTRVRLTVEMSADTATLMPFVEYYARRGEKPDEAKLMGLSAYVENPWRLPLTRRRHLLKSTTTKEGTWWLSFAPITASEI TRVEYNSPAGFVDYDFEAHGRQHFHDAGFVVPSAATLQSLHPLVPCDYPFEKAKAFAFCLDTKRVRRGDWCAGVRNEPPE R
Sequences:
>Translated_241_residues MKFYHFTSVSYAETILSMGISRGHVKHGDGSIRNSVVWLTTDPDADGHGLTTGDKTLTARDMEYLTRVDGVAPKNGIVMN KTRVRLTVEMSADTATLMPFVEYYARRGEKPDEAKLMGLSAYVENPWRLPLTRRRHLLKSTTTKEGTWWLSFAPITASEI TRVEYNSPAGFVDYDFEAHGRQHFHDAGFVVPSAATLQSLHPLVPCDYPFEKAKAFAFCLDTKRVRRGDWCAGVRNEPPE R >Mature_241_residues MKFYHFTSVSYAETILSMGISRGHVKHGDGSIRNSVVWLTTDPDADGHGLTTGDKTLTARDMEYLTRVDGVAPKNGIVMN KTRVRLTVEMSADTATLMPFVEYYARRGEKPDEAKLMGLSAYVENPWRLPLTRRRHLLKSTTTKEGTWWLSFAPITASEI TRVEYNSPAGFVDYDFEAHGRQHFHDAGFVVPSAATLQSLHPLVPCDYPFEKAKAFAFCLDTKRVRRGDWCAGVRNEPPE R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27174; Mature: 27174
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFYHFTSVSYAETILSMGISRGHVKHGDGSIRNSVVWLTTDPDADGHGLTTGDKTLTAR CEEEEECCHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEHH DMEYLTRVDGVAPKNGIVMNKTRVRLTVEMSADTATLMPFVEYYARRGEKPDEAKLMGLS HHHHHHHHCCCCCCCCEEEECEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHEEEEH AYVENPWRLPLTRRRHLLKSTTTKEGTWWLSFAPITASEITRVEYNSPAGFVDYDFEAHG HHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHEEEEEECCCCCEEECCCCCCC RQHFHDAGFVVPSAATLQSLHPLVPCDYPFEKAKAFAFCLDTKRVRRGDWCAGVRNEPPE CCHHCCCCEECCCHHHHHHCCCCCCCCCCHHHHHEEEEEECHHHHCCCCCCCCCCCCCCC R C >Mature Secondary Structure MKFYHFTSVSYAETILSMGISRGHVKHGDGSIRNSVVWLTTDPDADGHGLTTGDKTLTAR CEEEEECCHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEHH DMEYLTRVDGVAPKNGIVMNKTRVRLTVEMSADTATLMPFVEYYARRGEKPDEAKLMGLS HHHHHHHHCCCCCCCCEEEECEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHEEEEH AYVENPWRLPLTRRRHLLKSTTTKEGTWWLSFAPITASEITRVEYNSPAGFVDYDFEAHG HHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHEEEEEECCCCCEEECCCCCCC RQHFHDAGFVVPSAATLQSLHPLVPCDYPFEKAKAFAFCLDTKRVRRGDWCAGVRNEPPE CCHHCCCCEECCCHHHHHHCCCCCCCCCCHHHHHEEEEEECHHHHCCCCCCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA