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The map label for this gene is copB [H]

Identifier: 187928566

GI number: 187928566

Start: 1574022

End: 1574840

Strand: Direct

Name: copB [H]

Synonym: Rpic_1482

Alternate gene names: 187928566

Gene position: 1574022-1574840 (Clockwise)

Preceding gene: 187928565

Following gene: 187928567

Centisome position: 39.92

GC content: 60.2

Gene sequence:

>819_bases
ATGCCGCAGACGCCACACGGCACACCGTCTCAGGCCCATGGGCAAGAAGCGCAGGTACTTGCAACACAAAAGCCCGACTT
ACCTTCCCAAGAGGAAGGCGTCAATGTGATCACCCCCAGTGACGAACCCCGCGTGCCAATGCAGAATCCCAGCCGAGGCA
TCGCCGTGCCGGGCGACACCATGGTCGACAACGATGTCTATCATCAGTTTCTGCTCGATCGGCTCGAGACGGTACGCACT
CGCGACGCGACGGGATGGGCATGGGACATGCAAGGCTGGTTCGGTAAGGATCTTGACCGACTATGGTTGAAGACCGAGGG
CGAGCGACTGTTCGGTCAAACCGCAGACGCCAAAGTTGAAGCGTTGTGGGGTCATGCATTTGCCACATTTTGGGATTGGC
AGGCAGGCGTTCGCCGCGACTTCGGTGGTGGACCAACACGTACGTGGGCTGCCTTTGGAGTGCAAGGGCTCGCGCCATAC
TCGTTCGATGTCGAAGCGACCCTGTACGTCAGTAATGGCGGGCGTCTTGCGGCCCGTGTGCGTGCTACCTACGATGTCCG
CCTCTCGCAGCGAAGTGCCCTCACTCCCGAAATCGAAGCCAACGTCTACTCGAAGACCGACCAGGCGCGCGAGATTGGCC
GCGGGCTGGCCGATGTTCGCCTCGGCTTGCGACTGCGATACGAACTTCGGCGCGACTTCGCTCCGTACATTGGCGTGGTT
TGGAGCAGGAAACTGGGAAGGAGCGCAGAGTTTGCGCGAGCGGCGGGGCAAGACGCCGTAAACAAGCAGATCGTGGCTGG
AATACGATGGTGGTTTTGA

Upstream 100 bases:

>100_bases
TGATCGGCTGACGGAATTTTCGGCGGTTCCGGCTTAGAACCCCTTATTGCTCACCGTGCGGCTTGCAGGCGCCCACACGT
CTGAGGCGCCCACGCCAGGC

Downstream 100 bases:

>100_bases
ACCAGGAGCCTGTCAGGCTGCGCTCTGGGCGCTTTGCTATATAGCTCAGCATCGCGGTTTCCCGATCGCGCCGTCGGCAT
GAACGTCTTACCAAGACGTA

Product: copper resistance B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MPQTPHGTPSQAHGQEAQVLATQKPDLPSQEEGVNVITPSDEPRVPMQNPSRGIAVPGDTMVDNDVYHQFLLDRLETVRT
RDATGWAWDMQGWFGKDLDRLWLKTEGERLFGQTADAKVEALWGHAFATFWDWQAGVRRDFGGGPTRTWAAFGVQGLAPY
SFDVEATLYVSNGGRLAARVRATYDVRLSQRSALTPEIEANVYSKTDQAREIGRGLADVRLGLRLRYELRRDFAPYIGVV
WSRKLGRSAEFARAAGQDAVNKQIVAGIRWWF

Sequences:

>Translated_272_residues
MPQTPHGTPSQAHGQEAQVLATQKPDLPSQEEGVNVITPSDEPRVPMQNPSRGIAVPGDTMVDNDVYHQFLLDRLETVRT
RDATGWAWDMQGWFGKDLDRLWLKTEGERLFGQTADAKVEALWGHAFATFWDWQAGVRRDFGGGPTRTWAAFGVQGLAPY
SFDVEATLYVSNGGRLAARVRATYDVRLSQRSALTPEIEANVYSKTDQAREIGRGLADVRLGLRLRYELRRDFAPYIGVV
WSRKLGRSAEFARAAGQDAVNKQIVAGIRWWF
>Mature_271_residues
PQTPHGTPSQAHGQEAQVLATQKPDLPSQEEGVNVITPSDEPRVPMQNPSRGIAVPGDTMVDNDVYHQFLLDRLETVRTR
DATGWAWDMQGWFGKDLDRLWLKTEGERLFGQTADAKVEALWGHAFATFWDWQAGVRRDFGGGPTRTWAAFGVQGLAPYS
FDVEATLYVSNGGRLAARVRATYDVRLSQRSALTPEIEANVYSKTDQAREIGRGLADVRLGLRLRYELRRDFAPYIGVVW
SRKLGRSAEFARAAGQDAVNKQIVAGIRWWF

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 30490; Mature: 30359

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQTPHGTPSQAHGQEAQVLATQKPDLPSQEEGVNVITPSDEPRVPMQNPSRGIAVPGDT
CCCCCCCCCCCCCCCCEEEEEECCCCCCCHHCCCEEECCCCCCCCCCCCCCCCEECCCCC
MVDNDVYHQFLLDRLETVRTRDATGWAWDMQGWFGKDLDRLWLKTEGERLFGQTADAKVE
CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHCCCCHHHCCCCCCHHH
ALWGHAFATFWDWQAGVRRDFGGGPTRTWAAFGVQGLAPYSFDVEATLYVSNGGRLAARV
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEECCEEEEEEECCCEEEEEE
RATYDVRLSQRSALTPEIEANVYSKTDQAREIGRGLADVRLGLRLRYELRRDFAPYIGVV
EEEEEEEECCCCCCCCCCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
WSRKLGRSAEFARAAGQDAVNKQIVAGIRWWF
HHHHCCCCHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PQTPHGTPSQAHGQEAQVLATQKPDLPSQEEGVNVITPSDEPRVPMQNPSRGIAVPGDT
CCCCCCCCCCCCCCCEEEEEECCCCCCCHHCCCEEECCCCCCCCCCCCCCCCEECCCCC
MVDNDVYHQFLLDRLETVRTRDATGWAWDMQGWFGKDLDRLWLKTEGERLFGQTADAKVE
CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHCCCCHHHCCCCCCHHH
ALWGHAFATFWDWQAGVRRDFGGGPTRTWAAFGVQGLAPYSFDVEATLYVSNGGRLAARV
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEECCEEEEEEECCCEEEEEE
RATYDVRLSQRSALTPEIEANVYSKTDQAREIGRGLADVRLGLRLRYELRRDFAPYIGVV
EEEEEEEECCCCCCCCCCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
WSRKLGRSAEFARAAGQDAVNKQIVAGIRWWF
HHHHCCCCHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]