| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is gltI [H]
Identifier: 187928559
GI number: 187928559
Start: 1566489
End: 1567382
Strand: Reverse
Name: gltI [H]
Synonym: Rpic_1475
Alternate gene names: 187928559
Gene position: 1567382-1566489 (Counterclockwise)
Preceding gene: 187928560
Following gene: 187928557
Centisome position: 39.76
GC content: 61.3
Gene sequence:
>894_bases ATGAACACGAGACACACACTCGCTTCCACGCTTGTCGTGGCGGGTCTAACGGTGGCGGCGCAGGGCATCCACGCCCAGAC GCTGGAAAAGGTCGCTGCAGCAGGCAAGATCACGGTTGGTTACCGTGAAGCGGCGGTTCCGTTCAGCTACTTGCTGGCCC CGAACAAGGCGGTCGGATTTTCCGTCGACCTGACGCAAGCCATCGTCGACGATGTGCGCGCCCGGCTGAAGAAGCCGTCT CTGCAGGTCGACGCGATTCCGGTGACCGGCACGAATCGGATCCCGCTGCTGGTGAACGGCACCTACGACCTCGAATGCGG ATCGACCACCAACACCAGCGCGCGCGGCAAGGACGTGGCCTTCTCGATCAATTTCTTCTACGCGGGAACGCGCCTCTTGA CCAAGCGCGATTCGGGCATCAAAAACTACCCGGACCTGGCCGGCAAGACCGTCGCGAGCACGGCAGGCAGCACGAACGAA AAGGTGCTCAAGAAGTTTGCCGTAGAACACAACATCGACGTCCAGATCATTTCCGGCAAGGACTACGCAGACGCGTTGAA GCTCGTCGAAACCGGCCGAGCGACGGCATTGGCGCTCGATGACGTGCTGCTGTACGGCCTGCGTGCCAATTCTGCAAATC CCGCTGCGCTGGAAGTCGTGGCGGAAACCCTGCAGGTCGAGCCGTACGCCTGCATGGTTCGCAAGGACGACCCCGCCTTC AAGCGGCTCGTGGATGCGACCATCACACGGCTCATGAAATCCGGCGAATTCACCGCGCTGTACAAGAAATGGTTCGAGTC GCCCATCCCGCCGGCCGGTGCAAACCTCGACATGCCGATGAGCGATGCACTGCGCGCCAACCTGAAAAAGCGTAGCGATA AGCCGGCGCAGTGA
Upstream 100 bases:
>100_bases TGCATCAATGGCAAGAACGGGGTTGCGCCTAGATTCCGTAGGGAGGGCGCTGTAGCTGCCAAAAGCCTACAGAGTGCGGG ACGCATCCATGGAGACGCAA
Downstream 100 bases:
>100_bases CCGCGCTCACTATCGCCCGCTCGATGCCGTCTCCAGGTGCGTCGCCAACAGGTTTGCCATCCAGTTCATGAATACTTGCA CCCGAACCGGCAGATTCCGC
Product: family 3 extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MNTRHTLASTLVVAGLTVAAQGIHAQTLEKVAAAGKITVGYREAAVPFSYLLAPNKAVGFSVDLTQAIVDDVRARLKKPS LQVDAIPVTGTNRIPLLVNGTYDLECGSTTNTSARGKDVAFSINFFYAGTRLLTKRDSGIKNYPDLAGKTVASTAGSTNE KVLKKFAVEHNIDVQIISGKDYADALKLVETGRATALALDDVLLYGLRANSANPAALEVVAETLQVEPYACMVRKDDPAF KRLVDATITRLMKSGEFTALYKKWFESPIPPAGANLDMPMSDALRANLKKRSDKPAQ
Sequences:
>Translated_297_residues MNTRHTLASTLVVAGLTVAAQGIHAQTLEKVAAAGKITVGYREAAVPFSYLLAPNKAVGFSVDLTQAIVDDVRARLKKPS LQVDAIPVTGTNRIPLLVNGTYDLECGSTTNTSARGKDVAFSINFFYAGTRLLTKRDSGIKNYPDLAGKTVASTAGSTNE KVLKKFAVEHNIDVQIISGKDYADALKLVETGRATALALDDVLLYGLRANSANPAALEVVAETLQVEPYACMVRKDDPAF KRLVDATITRLMKSGEFTALYKKWFESPIPPAGANLDMPMSDALRANLKKRSDKPAQ >Mature_297_residues MNTRHTLASTLVVAGLTVAAQGIHAQTLEKVAAAGKITVGYREAAVPFSYLLAPNKAVGFSVDLTQAIVDDVRARLKKPS LQVDAIPVTGTNRIPLLVNGTYDLECGSTTNTSARGKDVAFSINFFYAGTRLLTKRDSGIKNYPDLAGKTVASTAGSTNE KVLKKFAVEHNIDVQIISGKDYADALKLVETGRATALALDDVLLYGLRANSANPAALEVVAETLQVEPYACMVRKDDPAF KRLVDATITRLMKSGEFTALYKKWFESPIPPAGANLDMPMSDALRANLKKRSDKPAQ
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=268, Percent_Identity=47.7611940298507, Blast_Score=270, Evalue=6e-74, Organism=Escherichia coli, GI1787031, Length=245, Percent_Identity=27.3469387755102, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787085, Length=236, Percent_Identity=24.1525423728814, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788228, Length=268, Percent_Identity=25.7462686567164, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 31886; Mature: 31886
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTRHTLASTLVVAGLTVAAQGIHAQTLEKVAAAGKITVGYREAAVPFSYLLAPNKAVGF CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCHHHHCCCCEEECCCCCCEE SVDLTQAIVDDVRARLKKPSLQVDAIPVTGTNRIPLLVNGTYDLECGSTTNTSARGKDVA EHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECEEEEECCCCCCCCCCCCEEE FSINFFYAGTRLLTKRDSGIKNYPDLAGKTVASTAGSTNEKVLKKFAVEHNIDVQIISGK EEEEEEEECEEEEEECCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCEEEEECCC DYADALKLVETGRATALALDDVLLYGLRANSANPAALEVVAETLQVEPYACMVRKDDPAF CHHHHHHHHHCCCCCEEEHHHHHHEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCHHH KRLVDATITRLMKSGEFTALYKKWFESPIPPAGANLDMPMSDALRANLKKRSDKPAQ HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNTRHTLASTLVVAGLTVAAQGIHAQTLEKVAAAGKITVGYREAAVPFSYLLAPNKAVGF CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCHHHHCCCCEEECCCCCCEE SVDLTQAIVDDVRARLKKPSLQVDAIPVTGTNRIPLLVNGTYDLECGSTTNTSARGKDVA EHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECEEEEECCCCCCCCCCCCEEE FSINFFYAGTRLLTKRDSGIKNYPDLAGKTVASTAGSTNEKVLKKFAVEHNIDVQIISGK EEEEEEEECEEEEEECCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCEEEEECCC DYADALKLVETGRATALALDDVLLYGLRANSANPAALEVVAETLQVEPYACMVRKDDPAF CHHHHHHHHHCCCCCEEEHHHHHHEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCHHH KRLVDATITRLMKSGEFTALYKKWFESPIPPAGANLDMPMSDALRANLKKRSDKPAQ HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]