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The map label for this gene is phnV [H]

Identifier: 187928502

GI number: 187928502

Start: 1505908

End: 1506705

Strand: Reverse

Name: phnV [H]

Synonym: Rpic_1416

Alternate gene names: 187928502

Gene position: 1506705-1505908 (Counterclockwise)

Preceding gene: 187928503

Following gene: 187928501

Centisome position: 38.22

GC content: 64.29

Gene sequence:

>798_bases
ATGAAACGCGTGCTTTCTCTTTCGCAGTGGCTCATCACGCTGCTGCTGTGCCTGTTCCTGATCGTGCCGGTCGTGTTGTC
GATGGCCGTGGGCCTGACGCGCAACTACATCCGCGGGTTCAAGAGCGGTTGGACGCTGGATTGGGTCTTCCAAGTCTGGG
AGATGTATCACGCGTCGATCTGGATGTCGCTGCTGGTGGCGCTGTGCACGCTGGCGATCGTGCTCGCGGCCGGCGTGCCG
GCAGGCTATGTACTGGCGCGGCGCCAGAGCCGTGCGAGCCGCCTGATCGAAGAATTCCTGACGCTGCCCGTGGCGCTGCC
CGGCTTGGCGACGGCGCTGGGCTTGATCGTGGCGTACGGCGGCTTTGGCGGCTTTCGCGAGAGCCTTTGGTTCATCGTCG
TCGGCCATGTGGTGTTTACGCTGCCGTTCATGGTGCGCTCGGTTGCCGCCGTGGCGGCAGGCCAGAACCTGAAGACGCTG
GAAGAGGGCGCTGCCAGCCTGGGCGCGTCGTTCTGGCAGCGCTTTCGCACCATCGTGCTGCCCAACGTGCAACCCGGCAT
CCTGGCCGGCGCGCTGACGGTGGTGACGCTCTCGGTGGGCGAGTTCAACCTCACCTGGATGCTGCACACGCCAGAAACCA
AAACCCTGCCGGTCGGCCTGGCCGACACCTATGCGTCGATGCGGCTGGAAATTGCCAGCGCCTACACGCTGATCTTCTTC
GTCATGATCGTGCCGCTGCTGGTGCTGATGCAGCGCTTTGGCGGCCTGCGGGTGAACAACGGAAAGGCTTCCCGATGA

Upstream 100 bases:

>100_bases
TTGCGATGGCGGCAGCGCTGTCGGTGGTGCTGGGCGTGGTGACGTGGCTGGTGCTGGCGATTGCGCGCACCGCGAGTGGT
AGCCCAAGTGGGGCCGCAGC

Downstream 100 bases:

>100_bases
GTACCGAATCCCTACATCTCGCGCCCGTGCCCATCCGGCTGCGTGGCTGCGGAAAACACTTCGGCGGCCAGCGCGTGCTG
GAGTCGATGGACCTCGACAT

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKRVLSLSQWLITLLLCLFLIVPVVLSMAVGLTRNYIRGFKSGWTLDWVFQVWEMYHASIWMSLLVALCTLAIVLAAGVP
AGYVLARRQSRASRLIEEFLTLPVALPGLATALGLIVAYGGFGGFRESLWFIVVGHVVFTLPFMVRSVAAVAAGQNLKTL
EEGAASLGASFWQRFRTIVLPNVQPGILAGALTVVTLSVGEFNLTWMLHTPETKTLPVGLADTYASMRLEIASAYTLIFF
VMIVPLLVLMQRFGGLRVNNGKASR

Sequences:

>Translated_265_residues
MKRVLSLSQWLITLLLCLFLIVPVVLSMAVGLTRNYIRGFKSGWTLDWVFQVWEMYHASIWMSLLVALCTLAIVLAAGVP
AGYVLARRQSRASRLIEEFLTLPVALPGLATALGLIVAYGGFGGFRESLWFIVVGHVVFTLPFMVRSVAAVAAGQNLKTL
EEGAASLGASFWQRFRTIVLPNVQPGILAGALTVVTLSVGEFNLTWMLHTPETKTLPVGLADTYASMRLEIASAYTLIFF
VMIVPLLVLMQRFGGLRVNNGKASR
>Mature_265_residues
MKRVLSLSQWLITLLLCLFLIVPVVLSMAVGLTRNYIRGFKSGWTLDWVFQVWEMYHASIWMSLLVALCTLAIVLAAGVP
AGYVLARRQSRASRLIEEFLTLPVALPGLATALGLIVAYGGFGGFRESLWFIVVGHVVFTLPFMVRSVAAVAAGQNLKTL
EEGAASLGASFWQRFRTIVLPNVQPGILAGALTVVTLSVGEFNLTWMLHTPETKTLPVGLADTYASMRLEIASAYTLIFF
VMIVPLLVLMQRFGGLRVNNGKASR

Specific function: Probably part of the phnSTUV complex (TC 3.A.1.11.5) involved in 2-aminoethylphosphonate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87082099, Length=160, Percent_Identity=29.375, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017661
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29019; Mature: 29019

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVLSLSQWLITLLLCLFLIVPVVLSMAVGLTRNYIRGFKSGWTLDWVFQVWEMYHASI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
WMSLLVALCTLAIVLAAGVPAGYVLARRQSRASRLIEEFLTLPVALPGLATALGLIVAYG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFGGFRESLWFIVVGHVVFTLPFMVRSVAAVAAGQNLKTLEEGAASLGASFWQRFRTIVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PNVQPGILAGALTVVTLSVGEFNLTWMLHTPETKTLPVGLADTYASMRLEIASAYTLIFF
CCCCCHHHHHHHHHHHEECCCEEEEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHH
VMIVPLLVLMQRFGGLRVNNGKASR
HHHHHHHHHHHHHCCEEECCCCCCC
>Mature Secondary Structure
MKRVLSLSQWLITLLLCLFLIVPVVLSMAVGLTRNYIRGFKSGWTLDWVFQVWEMYHASI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
WMSLLVALCTLAIVLAAGVPAGYVLARRQSRASRLIEEFLTLPVALPGLATALGLIVAYG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFGGFRESLWFIVVGHVVFTLPFMVRSVAAVAAGQNLKTLEEGAASLGASFWQRFRTIVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PNVQPGILAGALTVVTLSVGEFNLTWMLHTPETKTLPVGLADTYASMRLEIASAYTLIFF
CCCCCHHHHHHHHHHHEECCCEEEEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHH
VMIVPLLVLMQRFGGLRVNNGKASR
HHHHHHHHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA