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The map label for this gene is nahD [H]

Identifier: 187928414

GI number: 187928414

Start: 1419636

End: 1420334

Strand: Reverse

Name: nahD [H]

Synonym: Rpic_1326

Alternate gene names: 187928414

Gene position: 1420334-1419636 (Counterclockwise)

Preceding gene: 187928415

Following gene: 187928413

Centisome position: 36.03

GC content: 65.38

Gene sequence:

>699_bases
ATGGACACCCTCGCCCGACCGCAGACAGCCCCCCGGCCTGCCGCATACAACGCCACGTGGGAAGCGCTCGTCCCCGCGCC
CACCGTCGAGTTCTGGTTCGACTTCGCGAGCAATTACAGCTACCCGAGTGTGATGCGCATCGAGGCCGCCGCGGTGCAAC
ACGGTGTGCGCGTGGTGTGGAAGCCGTTCCTGCTCGGGCCGAGCTTCCAGTCGCTCGGCTGGGCCAGTTCGCCGTTTGTG
CTGCAACGGGCCAAAGGGCACTACGTCTGGCAAGACATGGCGCGCGAATGCGCTAAACACGGTTTGCCGTGGACGCAGCC
GAGCACGTTTCCACGTGCGTCCGTCCTGCCGCTGCGTGTGGCGCTGCTCGGTGCAGACGCGCCGTGGGTCGGTGCCTTCT
GCCAACGCATCATGCTGCGCAATTTCGCGCAGGACCGCGACATCCACACGCCTGACGCCGTGGCAGAAGAACTGACGGCG
CTCGGCTTGCCGGTCGACGCCATCCTCGCTCAGGCACAGTCCGACGCAAGCAGGCTAGGCCTGCGCGAGCAAACGCACGC
CGCGCAGATTCGTGGCATCTTTGGCGCTCCCACGTTCTTTGTCGGCGACGCGATGTTCTGGGGCAACGACCGCCTGGACG
ATGCGCTCGCCTGCGCCGTAGCATTGCAGTCCAATCCTGGTTCATATCACAGCGGATAA

Upstream 100 bases:

>100_bases
CTACGCATGCGTCCGGCGCATCCGAACTTGCATGAAAGGCGTTTGAGCCCACAGGGCGGTCCACGTGTAATGCCGCCAAC
GACACCCCGTTGGAGGCCGC

Downstream 100 bases:

>100_bases
CCCATGCCGACCCAGATCGAAAAAGCTCGTGCCTTCCGCGTACTGCACGAACGCAGCGGCACCTTCGTGATCCCCAACCC
GTGGGACCCGGGATCGGCTC

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: HCCA isomerase [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MDTLARPQTAPRPAAYNATWEALVPAPTVEFWFDFASNYSYPSVMRIEAAAVQHGVRVVWKPFLLGPSFQSLGWASSPFV
LQRAKGHYVWQDMARECAKHGLPWTQPSTFPRASVLPLRVALLGADAPWVGAFCQRIMLRNFAQDRDIHTPDAVAEELTA
LGLPVDAILAQAQSDASRLGLREQTHAAQIRGIFGAPTFFVGDAMFWGNDRLDDALACAVALQSNPGSYHSG

Sequences:

>Translated_232_residues
MDTLARPQTAPRPAAYNATWEALVPAPTVEFWFDFASNYSYPSVMRIEAAAVQHGVRVVWKPFLLGPSFQSLGWASSPFV
LQRAKGHYVWQDMARECAKHGLPWTQPSTFPRASVLPLRVALLGADAPWVGAFCQRIMLRNFAQDRDIHTPDAVAEELTA
LGLPVDAILAQAQSDASRLGLREQTHAAQIRGIFGAPTFFVGDAMFWGNDRLDDALACAVALQSNPGSYHSG
>Mature_232_residues
MDTLARPQTAPRPAAYNATWEALVPAPTVEFWFDFASNYSYPSVMRIEAAAVQHGVRVVWKPFLLGPSFQSLGWASSPFV
LQRAKGHYVWQDMARECAKHGLPWTQPSTFPRASVLPLRVALLGADAPWVGAFCQRIMLRNFAQDRDIHTPDAVAEELTA
LGLPVDAILAQAQSDASRLGLREQTHAAQIRGIFGAPTFFVGDAMFWGNDRLDDALACAVALQSNPGSYHSG

Specific function: Catalyzes the isomerization of 2-hydroxychromene-2- carboxylate (HCCA) to trans-O-hydroxybenzylidenepyruvate (THBPA). The reaction is reversible [H]

COG id: COG3917

COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR014440
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 25423; Mature: 25423

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLARPQTAPRPAAYNATWEALVPAPTVEFWFDFASNYSYPSVMRIEAAAVQHGVRVVW
CCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHH
KPFLLGPSFQSLGWASSPFVLQRAKGHYVWQDMARECAKHGLPWTQPSTFPRASVLPLRV
HHHHCCCCHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
ALLGADAPWVGAFCQRIMLRNFAQDRDIHTPDAVAEELTALGLPVDAILAQAQSDASRLG
EEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
LREQTHAAQIRGIFGAPTFFVGDAMFWGNDRLDDALACAVALQSNPGSYHSG
CHHHHHHHHHHHCCCCCHHHHCCEEEECCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDTLARPQTAPRPAAYNATWEALVPAPTVEFWFDFASNYSYPSVMRIEAAAVQHGVRVVW
CCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHH
KPFLLGPSFQSLGWASSPFVLQRAKGHYVWQDMARECAKHGLPWTQPSTFPRASVLPLRV
HHHHCCCCHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
ALLGADAPWVGAFCQRIMLRNFAQDRDIHTPDAVAEELTALGLPVDAILAQAQSDASRLG
EEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
LREQTHAAQIRGIFGAPTFFVGDAMFWGNDRLDDALACAVALQSNPGSYHSG
CHHHHHHHHHHHCCCCCHHHHCCEEEECCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002605; 1447127 [H]