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The map label for this gene is ytfF [H]

Identifier: 187928394

GI number: 187928394

Start: 1400557

End: 1401501

Strand: Reverse

Name: ytfF [H]

Synonym: Rpic_1305

Alternate gene names: 187928394

Gene position: 1401501-1400557 (Counterclockwise)

Preceding gene: 187928398

Following gene: 187928393

Centisome position: 35.55

GC content: 63.49

Gene sequence:

>945_bases
ATGGGAATTGGCGTATTGTGCGCCCTGCTGGCCGGGGCGATGTGGGGCATGGTCTTTATTGCTCCGCGCGCGCTGCCCGC
GTTTTCACCGTGGGAACTGACCCTCGGCCGCTACCTCGCCTACGGCGTCATCGCAGCCATTGCCGCTGCCCCGATCCTTC
CGCGCATTGCCCGCAAAATTACCCGCGCCGACTGCTTGGCGCTGGTCAGGCAATCCTGCAGCGGCAACCTTGTCTATTTT
GTTTTCGTGGCGTTTGGCGTGCAGCTGGCTGGTGTTGCGCCCACCTCGCTGATCGTTGGCATTCTGCCCATCACAATCAC
CATGCTTGGCCGGCGCGATCATGGCGCCGTGCCGCTCTCCCGGCTGATCTGGCCGCTCCTGGTTGTCGCTGCCGGCATCG
CCTGCATCAACGTTGACCTGTTCGGCCAGACAGCGGCAACGGCGGCCACCAACATCCGGCCGGTCTGGCAACGCATTGTT
GGCATCGCTTGCGCGGCAGGCGCGCTTTTCAGCTGGACGTGGTACGCCTTGGACAACGCCCGCTACCTGCAGCGCAATCC
GCATTTCTCCAGCAACGAATGGTCTGCGCTGTACGGCATTTCGAGCGGCATCCTGTCTGCCGCCTTGACCATGGCGGCCC
TGCTTGCAGTCGGCACAAGCTGGATGGATACCGGCGGACGCGTCTGGGGCACGTTCTGGACCGTGAACGCTGCCGTGGCA
CTGGGCGCGTCGCTGATCGGCAACAATCTGTGGAACATCGCCTCCCGGCGGCTGCCGCTCACGCTGTCGGGCCAGATGAT
CGTGTTCGAGACCCTGTTCGCGCTGGCATATGGCTTTGTGTACGACGATCGCTGGCCGCGCCCGCTTGAGATGGCCGCAA
TCGCCTTGCTGATCTTGGGTGTCGGCTGGTCGGTGCGCTTGCACGCCAACAAGAAGTCTGCATAA

Upstream 100 bases:

>100_bases
TAGAGACCCGTGCTATGCTCGATAAATTTTTCTTCGCGCACGCACCTACAGCACCCTGCGCCACCAGCGGCCGCGCAGAA
TCAGCCTCGCGAGTGTTCGA

Downstream 100 bases:

>100_bases
ACTGGGCGCCTTGCCGGGGGGCGAGTCGACAGGCCAAGCCAGGCCGTCGGCCTAGATTGGCGAGTGGCGATCACGCCACC
GGGCTCCCGTGCGCGTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MGIGVLCALLAGAMWGMVFIAPRALPAFSPWELTLGRYLAYGVIAAIAAAPILPRIARKITRADCLALVRQSCSGNLVYF
VFVAFGVQLAGVAPTSLIVGILPITITMLGRRDHGAVPLSRLIWPLLVVAAGIACINVDLFGQTAATAATNIRPVWQRIV
GIACAAGALFSWTWYALDNARYLQRNPHFSSNEWSALYGISSGILSAALTMAALLAVGTSWMDTGGRVWGTFWTVNAAVA
LGASLIGNNLWNIASRRLPLTLSGQMIVFETLFALAYGFVYDDRWPRPLEMAAIALLILGVGWSVRLHANKKSA

Sequences:

>Translated_314_residues
MGIGVLCALLAGAMWGMVFIAPRALPAFSPWELTLGRYLAYGVIAAIAAAPILPRIARKITRADCLALVRQSCSGNLVYF
VFVAFGVQLAGVAPTSLIVGILPITITMLGRRDHGAVPLSRLIWPLLVVAAGIACINVDLFGQTAATAATNIRPVWQRIV
GIACAAGALFSWTWYALDNARYLQRNPHFSSNEWSALYGISSGILSAALTMAALLAVGTSWMDTGGRVWGTFWTVNAAVA
LGASLIGNNLWNIASRRLPLTLSGQMIVFETLFALAYGFVYDDRWPRPLEMAAIALLILGVGWSVRLHANKKSA
>Mature_313_residues
GIGVLCALLAGAMWGMVFIAPRALPAFSPWELTLGRYLAYGVIAAIAAAPILPRIARKITRADCLALVRQSCSGNLVYFV
FVAFGVQLAGVAPTSLIVGILPITITMLGRRDHGAVPLSRLIWPLLVVAAGIACINVDLFGQTAATAATNIRPVWQRIVG
IACAAGALFSWTWYALDNARYLQRNPHFSSNEWSALYGISSGILSAALTMAALLAVGTSWMDTGGRVWGTFWTVNAAVAL
GASLIGNNLWNIASRRLPLTLSGQMIVFETLFALAYGFVYDDRWPRPLEMAAIALLILGVGWSVRLHANKKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI226510990, Length=324, Percent_Identity=31.4814814814815, Blast_Score=137, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33616; Mature: 33485

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIGVLCALLAGAMWGMVFIAPRALPAFSPWELTLGRYLAYGVIAAIAAAPILPRIARKI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRADCLALVRQSCSGNLVYFVFVAFGVQLAGVAPTSLIVGILPITITMLGRRDHGAVPLS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH
RLIWPLLVVAAGIACINVDLFGQTAATAATNIRPVWQRIVGIACAAGALFSWTWYALDNA
HHHHHHHHHHCCHHHEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEECCC
RYLQRNPHFSSNEWSALYGISSGILSAALTMAALLAVGTSWMDTGGRVWGTFWTVNAAVA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEHHHHHHHHHH
LGASLIGNNLWNIASRRLPLTLSGQMIVFETLFALAYGFVYDDRWPRPLEMAAIALLILG
HHHHHHHCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VGWSVRLHANKKSA
CCCEEEEECCCCCC
>Mature Secondary Structure 
GIGVLCALLAGAMWGMVFIAPRALPAFSPWELTLGRYLAYGVIAAIAAAPILPRIARKI
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRADCLALVRQSCSGNLVYFVFVAFGVQLAGVAPTSLIVGILPITITMLGRRDHGAVPLS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH
RLIWPLLVVAAGIACINVDLFGQTAATAATNIRPVWQRIVGIACAAGALFSWTWYALDNA
HHHHHHHHHHCCHHHEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEECCC
RYLQRNPHFSSNEWSALYGISSGILSAALTMAALLAVGTSWMDTGGRVWGTFWTVNAAVA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEHHHHHHHHHH
LGASLIGNNLWNIASRRLPLTLSGQMIVFETLFALAYGFVYDDRWPRPLEMAAIALLILG
HHHHHHHCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VGWSVRLHANKKSA
CCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]