Click here to switch to the map view.

The map label for this gene is qmcA [H]

Identifier: 187928389

GI number: 187928389

Start: 1397549

End: 1398475

Strand: Direct

Name: qmcA [H]

Synonym: Rpic_1300

Alternate gene names: 187928389

Gene position: 1397549-1398475 (Clockwise)

Preceding gene: 187928388

Following gene: 187928391

Centisome position: 35.45

GC content: 61.38

Gene sequence:

>927_bases
ATGTTCGAGCTGGGGACTCTCGCGATCATCGTCCTGTTTGCCGCCATCGTGCTCATTGCACAAGGCGTCAAGATCGTGCC
GCAACAGCACGCCTGGATTCTGGAGCGGCTGGGCAAGTATCACGCAACGCTCTCGCCGGGGCTCAATATCGTGCTGCCCT
TTGTTGATCGCGTGGCTTACAAGCACGTGCTCAAGGAAATCCCGCTCGACGTGCCGAGCCAGATCTGTATCACCAAGGAC
AACACGCAGCTGCAGGTGGACGGCATCCTGTACTTCCAGGTGACCGACCCGATGCGGGCATCGTATGGCTCCAGCAATTT
CGTGATCGCCATCACCCAGCTGGCGCAGACGACGCTGCGCTCGGTGGTCGGCAAGCTCGAACTGGACAAGACGTTCGAAG
AGCGTGACTTCATCAACCACAGCGTGGTCAATGCGCTGGATGAGGCGGCATCGAACTGGGGGGTGAAGGTGCTGCGCTAC
GAAATCAAGGATCTGACCCCGCCGAAGGAAATCCTGCACGCCATGCAGGCGCAGATCACGGCCGAACGCGAAAAGCGTGC
GCTGATCGCCGCATCCGAAGGCAAGCGCCAGGAGCAGATCAACCTGGCATCCGGTGCGCGCGAGGCCGCCATCCAGAAAT
CGGAAGGGGAAAGGCAGGCTGCCATCAACAAGGCGCAGGGCGAAGCGGCGGCGATTCTGGCGGTGGCCGAAGCGAACGCC
CAGGCGATCCAGAAGATCGGTCAGGCCATTCGCACCGAGGGCGGTGTCGATGCCGTCAACCTGAAAGTGGCGGAAGAGTA
TGTGAGCGCGTTCGGCAACCTGGCCAAGCAGGGCAACACGCTCATCGTGCCGGGGAACATGGGCGACCTGAGCACGATGA
TTGCGTCAGCGTTGACGATCGTGAAGCAGCAGCGGCCGAGCGCGTAA

Upstream 100 bases:

>100_bases
TTCCGGATCGTCGAAGTACGTGGCAACGTGCTTGTTGTCGCGCCCAGATAGCCATCAGCAACAACCAACAACAACCAGCA
AGCCCAACCACGGAGGTTCT

Downstream 100 bases:

>100_bases
AGTTCGGAGCGGGAGGGCTCAAGCCTTCTCGCGCATGAGGCGGGCTTTTTCGCGCTGCCAGTCGCGGTCCTTCTCGGTTT
CGCGCTTGTCGAACTGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MFELGTLAIIVLFAAIVLIAQGVKIVPQQHAWILERLGKYHATLSPGLNIVLPFVDRVAYKHVLKEIPLDVPSQICITKD
NTQLQVDGILYFQVTDPMRASYGSSNFVIAITQLAQTTLRSVVGKLELDKTFEERDFINHSVVNALDEAASNWGVKVLRY
EIKDLTPPKEILHAMQAQITAEREKRALIAASEGKRQEQINLASGAREAAIQKSEGERQAAINKAQGEAAAILAVAEANA
QAIQKIGQAIRTEGGVDAVNLKVAEEYVSAFGNLAKQGNTLIVPGNMGDLSTMIASALTIVKQQRPSA

Sequences:

>Translated_308_residues
MFELGTLAIIVLFAAIVLIAQGVKIVPQQHAWILERLGKYHATLSPGLNIVLPFVDRVAYKHVLKEIPLDVPSQICITKD
NTQLQVDGILYFQVTDPMRASYGSSNFVIAITQLAQTTLRSVVGKLELDKTFEERDFINHSVVNALDEAASNWGVKVLRY
EIKDLTPPKEILHAMQAQITAEREKRALIAASEGKRQEQINLASGAREAAIQKSEGERQAAINKAQGEAAAILAVAEANA
QAIQKIGQAIRTEGGVDAVNLKVAEEYVSAFGNLAKQGNTLIVPGNMGDLSTMIASALTIVKQQRPSA
>Mature_308_residues
MFELGTLAIIVLFAAIVLIAQGVKIVPQQHAWILERLGKYHATLSPGLNIVLPFVDRVAYKHVLKEIPLDVPSQICITKD
NTQLQVDGILYFQVTDPMRASYGSSNFVIAITQLAQTTLRSVVGKLELDKTFEERDFINHSVVNALDEAASNWGVKVLRY
EIKDLTPPKEILHAMQAQITAEREKRALIAASEGKRQEQINLASGAREAAIQKSEGERQAAINKAQGEAAAILAVAEANA
QAIQKIGQAIRTEGGVDAVNLKVAEEYVSAFGNLAKQGNTLIVPGNMGDLSTMIASALTIVKQQRPSA

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=278, Percent_Identity=49.6402877697842, Blast_Score=276, Evalue=1e-74,
Organism=Homo sapiens, GI221316744, Length=208, Percent_Identity=34.1346153846154, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI21686995, Length=208, Percent_Identity=34.1346153846154, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI38016911, Length=214, Percent_Identity=34.5794392523364, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI7657615, Length=182, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI1786697, Length=295, Percent_Identity=41.6949152542373, Blast_Score=235, Evalue=3e-63,
Organism=Escherichia coli, GI1790616, Length=214, Percent_Identity=24.2990654205607, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI32564147, Length=281, Percent_Identity=46.9750889679715, Blast_Score=283, Evalue=1e-76,
Organism=Caenorhabditis elegans, GI17569493, Length=221, Percent_Identity=31.6742081447964, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI193209764, Length=221, Percent_Identity=31.6742081447964, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17569497, Length=212, Percent_Identity=32.0754716981132, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71989948, Length=155, Percent_Identity=34.8387096774194, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71989955, Length=155, Percent_Identity=34.8387096774194, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI193210507, Length=197, Percent_Identity=30.9644670050761, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17570161, Length=197, Percent_Identity=30.9644670050761, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71987612, Length=163, Percent_Identity=29.4478527607362, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI25153583, Length=163, Percent_Identity=29.4478527607362, Blast_Score=88, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17569499, Length=201, Percent_Identity=32.3383084577114, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI71987621, Length=166, Percent_Identity=28.9156626506024, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17570459, Length=203, Percent_Identity=31.0344827586207, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI32566490, Length=170, Percent_Identity=31.7647058823529, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI45550506, Length=282, Percent_Identity=48.936170212766, Blast_Score=274, Evalue=4e-74,
Organism=Drosophila melanogaster, GI45556022, Length=167, Percent_Identity=34.7305389221557, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI18860517, Length=211, Percent_Identity=32.2274881516588, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI62484448, Length=151, Percent_Identity=33.7748344370861, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI62484274, Length=151, Percent_Identity=33.7748344370861, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281365664, Length=169, Percent_Identity=31.3609467455621, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24657857, Length=178, Percent_Identity=30.3370786516854, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21356845, Length=187, Percent_Identity=25.1336898395722, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI28573263, Length=198, Percent_Identity=24.2424242424242, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281361631, Length=193, Percent_Identity=25.9067357512953, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281361633, Length=193, Percent_Identity=25.9067357512953, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 33401; Mature: 33401

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFELGTLAIIVLFAAIVLIAQGVKIVPQQHAWILERLGKYHATLSPGLNIVLPFVDRVAY
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
KHVLKEIPLDVPSQICITKDNTQLQVDGILYFQVTDPMRASYGSSNFVIAITQLAQTTLR
HHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEEECCCHHHCCCCCCEEEEHHHHHHHHHH
SVVGKLELDKTFEERDFINHSVVNALDEAASNWGVKVLRYEIKDLTPPKEILHAMQAQIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHHHHH
AEREKRALIAASEGKRQEQINLASGAREAAIQKSEGERQAAINKAQGEAAAILAVAEANA
HHHHHHEEEEECCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEHHCCH
QAIQKIGQAIRTEGGVDAVNLKVAEEYVSAFGNLAKQGNTLIVPGNMGDLSTMIASALTI
HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH
VKQQRPSA
HHHCCCCC
>Mature Secondary Structure
MFELGTLAIIVLFAAIVLIAQGVKIVPQQHAWILERLGKYHATLSPGLNIVLPFVDRVAY
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
KHVLKEIPLDVPSQICITKDNTQLQVDGILYFQVTDPMRASYGSSNFVIAITQLAQTTLR
HHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEEECCCHHHCCCCCCEEEEHHHHHHHHHH
SVVGKLELDKTFEERDFINHSVVNALDEAASNWGVKVLRYEIKDLTPPKEILHAMQAQIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHHHHH
AEREKRALIAASEGKRQEQINLASGAREAAIQKSEGERQAAINKAQGEAAAILAVAEANA
HHHHHHEEEEECCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEHHCCH
QAIQKIGQAIRTEGGVDAVNLKVAEEYVSAFGNLAKQGNTLIVPGNMGDLSTMIASALTI
HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH
VKQQRPSA
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]